RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 ZMYM4Q5VZL5 1548 aa34.65■■■■□ 3.14
C19orf54-205ENST00000596809 ARHGEF40Q8TER5 1519 aa34.65■■■■□ 3.14
C19orf54-205ENST00000596809 CEP162Q5TB80 1403 aa34.64■■■■□ 3.14
C19orf54-205ENST00000596809 MAGI2Q86UL8 1455 aa34.64■■■■□ 3.14
C19orf54-205ENST00000596809 YEATS2Q9ULM3 1422 aa34.62■■■■□ 3.13
C19orf54-205ENST00000596809 ZFYVE16Q7Z3T8 1539 aa34.6■■■■□ 3.13
C19orf54-205ENST00000596809 LOC105371045A0A1W2PR82 267 aa34.59■■■■□ 3.13
C19orf54-205ENST00000596809 AFAP1Q8N556 730 aa34.56■■■■□ 3.12
C19orf54-205ENST00000596809 ADAMTSL3P82987 1691 aa34.55■■■■□ 3.12
C19orf54-205ENST00000596809 CDC42BPBQ9Y5S2 1711 aa34.52■■■■□ 3.12
C19orf54-205ENST00000596809 ZNF518AQ6AHZ1 1483 aa34.52■■■■□ 3.12
C19orf54-205ENST00000596809 BCORL1Q5H9F3 1711 aa34.52■■■■□ 3.12
C19orf54-205ENST00000596809 PREX2Q70Z35 1606 aa34.5■■■■□ 3.11
C19orf54-205ENST00000596809 PTPRMP28827 1452 aa34.5■■■■□ 3.11
C19orf54-205ENST00000596809 MTUS2Q5JR59 1369 aa34.48■■■■□ 3.11
C19orf54-205ENST00000596809 ATP10AO60312 1499 aa34.46■■■■□ 3.11
C19orf54-205ENST00000596809 MYT1LQ9UL68 1186 aa34.45■■■■□ 3.11
C19orf54-205ENST00000596809 ZNF777Q9ULD5 760 aaPredicted RBP34.44■■■■□ 3.1
C19orf54-205ENST00000596809 GPATCH8Q9UKJ3 1502 aaKnown RBP34.44■■■■□ 3.1
C19orf54-205ENST00000596809 ARHGEF12Q9NZN5 1544 aa34.43■■■■□ 3.1
C19orf54-205ENST00000596809 KDM5CP41229 1560 aa34.42■■■■□ 3.1
C19orf54-205ENST00000596809 MADDQ8WXG6 1647 aa34.41■■■■□ 3.1
C19orf54-205ENST00000596809 TRAPPC8Q9Y2L5 1435 aa34.41■■■■□ 3.1
C19orf54-205ENST00000596809 MLECQ14165 292 aa34.41■■■■□ 3.1
C19orf54-205ENST00000596809 CDC42BPAQ5VT25 1732 aa34.41■■■■□ 3.1
C19orf54-205ENST00000596809 HECW2Q9P2P5 1572 aa34.4■■■■□ 3.1
C19orf54-205ENST00000596809 ABCC1P33527 1531 aa34.4■■■■□ 3.1
C19orf54-205ENST00000596809 C9orf84Q5VXU9 1444 aa34.39■■■■□ 3.1
C19orf54-205ENST00000596809 CCNB3Q8WWL7 1395 aa34.39■■■■□ 3.1
C19orf54-205ENST00000596809 SIGLEC1Q9BZZ2 1709 aa34.39■■■■□ 3.1
C19orf54-205ENST00000596809 CFDP1Q9UEE9 299 aaPredicted RBP34.38■■■■□ 3.09
C19orf54-205ENST00000596809 MLH3Q9UHC1 1453 aa34.36■■■■□ 3.09
C19orf54-205ENST00000596809 HNRNPMP52272 730 aaKnown RBP eCLIP34.31■■■■□ 3.08
C19orf54-205ENST00000596809 ITSN2Q9NZM3 1697 aa34.3■■■■□ 3.08
C19orf54-205ENST00000596809 EHBP1L1Q8N3D4 1523 aa34.3■■■■□ 3.08
C19orf54-205ENST00000596809 SAMD9LQ8IVG5 1584 aa34.29■■■■□ 3.08
C19orf54-205ENST00000596809 RIMS1Q86UR5 1692 aaKnown RBP34.28■■■■□ 3.08
C19orf54-205ENST00000596809 DIP2CQ9Y2E4 1556 aa34.27■■■■□ 3.08
C19orf54-205ENST00000596809 VPS8Q8N3P4 1428 aa34.26■■■■□ 3.07
C19orf54-205ENST00000596809 KIAA1107Q9UPP5 1409 aa34.25■■■■□ 3.07
C19orf54-205ENST00000596809 PLPPR3Q6T4P5 718 aa34.25■■■■□ 3.07
C19orf54-205ENST00000596809 SYCP2Q9BX26 1530 aa34.24■■■■□ 3.07
C19orf54-205ENST00000596809 PLEKHH2Q8IVE3 1493 aa34.23■■■■□ 3.07
C19orf54-205ENST00000596809 ABCA6Q8N139 1617 aa34.21■■■■□ 3.07
C19orf54-205ENST00000596809 SPAG9O60271 1321 aaKnown RBP34.21■■■■□ 3.07
C19orf54-205ENST00000596809 TIAM1Q13009 1591 aa34.19■■■■□ 3.06
C19orf54-205ENST00000596809 REREQ9P2R6 1566 aa34.19■■■■□ 3.06
C19orf54-205ENST00000596809 ZNF644Q9H582 1327 aaPredicted RBP34.19■■■■□ 3.06
C19orf54-205ENST00000596809 KIDINS220Q9ULH0 1771 aa34.16■■■■□ 3.06
C19orf54-205ENST00000596809 NCOA2Q15596 1464 aa34.14■■■■□ 3.06
C19orf54-205ENST00000596809 FER1L4A9Z1Z3 1794 aa34.13■■■■□ 3.05
C19orf54-205ENST00000596809 AGLP35573 1532 aa34.13■■■■□ 3.05
C19orf54-205ENST00000596809 LMTK3Q96Q04 1460 aa34.09■■■■□ 3.05
C19orf54-205ENST00000596809 CEBPAP49715 358 aaPredicted RBP34.09■■■■□ 3.05
C19orf54-205ENST00000596809 LRRC9Q6ZRR7 1453 aa34.07■■■■□ 3.05
C19orf54-205ENST00000596809 SUPT6HQ7KZ85 1726 aaKnown RBP34.07■■■■□ 3.05
C19orf54-205ENST00000596809 MBD5Q9P267 1494 aa34.07■■■■□ 3.04
C19orf54-205ENST00000596809 ATP7AQ04656 1500 aa34.05■■■■□ 3.04
C19orf54-205ENST00000596809 KANK4Q5T7N3 995 aaPredicted RBP34.04■■■■□ 3.04
C19orf54-205ENST00000596809 ESF1Q9H501 851 aaKnown RBP34.03■■■■□ 3.04
C19orf54-205ENST00000596809 MAP3K1Q13233 1512 aa34.02■■■■□ 3.04
C19orf54-205ENST00000596809 INO80Q9ULG1 1556 aaPredicted RBP34■■■■□ 3.03
C19orf54-205ENST00000596809 HSPA2P54652 639 aa33.99■■■■□ 3.03
C19orf54-205ENST00000596809 A2MP01023 1474 aa33.97■■■■□ 3.03
C19orf54-205ENST00000596809 RSPH4AQ5TD94 716 aa33.97■■■■□ 3.03
C19orf54-205ENST00000596809 CAMSAP2Q08AD1 1489 aa33.95■■■■□ 3.03
C19orf54-205ENST00000596809 RTEL1-TNFRSF6BF6WH68 1400 aa33.95■■■■□ 3.02
C19orf54-205ENST00000596809 APLP2Q06481 763 aa33.92■■■■□ 3.02
C19orf54-205ENST00000596809 CNTLNQ9NXG0 1405 aa33.9■■■■□ 3.02
C19orf54-205ENST00000596809 CCDC141Q6ZP82 1450 aa33.89■■■■□ 3.02
C19orf54-205ENST00000596809 PLXNC1O60486 1568 aa33.89■■■■□ 3.02
C19orf54-205ENST00000596809 GGT6Q6P531 493 aa33.87■■■■□ 3.01
C19orf54-205ENST00000596809 TSPY4P0CV99 314 aa33.84■■■■□ 3.01
C19orf54-205ENST00000596809 TSPY10P0CW01 314 aa33.84■■■■□ 3.01
C19orf54-205ENST00000596809 DHX29Q7Z478 1369 aaKnown RBP33.84■■■■□ 3.01
C19orf54-205ENST00000596809 ADGBQ8N7X0 1667 aa33.82■■■■□ 3
C19orf54-205ENST00000596809 C3P01024 1663 aa33.81■■■■□ 3
C19orf54-205ENST00000596809 MYOM3Q5VTT5 1437 aa33.81■■■■□ 3
C19orf54-205ENST00000596809 ZMYM3Q14202 1370 aa33.81■■■■□ 3
C19orf54-205ENST00000596809 PREX1Q8TCU6 1659 aa33.8■■■■□ 3
C19orf54-205ENST00000596809 UHRF1BP1Q6BDS2 1440 aa33.79■■■■□ 3
C19orf54-205ENST00000596809 MIA2Q96PC5 1412 aa33.79■■■■□ 3
C19orf54-205ENST00000596809 ILDR1Q86SU0 546 aaPredicted RBP33.79■■■■□ 3
C19orf54-205ENST00000596809 PPP6R1Q9UPN7 881 aa33.79■■■■□ 3
C19orf54-205ENST00000596809 ARHGEF5Q12774 1597 aa33.79■■■■□ 3
C19orf54-205ENST00000596809 SETD1BQ9UPS6 1966 aaKnown RBP33.74■■■□□ 2.99
C19orf54-205ENST00000596809 KIF3BO15066 747 aa33.73■■■□□ 2.99
C19orf54-205ENST00000596809 MROH2AA6NES4 1674 aa33.71■■■□□ 2.99
C19orf54-205ENST00000596809 NPATQ14207 1427 aa33.7■■■□□ 2.98
C19orf54-205ENST00000596809 CLTCQ00610 1675 aaKnown RBP33.67■■■□□ 2.98
C19orf54-205ENST00000596809 MAST1Q9Y2H9 1570 aa33.61■■■□□ 2.97
C19orf54-205ENST00000596809 PTPRKQ15262 1439 aa33.61■■■□□ 2.97
C19orf54-205ENST00000596809 DMRT2Q9Y5R5 561 aa33.6■■■□□ 2.97
C19orf54-205ENST00000596809 WASHC2CQ9Y4E1 1318 aa33.57■■■□□ 2.97
C19orf54-205ENST00000596809 FGD6Q6ZV73 1430 aa33.55■■■□□ 2.96
C19orf54-205ENST00000596809 PTPN23Q9H3S7 1636 aa33.53■■■□□ 2.96
C19orf54-205ENST00000596809 ABCC5O15440 1437 aa33.53■■■□□ 2.96
C19orf54-205ENST00000596809 STRCQ7RTU9 1775 aa33.52■■■□□ 2.96
C19orf54-205ENST00000596809 FBXO41Q8TF61 875 aa33.51■■■□□ 2.95
C19orf54-205ENST00000596809 KDM5DQ9BY66 1539 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms