RNA–Protein interactions for RNA: ENST00000598708.1

LRMDA-214, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-214ENST00000598708 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
LRMDA-214ENST00000598708 CCER1Q8TC90 406 aaPredicted RBP11.96□□□□□ -0.49
LRMDA-214ENST00000598708 FRMPD1Q5SYB0 1578 aa11.96□□□□□ -0.5
LRMDA-214ENST00000598708 PLCH2O75038 1416 aa11.95□□□□□ -0.5
LRMDA-214ENST00000598708 PHLDB1Q86UU1 1377 aa11.95□□□□□ -0.5
LRMDA-214ENST00000598708 ATP1B4Q9UN42 357 aaPredicted RBP11.95□□□□□ -0.5
LRMDA-214ENST00000598708 FANCAO15360 1455 aa11.93□□□□□ -0.5
LRMDA-214ENST00000598708 LRRC9Q6ZRR7 1453 aa11.91□□□□□ -0.5
LRMDA-214ENST00000598708 AKNAQ7Z591 1439 aa11.9□□□□□ -0.5
LRMDA-214ENST00000598708 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
LRMDA-214ENST00000598708 ABCC1P33527 1531 aa11.9□□□□□ -0.5
LRMDA-214ENST00000598708 ZMYM4Q5VZL5 1548 aa11.9□□□□□ -0.5
LRMDA-214ENST00000598708 GPATCH8Q9UKJ3 1502 aaKnown RBP11.9□□□□□ -0.5
LRMDA-214ENST00000598708 ARHGAP5Q13017 1502 aa11.89□□□□□ -0.51
LRMDA-214ENST00000598708 MTUS2Q5JR59 1369 aa11.89□□□□□ -0.51
LRMDA-214ENST00000598708 KDM5CP41229 1560 aa11.88□□□□□ -0.51
LRMDA-214ENST00000598708 NCOA2Q15596 1464 aa11.87□□□□□ -0.51
LRMDA-214ENST00000598708 ADGRL1O94910 1474 aa11.86□□□□□ -0.51
LRMDA-214ENST00000598708 DENND4BO75064 1496 aaPredicted RBP11.85□□□□□ -0.51
LRMDA-214ENST00000598708 RRBP1Q9P2E9 1410 aaKnown RBP11.85□□□□□ -0.51
LRMDA-214ENST00000598708 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
LRMDA-214ENST00000598708 SIGLEC1Q9BZZ2 1709 aa11.84□□□□□ -0.51
LRMDA-214ENST00000598708 ARHGEF12Q9NZN5 1544 aa11.84□□□□□ -0.51
LRMDA-214ENST00000598708 KIDINS220Q9ULH0 1771 aa11.84□□□□□ -0.51
LRMDA-214ENST00000598708 POGZQ7Z3K3 1410 aa11.84□□□□□ -0.51
LRMDA-214ENST00000598708 ARHGEF40Q8TER5 1519 aa11.83□□□□□ -0.52
LRMDA-214ENST00000598708 HECW2Q9P2P5 1572 aa11.83□□□□□ -0.52
LRMDA-214ENST00000598708 KANK4Q5T7N3 995 aaPredicted RBP11.82□□□□□ -0.52
LRMDA-214ENST00000598708 EFCAB2Q5VUJ9 269 aa11.82□□□□□ -0.52
LRMDA-214ENST00000598708 ZNF518AQ6AHZ1 1483 aa11.82□□□□□ -0.52
LRMDA-214ENST00000598708 MAGI2Q86UL8 1455 aa11.82□□□□□ -0.52
LRMDA-214ENST00000598708 SYCP2Q9BX26 1530 aa11.81□□□□□ -0.52
LRMDA-214ENST00000598708 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
LRMDA-214ENST00000598708 INO80Q9ULG1 1556 aaPredicted RBP11.81□□□□□ -0.52
LRMDA-214ENST00000598708 SCAPERQ9BY12 1400 aa11.81□□□□□ -0.52
LRMDA-214ENST00000598708 CROCC2H7BZ55 1655 aa11.81□□□□□ -0.52
LRMDA-214ENST00000598708 KIAA1107Q9UPP5 1409 aa11.8□□□□□ -0.52
LRMDA-214ENST00000598708 PLEKHH2Q8IVE3 1493 aa11.8□□□□□ -0.52
LRMDA-214ENST00000598708 ARHGEF5Q12774 1597 aa11.79□□□□□ -0.52
LRMDA-214ENST00000598708 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
LRMDA-214ENST00000598708 ABCA6Q8N139 1617 aa11.79□□□□□ -0.52
LRMDA-214ENST00000598708 ZFYVE16Q7Z3T8 1539 aa11.79□□□□□ -0.52
LRMDA-214ENST00000598708 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
LRMDA-214ENST00000598708 MLH3Q9UHC1 1453 aa11.78□□□□□ -0.52
LRMDA-214ENST00000598708 RAPGEF3O95398 923 aa11.78□□□□□ -0.52
LRMDA-214ENST00000598708 DIP2CQ9Y2E4 1556 aa11.78□□□□□ -0.52
LRMDA-214ENST00000598708 MYOM3Q5VTT5 1437 aa11.77□□□□□ -0.52
LRMDA-214ENST00000598708 MIA2Q96PC5 1412 aa11.77□□□□□ -0.52
LRMDA-214ENST00000598708 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.52
LRMDA-214ENST00000598708 CAMSAP2Q08AD1 1489 aa11.77□□□□□ -0.52
LRMDA-214ENST00000598708 MBD5Q9P267 1494 aa11.77□□□□□ -0.52
LRMDA-214ENST00000598708 PTPN23Q9H3S7 1636 aa11.77□□□□□ -0.53
LRMDA-214ENST00000598708 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.53
LRMDA-214ENST00000598708 ADAMTSL3P82987 1691 aa11.76□□□□□ -0.53
LRMDA-214ENST00000598708 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
LRMDA-214ENST00000598708 CFDP1Q9UEE9 299 aaPredicted RBP11.75□□□□□ -0.53
LRMDA-214ENST00000598708 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
LRMDA-214ENST00000598708 YEATS2Q9ULM3 1422 aa11.74□□□□□ -0.53
LRMDA-214ENST00000598708 ATP7AQ04656 1500 aa11.74□□□□□ -0.53
LRMDA-214ENST00000598708 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
LRMDA-214ENST00000598708 PLXNC1O60486 1568 aa11.73□□□□□ -0.53
LRMDA-214ENST00000598708 CCDC141Q6ZP82 1450 aa11.71□□□□□ -0.53
LRMDA-214ENST00000598708 ZNF644Q9H582 1327 aaPredicted RBP11.71□□□□□ -0.53
LRMDA-214ENST00000598708 AFAP1Q8N556 730 aa11.71□□□□□ -0.53
LRMDA-214ENST00000598708 FER1L4A9Z1Z3 1794 aa11.71□□□□□ -0.54
LRMDA-214ENST00000598708 AGLP35573 1532 aa11.7□□□□□ -0.54
LRMDA-214ENST00000598708 ATP10AO60312 1499 aa11.7□□□□□ -0.54
LRMDA-214ENST00000598708 RTEL1-TNFRSF6BF6WH68 1400 aa11.7□□□□□ -0.54
LRMDA-214ENST00000598708 FGD6Q6ZV73 1430 aa11.7□□□□□ -0.54
LRMDA-214ENST00000598708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.7□□□□□ -0.54
LRMDA-214ENST00000598708 C9orf84Q5VXU9 1444 aa11.69□□□□□ -0.54
LRMDA-214ENST00000598708 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
LRMDA-214ENST00000598708 HNRNPMP52272 730 aaKnown RBP eCLIP11.68□□□□□ -0.545e-6■■■□□ 17.7
LRMDA-214ENST00000598708 MADDQ8WXG6 1647 aa11.68□□□□□ -0.54
LRMDA-214ENST00000598708 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
LRMDA-214ENST00000598708 RSPH4AQ5TD94 716 aa11.67□□□□□ -0.54
LRMDA-214ENST00000598708 SHANK2Q9UPX8 1470 aa11.67□□□□□ -0.54
LRMDA-214ENST00000598708 DHX57Q6P158 1386 aaKnown RBP11.67□□□□□ -0.54
LRMDA-214ENST00000598708 EIF2AK4Q9P2K8 1649 aaKnown RBP11.66□□□□□ -0.54
LRMDA-214ENST00000598708 MROH2AA6NES4 1674 aa11.65□□□□□ -0.54
LRMDA-214ENST00000598708 RIMS1Q86UR5 1692 aaKnown RBP11.65□□□□□ -0.54
LRMDA-214ENST00000598708 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
LRMDA-214ENST00000598708 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
LRMDA-214ENST00000598708 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
LRMDA-214ENST00000598708 ABCC5O15440 1437 aa11.63□□□□□ -0.55
LRMDA-214ENST00000598708 DAPK1P53355 1430 aa11.63□□□□□ -0.55
LRMDA-214ENST00000598708 RNF17Q9BXT8 1623 aaKnown RBP11.63□□□□□ -0.55
LRMDA-214ENST00000598708 A2MP01023 1474 aa11.63□□□□□ -0.55
LRMDA-214ENST00000598708 C3P01024 1663 aa11.62□□□□□ -0.55
LRMDA-214ENST00000598708 DEPDC5O75140 1603 aa11.61□□□□□ -0.55
LRMDA-214ENST00000598708 ADGRL2O95490 1459 aa11.61□□□□□ -0.55
LRMDA-214ENST00000598708 CLTCQ00610 1675 aaKnown RBP11.6□□□□□ -0.55
LRMDA-214ENST00000598708 MROH1Q8NDA8 1641 aa11.6□□□□□ -0.55
LRMDA-214ENST00000598708 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
LRMDA-214ENST00000598708 DUOX2Q9NRD8 1548 aa11.59□□□□□ -0.55
LRMDA-214ENST00000598708 FAM135AQ9P2D6 1515 aa11.59□□□□□ -0.55
LRMDA-214ENST00000598708 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.56
LRMDA-214ENST00000598708 SETD5Q9C0A6 1442 aa11.58□□□□□ -0.56
LRMDA-214ENST00000598708 PTPRMP28827 1452 aa11.57□□□□□ -0.56
LRMDA-214ENST00000598708 SETD1BQ9UPS6 1966 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms