RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 POGZQ7Z3K3 1410 aa37.02■■■■□ 3.52
SSBP4-205ENST00000598159 ARHGAP5Q13017 1502 aa37.01■■■■□ 3.52
SSBP4-205ENST00000598159 ARHGEF40Q8TER5 1519 aa37.01■■■■□ 3.52
SSBP4-205ENST00000598159 ADAMTSL3P82987 1691 aa36.96■■■■□ 3.51
SSBP4-205ENST00000598159 ZFYVE16Q7Z3T8 1539 aa36.96■■■■□ 3.51
SSBP4-205ENST00000598159 CEP162Q5TB80 1403 aa36.93■■■■□ 3.5
SSBP4-205ENST00000598159 YEATS2Q9ULM3 1422 aa36.93■■■■□ 3.5
SSBP4-205ENST00000598159 BCORL1Q5H9F3 1711 aa36.93■■■■□ 3.5
SSBP4-205ENST00000598159 CDC42BPBQ9Y5S2 1711 aa36.93■■■■□ 3.5
SSBP4-205ENST00000598159 ZNF518AQ6AHZ1 1483 aa36.89■■■■□ 3.5
SSBP4-205ENST00000598159 AFAP1Q8N556 730 aa36.88■■■■□ 3.49
SSBP4-205ENST00000598159 PREX2Q70Z35 1606 aa36.87■■■■□ 3.49
SSBP4-205ENST00000598159 PTPRMP28827 1452 aa36.86■■■■□ 3.49
SSBP4-205ENST00000598159 LOC105371045A0A1W2PR82 267 aa36.84■■■■□ 3.49
SSBP4-205ENST00000598159 ATP10AO60312 1499 aa36.83■■■■□ 3.49
SSBP4-205ENST00000598159 CDC42BPAQ5VT25 1732 aa36.81■■■■□ 3.48
SSBP4-205ENST00000598159 MTUS2Q5JR59 1369 aa36.8■■■■□ 3.48
SSBP4-205ENST00000598159 MYT1LQ9UL68 1186 aa36.8■■■■□ 3.48
SSBP4-205ENST00000598159 KDM5CP41229 1560 aa36.78■■■■□ 3.48
SSBP4-205ENST00000598159 HECW2Q9P2P5 1572 aa36.78■■■■□ 3.48
SSBP4-205ENST00000598159 MADDQ8WXG6 1647 aa36.77■■■■□ 3.48
SSBP4-205ENST00000598159 GPATCH8Q9UKJ3 1502 aaKnown RBP36.76■■■■□ 3.48
SSBP4-205ENST00000598159 C9orf84Q5VXU9 1444 aa36.76■■■■□ 3.47
SSBP4-205ENST00000598159 ZNF777Q9ULD5 760 aaPredicted RBP36.75■■■■□ 3.47
SSBP4-205ENST00000598159 ABCC1P33527 1531 aa36.74■■■■□ 3.47
SSBP4-205ENST00000598159 ARHGEF12Q9NZN5 1544 aa36.73■■■■□ 3.47
SSBP4-205ENST00000598159 SIGLEC1Q9BZZ2 1709 aa36.73■■■■□ 3.47
SSBP4-205ENST00000598159 TRAPPC8Q9Y2L5 1435 aa36.72■■■■□ 3.47
SSBP4-205ENST00000598159 MLH3Q9UHC1 1453 aa36.71■■■■□ 3.47
SSBP4-205ENST00000598159 CCNB3Q8WWL7 1395 aa36.71■■■■□ 3.47
SSBP4-205ENST00000598159 MLECQ14165 292 aa36.71■■■■□ 3.47
SSBP4-205ENST00000598159 CFDP1Q9UEE9 299 aaPredicted RBP36.7■■■■□ 3.47
SSBP4-205ENST00000598159 ITSN2Q9NZM3 1697 aa36.68■■■■□ 3.46
SSBP4-205ENST00000598159 RIMS1Q86UR5 1692 aaKnown RBP36.67■■■■□ 3.46
SSBP4-205ENST00000598159 HNRNPMP52272 730 aaKnown RBP eCLIP36.62■■■■□ 3.451e-6■■□□□ 12.6
SSBP4-205ENST00000598159 EHBP1L1Q8N3D4 1523 aa36.62■■■■□ 3.45
SSBP4-205ENST00000598159 SAMD9LQ8IVG5 1584 aa36.61■■■■□ 3.45
SSBP4-205ENST00000598159 KIAA1107Q9UPP5 1409 aa36.6■■■■□ 3.45
SSBP4-205ENST00000598159 DIP2CQ9Y2E4 1556 aa36.6■■■■□ 3.45
SSBP4-205ENST00000598159 PLEKHH2Q8IVE3 1493 aa36.59■■■■□ 3.45
SSBP4-205ENST00000598159 REREQ9P2R6 1566 aa36.57■■■■□ 3.44
SSBP4-205ENST00000598159 VPS8Q8N3P4 1428 aa36.55■■■■□ 3.44
SSBP4-205ENST00000598159 FER1L4A9Z1Z3 1794 aa36.55■■■■□ 3.44
SSBP4-205ENST00000598159 SYCP2Q9BX26 1530 aa36.54■■■■□ 3.44
SSBP4-205ENST00000598159 ABCA6Q8N139 1617 aa36.54■■■■□ 3.44
SSBP4-205ENST00000598159 KIDINS220Q9ULH0 1771 aa36.53■■■■□ 3.44
SSBP4-205ENST00000598159 PLPPR3Q6T4P5 718 aa36.53■■■■□ 3.44
SSBP4-205ENST00000598159 SPAG9O60271 1321 aaKnown RBP36.53■■■■□ 3.44
SSBP4-205ENST00000598159 TIAM1Q13009 1591 aa36.49■■■■□ 3.43
SSBP4-205ENST00000598159 AGLP35573 1532 aa36.49■■■■□ 3.43
SSBP4-205ENST00000598159 ZNF644Q9H582 1327 aaPredicted RBP36.45■■■■□ 3.43
SSBP4-205ENST00000598159 SUPT6HQ7KZ85 1726 aaKnown RBP36.44■■■■□ 3.42
SSBP4-205ENST00000598159 NCOA2Q15596 1464 aa36.42■■■■□ 3.42
SSBP4-205ENST00000598159 LMTK3Q96Q04 1460 aa36.42■■■■□ 3.42
SSBP4-205ENST00000598159 ESF1Q9H501 851 aaKnown RBP36.4■■■■□ 3.42
SSBP4-205ENST00000598159 CEBPAP49715 358 aaPredicted RBP36.38■■■■□ 3.41
SSBP4-205ENST00000598159 ATP7AQ04656 1500 aa36.37■■■■□ 3.41
SSBP4-205ENST00000598159 LRRC9Q6ZRR7 1453 aa36.36■■■■□ 3.41
SSBP4-205ENST00000598159 MBD5Q9P267 1494 aa36.36■■■■□ 3.41
SSBP4-205ENST00000598159 MAP3K1Q13233 1512 aa36.35■■■■□ 3.41
SSBP4-205ENST00000598159 RSPH4AQ5TD94 716 aa36.35■■■■□ 3.41
SSBP4-205ENST00000598159 INO80Q9ULG1 1556 aaPredicted RBP36.32■■■■□ 3.4
SSBP4-205ENST00000598159 KANK4Q5T7N3 995 aaPredicted RBP36.29■■■■□ 3.4
SSBP4-205ENST00000598159 SETD1BQ9UPS6 1966 aaKnown RBP36.29■■■■□ 3.4
SSBP4-205ENST00000598159 RTEL1-TNFRSF6BF6WH68 1400 aa36.28■■■■□ 3.4
SSBP4-205ENST00000598159 A2MP01023 1474 aa36.28■■■■□ 3.4
SSBP4-205ENST00000598159 HSPA2P54652 639 aa36.27■■■■□ 3.4
SSBP4-205ENST00000598159 CNTLNQ9NXG0 1405 aa36.25■■■■□ 3.39
SSBP4-205ENST00000598159 APLP2Q06481 763 aa36.24■■■■□ 3.39
SSBP4-205ENST00000598159 CAMSAP2Q08AD1 1489 aa36.23■■■■□ 3.39
SSBP4-205ENST00000598159 ADGBQ8N7X0 1667 aa36.2■■■■□ 3.39
SSBP4-205ENST00000598159 PLXNC1O60486 1568 aa36.19■■■■□ 3.38
SSBP4-205ENST00000598159 CCDC141Q6ZP82 1450 aa36.19■■■■□ 3.38
SSBP4-205ENST00000598159 PREX1Q8TCU6 1659 aa36.19■■■■□ 3.38
SSBP4-205ENST00000598159 C3P01024 1663 aa36.18■■■■□ 3.38
SSBP4-205ENST00000598159 TSPY4P0CV99 314 aa36.17■■■■□ 3.38
SSBP4-205ENST00000598159 TSPY10P0CW01 314 aa36.17■■■■□ 3.38
SSBP4-205ENST00000598159 PPP6R1Q9UPN7 881 aa36.17■■■■□ 3.38
SSBP4-205ENST00000598159 GGT6Q6P531 493 aa36.16■■■■□ 3.38
SSBP4-205ENST00000598159 DHX29Q7Z478 1369 aaKnown RBP36.15■■■■□ 3.38
SSBP4-205ENST00000598159 ILDR1Q86SU0 546 aaPredicted RBP36.13■■■■□ 3.37
SSBP4-205ENST00000598159 UHRF1BP1Q6BDS2 1440 aa36.13■■■■□ 3.37
SSBP4-205ENST00000598159 ZMYM3Q14202 1370 aa36.12■■■■□ 3.37
SSBP4-205ENST00000598159 ARHGEF5Q12774 1597 aa36.11■■■■□ 3.37
SSBP4-205ENST00000598159 MIA2Q96PC5 1412 aa36.1■■■■□ 3.37
SSBP4-205ENST00000598159 MROH2AA6NES4 1674 aa36.09■■■■□ 3.37
SSBP4-205ENST00000598159 MYOM3Q5VTT5 1437 aa36.08■■■■□ 3.37
SSBP4-205ENST00000598159 NPATQ14207 1427 aa36.02■■■■□ 3.36
SSBP4-205ENST00000598159 KIF3BO15066 747 aa36.02■■■■□ 3.36
SSBP4-205ENST00000598159 CLTCQ00610 1675 aaKnown RBP36■■■■□ 3.35
SSBP4-205ENST00000598159 DMRT2Q9Y5R5 561 aa35.98■■■■□ 3.35
SSBP4-205ENST00000598159 MAST1Q9Y2H9 1570 aa35.93■■■■□ 3.34
SSBP4-205ENST00000598159 PTPRKQ15262 1439 aa35.89■■■■□ 3.34
SSBP4-205ENST00000598159 STRCQ7RTU9 1775 aa35.88■■■■□ 3.33
SSBP4-205ENST00000598159 WASHC2CQ9Y4E1 1318 aa35.86■■■■□ 3.33
SSBP4-205ENST00000598159 FBXO41Q8TF61 875 aa35.86■■■■□ 3.33
SSBP4-205ENST00000598159 FAM135AQ9P2D6 1515 aa35.83■■■■□ 3.33
SSBP4-205ENST00000598159 PTPN23Q9H3S7 1636 aa35.83■■■■□ 3.33
SSBP4-205ENST00000598159 KDM5DQ9BY66 1539 aa35.79■■■■□ 3.32
SSBP4-205ENST00000598159 FGD6Q6ZV73 1430 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms