RNA–Protein interactions for RNA: ENST00000598346.5

FARP1-223, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-223ENST00000598346 TMEM121BQ9BXQ6 578 aaPredicted RBP13.68□□□□□ -0.22
FARP1-223ENST00000598346 BOLA1Q9Y3E2 137 aa13.67□□□□□ -0.22
FARP1-223ENST00000598346 EFCAB3Q8N7B9 438 aa13.66□□□□□ -0.22
FARP1-223ENST00000598346 MFRPQ9BY79 579 aa13.66□□□□□ -0.22
FARP1-223ENST00000598346 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
FARP1-223ENST00000598346 SOX12O15370 315 aa13.63□□□□□ -0.23
FARP1-223ENST00000598346 BCANQ96GW7 911 aa13.59□□□□□ -0.23
FARP1-223ENST00000598346 FBXO22Q8NEZ5 403 aa13.57□□□□□ -0.24
FARP1-223ENST00000598346 NLRP6P59044 892 aa13.56□□□□□ -0.24
FARP1-223ENST00000598346 CDAN1Q8IWY9 1227 aa13.56□□□□□ -0.24
FARP1-223ENST00000598346 PHF8Q9UPP1 1060 aa13.56□□□□□ -0.24
FARP1-223ENST00000598346 PPP1R37O75864 691 aa13.51□□□□□ -0.25
FARP1-223ENST00000598346 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
FARP1-223ENST00000598346 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.25
FARP1-223ENST00000598346 MICALL2Q8IY33 904 aa13.45□□□□□ -0.26
FARP1-223ENST00000598346 MARVELD3Q96A59 401 aa13.44□□□□□ -0.26
FARP1-223ENST00000598346 EMP3P54852 163 aa13.43□□□□□ -0.26
FARP1-223ENST00000598346 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
FARP1-223ENST00000598346 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
FARP1-223ENST00000598346 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
FARP1-223ENST00000598346 HOXB3P14651 431 aaPredicted RBP13.38□□□□□ -0.27
FARP1-223ENST00000598346 WDR70Q9NW82 654 aa13.35□□□□□ -0.27
FARP1-223ENST00000598346 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
FARP1-223ENST00000598346 NBR1Q14596 966 aa13.33□□□□□ -0.28
FARP1-223ENST00000598346 FAM205CA6NFA0 338 aa13.31□□□□□ -0.28
FARP1-223ENST00000598346 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
FARP1-223ENST00000598346 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
FARP1-223ENST00000598346 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
FARP1-223ENST00000598346 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
FARP1-223ENST00000598346 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
FARP1-223ENST00000598346 KCNV2Q8TDN2 545 aa13.25□□□□□ -0.29
FARP1-223ENST00000598346 ERBB3P21860 1342 aa13.22□□□□□ -0.29
FARP1-223ENST00000598346 PDE4AP27815 886 aa13.22□□□□□ -0.29
FARP1-223ENST00000598346 CRISPLD2Q9H0B8 497 aa13.22□□□□□ -0.29
FARP1-223ENST00000598346 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
FARP1-223ENST00000598346 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
FARP1-223ENST00000598346 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
FARP1-223ENST00000598346 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
FARP1-223ENST00000598346 E2F4Q16254 413 aa13.18□□□□□ -0.3
FARP1-223ENST00000598346 PRKCSHP14314 528 aaPredicted RBP13.17□□□□□ -0.3
FARP1-223ENST00000598346 MFSD10Q14728 455 aa13.17□□□□□ -0.3
FARP1-223ENST00000598346 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
FARP1-223ENST00000598346 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
FARP1-223ENST00000598346 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
FARP1-223ENST00000598346 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
FARP1-223ENST00000598346 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
FARP1-223ENST00000598346 KIF3CO14782 793 aa13.14□□□□□ -0.31
FARP1-223ENST00000598346 TPRNQ4KMQ1 711 aa13.13□□□□□ -0.31
FARP1-223ENST00000598346 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
FARP1-223ENST00000598346 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
FARP1-223ENST00000598346 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
FARP1-223ENST00000598346 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
FARP1-223ENST00000598346 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
FARP1-223ENST00000598346 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
FARP1-223ENST00000598346 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
FARP1-223ENST00000598346 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
FARP1-223ENST00000598346 SLC34A2O95436 690 aa13.05□□□□□ -0.32
FARP1-223ENST00000598346 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
FARP1-223ENST00000598346 DSG2Q14126 1118 aa13.02□□□□□ -0.33
FARP1-223ENST00000598346 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
FARP1-223ENST00000598346 ARIH1Q9Y4X5 557 aaPredicted RBP13.01□□□□□ -0.33
FARP1-223ENST00000598346 FOXK1P85037 733 aa12.99□□□□□ -0.33
FARP1-223ENST00000598346 SEMA3EO15041 775 aa12.97□□□□□ -0.33
FARP1-223ENST00000598346 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
FARP1-223ENST00000598346 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.33
FARP1-223ENST00000598346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
FARP1-223ENST00000598346 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
FARP1-223ENST00000598346 TESPA1A2RU30 521 aaPredicted RBP12.93□□□□□ -0.34
FARP1-223ENST00000598346 NUDT7P0C024 238 aa12.93□□□□□ -0.34
FARP1-223ENST00000598346 PLPP6Q8IY26 295 aa12.93□□□□□ -0.34
FARP1-223ENST00000598346 PTGER2P43116 358 aa12.92□□□□□ -0.34
FARP1-223ENST00000598346 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
FARP1-223ENST00000598346 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
FARP1-223ENST00000598346 TULP1O00294 542 aaPredicted RBP12.9□□□□□ -0.34
FARP1-223ENST00000598346 PBX2P40425 430 aa12.9□□□□□ -0.34
FARP1-223ENST00000598346 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
FARP1-223ENST00000598346 DPYSL4O14531 572 aa12.88□□□□□ -0.35
FARP1-223ENST00000598346 TBC1D12O60347 775 aa12.87□□□□□ -0.35
FARP1-223ENST00000598346 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
FARP1-223ENST00000598346 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
FARP1-223ENST00000598346 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
FARP1-223ENST00000598346 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
FARP1-223ENST00000598346 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
FARP1-223ENST00000598346 PDIA6Q15084 440 aa12.82□□□□□ -0.36
FARP1-223ENST00000598346 SMYD5Q6GMV2 418 aa12.82□□□□□ -0.36
FARP1-223ENST00000598346 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
FARP1-223ENST00000598346 MLLT3P42568 568 aaPredicted RBP12.79□□□□□ -0.36
FARP1-223ENST00000598346 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
FARP1-223ENST00000598346 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
FARP1-223ENST00000598346 OXER1Q8TDS5 423 aa12.77□□□□□ -0.37
FARP1-223ENST00000598346 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
FARP1-223ENST00000598346 ARHGAP33O14559 1287 aa12.75□□□□□ -0.37
FARP1-223ENST00000598346 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
FARP1-223ENST00000598346 ZC3H15Q8WU90 426 aaKnown RBP12.73□□□□□ -0.37
FARP1-223ENST00000598346 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
FARP1-223ENST00000598346 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
FARP1-223ENST00000598346 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
FARP1-223ENST00000598346 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
FARP1-223ENST00000598346 TK2O00142 265 aa12.66□□□□□ -0.38
FARP1-223ENST00000598346 EVI5O60447 810 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms