RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 ZMYM4Q5VZL5 1548 aa31.9■■■□□ 2.7
IRF3-222ENST00000599144 HECW1Q76N89 1606 aa31.88■■■□□ 2.69
IRF3-222ENST00000599144 FBXO41Q8TF61 875 aa31.86■■■□□ 2.69
IRF3-222ENST00000599144 POGZQ7Z3K3 1410 aa31.85■■■□□ 2.69
IRF3-222ENST00000599144 CHIC1Q5VXU3 224 aa31.85■■■□□ 2.69
IRF3-222ENST00000599144 FMN1Q68DA7 1419 aa31.83■■■□□ 2.69
IRF3-222ENST00000599144 MAGI2Q86UL8 1455 aa31.79■■■□□ 2.68
IRF3-222ENST00000599144 EFCAB2Q5VUJ9 269 aa31.79■■■□□ 2.68
IRF3-222ENST00000599144 KIF14Q15058 1648 aa31.78■■■□□ 2.68
IRF3-222ENST00000599144 CDK11AQ9UQ88 783 aaPredicted RBP31.74■■■□□ 2.67
IRF3-222ENST00000599144 AFAP1Q8N556 730 aa31.72■■■□□ 2.67
IRF3-222ENST00000599144 TROQ12816 1431 aaPredicted RBP31.72■■■□□ 2.67
IRF3-222ENST00000599144 ATP10AO60312 1499 aa31.72■■■□□ 2.67
IRF3-222ENST00000599144 CEBPAP49715 358 aaPredicted RBP31.69■■■□□ 2.66
IRF3-222ENST00000599144 C9orf84Q5VXU9 1444 aa31.68■■■□□ 2.66
IRF3-222ENST00000599144 MYO5CQ9NQX4 1742 aa31.68■■■□□ 2.66
IRF3-222ENST00000599144 ARHGAP5Q13017 1502 aa31.68■■■□□ 2.66
IRF3-222ENST00000599144 MYT1LQ9UL68 1186 aa31.66■■■□□ 2.66
IRF3-222ENST00000599144 FER1L4A9Z1Z3 1794 aa31.64■■■□□ 2.66
IRF3-222ENST00000599144 ARHGEF12Q9NZN5 1544 aa31.64■■■□□ 2.66
IRF3-222ENST00000599144 CLIP1P30622 1438 aa31.62■■■□□ 2.65
IRF3-222ENST00000599144 LRRIQ1Q96JM4 1722 aa31.62■■■□□ 2.65
IRF3-222ENST00000599144 ZNF518AQ6AHZ1 1483 aa31.6■■■□□ 2.65
IRF3-222ENST00000599144 KDM5CP41229 1560 aa31.55■■■□□ 2.64
IRF3-222ENST00000599144 TRAPPC8Q9Y2L5 1435 aa31.53■■■□□ 2.64
IRF3-222ENST00000599144 DIP2CQ9Y2E4 1556 aa31.51■■■□□ 2.64
IRF3-222ENST00000599144 CASKIN1Q8WXD9 1431 aa31.5■■■□□ 2.63
IRF3-222ENST00000599144 CERKQ8TCT0 537 aa31.48■■■□□ 2.63
IRF3-222ENST00000599144 CDC42BPBQ9Y5S2 1711 aa31.48■■■□□ 2.63
IRF3-222ENST00000599144 ABCA6Q8N139 1617 aa31.46■■■□□ 2.63
IRF3-222ENST00000599144 ABCC1P33527 1531 aa31.44■■■□□ 2.62
IRF3-222ENST00000599144 CCDC18Q5T9S5 1454 aa31.44■■■□□ 2.62
IRF3-222ENST00000599144 MLH3Q9UHC1 1453 aa31.43■■■□□ 2.62
IRF3-222ENST00000599144 PREX2Q70Z35 1606 aa31.42■■■□□ 2.62
IRF3-222ENST00000599144 ZNF777Q9ULD5 760 aaPredicted RBP31.42■■■□□ 2.62
IRF3-222ENST00000599144 PREX1Q8TCU6 1659 aa31.4■■■□□ 2.62
IRF3-222ENST00000599144 UHRF1BP1Q6BDS2 1440 aa31.37■■■□□ 2.61
IRF3-222ENST00000599144 REREQ9P2R6 1566 aa31.36■■■□□ 2.61
IRF3-222ENST00000599144 ITSN2Q9NZM3 1697 aa31.35■■■□□ 2.61
IRF3-222ENST00000599144 ESF1Q9H501 851 aaKnown RBP31.33■■■□□ 2.61
IRF3-222ENST00000599144 FYCO1Q9BQS8 1478 aa31.33■■■□□ 2.61
IRF3-222ENST00000599144 AGLP35573 1532 aa31.31■■■□□ 2.6
IRF3-222ENST00000599144 HNRNPMP52272 730 aaKnown RBP eCLIP31.31■■■□□ 2.6
IRF3-222ENST00000599144 CDC42BPAQ5VT25 1732 aa31.3■■■□□ 2.6
IRF3-222ENST00000599144 KIDINS220Q9ULH0 1771 aa31.29■■■□□ 2.6
IRF3-222ENST00000599144 C3P01024 1663 aa31.28■■■□□ 2.6
IRF3-222ENST00000599144 GPATCH8Q9UKJ3 1502 aaKnown RBP31.28■■■□□ 2.6
IRF3-222ENST00000599144 STRCQ7RTU9 1775 aa31.28■■■□□ 2.6
IRF3-222ENST00000599144 SAMD9LQ8IVG5 1584 aa31.27■■■□□ 2.6
IRF3-222ENST00000599144 SYCP2Q9BX26 1530 aa31.27■■■□□ 2.6
IRF3-222ENST00000599144 SPAG9O60271 1321 aaKnown RBP31.24■■■□□ 2.59
IRF3-222ENST00000599144 DMRT2Q9Y5R5 561 aa31.23■■■□□ 2.59
IRF3-222ENST00000599144 CFDP1Q9UEE9 299 aaPredicted RBP31.19■■■□□ 2.58
IRF3-222ENST00000599144 CCNB3Q8WWL7 1395 aa31.16■■■□□ 2.58
IRF3-222ENST00000599144 CNTLNQ9NXG0 1405 aa31.15■■■□□ 2.58
IRF3-222ENST00000599144 ZNF644Q9H582 1327 aaPredicted RBP31.13■■■□□ 2.57
IRF3-222ENST00000599144 ZMYM3Q14202 1370 aa31.12■■■□□ 2.57
IRF3-222ENST00000599144 MTUS2Q5JR59 1369 aa31.12■■■□□ 2.57
IRF3-222ENST00000599144 PTPRTO14522 1441 aa31.12■■■□□ 2.57
IRF3-222ENST00000599144 ATP7AQ04656 1500 aa31.11■■■□□ 2.57
IRF3-222ENST00000599144 SUPT6HQ7KZ85 1726 aaKnown RBP31.1■■■□□ 2.57
IRF3-222ENST00000599144 NCOA1Q15788 1441 aa31.09■■■□□ 2.57
IRF3-222ENST00000599144 SETD1BQ9UPS6 1966 aaKnown RBP31.09■■■□□ 2.57
IRF3-222ENST00000599144 KIAA1107Q9UPP5 1409 aa31.08■■■□□ 2.57
IRF3-222ENST00000599144 GGT6Q6P531 493 aa31.08■■■□□ 2.57
IRF3-222ENST00000599144 A2MP01023 1474 aa31.08■■■□□ 2.57
IRF3-222ENST00000599144 INO80Q9ULG1 1556 aaPredicted RBP31.05■■■□□ 2.56
IRF3-222ENST00000599144 NCKAP5LQ9HCH0 1330 aa31.05■■■□□ 2.56
IRF3-222ENST00000599144 PLEKHH2Q8IVE3 1493 aa31.04■■■□□ 2.56
IRF3-222ENST00000599144 NPATQ14207 1427 aa31.03■■■□□ 2.56
IRF3-222ENST00000599144 CAMSAP1Q5T5Y3 1602 aa31.02■■■□□ 2.56
IRF3-222ENST00000599144 PLXNC1O60486 1568 aa31.02■■■□□ 2.56
IRF3-222ENST00000599144 LTBP4Q8N2S1 1624 aa31.02■■■□□ 2.56
IRF3-222ENST00000599144 CLTCQ00610 1675 aaKnown RBP31■■■□□ 2.55
IRF3-222ENST00000599144 TIAM1Q13009 1591 aa30.99■■■□□ 2.55
IRF3-222ENST00000599144 MROH2AA6NES4 1674 aa30.98■■■□□ 2.55
IRF3-222ENST00000599144 PTPRKQ15262 1439 aa30.97■■■□□ 2.55
IRF3-222ENST00000599144 DISP3Q9P2K9 1392 aa30.96■■■□□ 2.55
IRF3-222ENST00000599144 MBD5Q9P267 1494 aa30.95■■■□□ 2.55
IRF3-222ENST00000599144 ILDR2Q71H61 639 aa30.93■■■□□ 2.54
IRF3-222ENST00000599144 ZNF335Q9H4Z2 1342 aaPredicted RBP30.93■■■□□ 2.54
IRF3-222ENST00000599144 EHBP1L1Q8N3D4 1523 aa30.93■■■□□ 2.54
IRF3-222ENST00000599144 CEP162Q5TB80 1403 aa30.9■■■□□ 2.54
IRF3-222ENST00000599144 MYO3AQ8NEV4 1616 aa30.9■■■□□ 2.54
IRF3-222ENST00000599144 CEP170BQ9Y4F5 1589 aaPredicted RBP30.86■■■□□ 2.53
IRF3-222ENST00000599144 DHX29Q7Z478 1369 aaKnown RBP30.83■■■□□ 2.53
IRF3-222ENST00000599144 FBXO31Q5XUX0 539 aaPredicted RBP30.83■■■□□ 2.53
IRF3-222ENST00000599144 ADGBQ8N7X0 1667 aa30.83■■■□□ 2.53
IRF3-222ENST00000599144 KIF3BO15066 747 aa30.82■■■□□ 2.52
IRF3-222ENST00000599144 NCOA2Q15596 1464 aa30.82■■■□□ 2.52
IRF3-222ENST00000599144 RTEL1-TNFRSF6BF6WH68 1400 aa30.81■■■□□ 2.52
IRF3-222ENST00000599144 ZNF142P52746 1687 aaPredicted RBP30.81■■■□□ 2.52
IRF3-222ENST00000599144 PKD2Q13563 968 aa30.8■■■□□ 2.52
IRF3-222ENST00000599144 PLA2R1Q13018 1463 aa30.8■■■□□ 2.52
IRF3-222ENST00000599144 TCOF1Q13428 1488 aaKnown RBP30.8■■■□□ 2.52
IRF3-222ENST00000599144 PPP6R1Q9UPN7 881 aa30.79■■■□□ 2.52
IRF3-222ENST00000599144 CAMSAP2Q08AD1 1489 aa30.78■■■□□ 2.52
IRF3-222ENST00000599144 IQSEC2Q5JU85 1478 aa30.77■■■□□ 2.52
IRF3-222ENST00000599144 CCDC141Q6ZP82 1450 aa30.77■■■□□ 2.52
IRF3-222ENST00000599144 UBAP1LF5GYI3 381 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms