RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 CDC42BPBQ9Y5S2 1711 aa21.65■■□□□ 1.06
TMEM38A-202ENST00000595452 FRMPD1Q5SYB0 1578 aa21.65■■□□□ 1.06
TMEM38A-202ENST00000595452 CDC42BPAQ5VT25 1732 aa21.64■■□□□ 1.06
TMEM38A-202ENST00000595452 RAPGEF3O95398 923 aa21.63■■□□□ 1.05
TMEM38A-202ENST00000595452 ZMYM4Q5VZL5 1548 aa21.61■■□□□ 1.05
TMEM38A-202ENST00000595452 ITSN2Q9NZM3 1697 aa21.61■■□□□ 1.05
TMEM38A-202ENST00000595452 SCAPERQ9BY12 1400 aa21.61■■□□□ 1.05
TMEM38A-202ENST00000595452 TIAM1Q13009 1591 aa21.61■■□□□ 1.05
TMEM38A-202ENST00000595452 POGZQ7Z3K3 1410 aa21.6■■□□□ 1.05
TMEM38A-202ENST00000595452 ARHGEF40Q8TER5 1519 aa21.6■■□□□ 1.05
TMEM38A-202ENST00000595452 SUPT6HQ7KZ85 1726 aaKnown RBP21.59■■□□□ 1.05
TMEM38A-202ENST00000595452 ZNF518AQ6AHZ1 1483 aa21.58■■□□□ 1.05
TMEM38A-202ENST00000595452 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.05
TMEM38A-202ENST00000595452 CCNB3Q8WWL7 1395 aa21.58■■□□□ 1.04
TMEM38A-202ENST00000595452 ZFYVE16Q7Z3T8 1539 aa21.55■■□□□ 1.04
TMEM38A-202ENST00000595452 ABCC1P33527 1531 aa21.55■■□□□ 1.04
TMEM38A-202ENST00000595452 MAP3K1Q13233 1512 aa21.55■■□□□ 1.04
TMEM38A-202ENST00000595452 APLP2Q06481 763 aa21.53■■□□□ 1.04
TMEM38A-202ENST00000595452 GPATCH8Q9UKJ3 1502 aaKnown RBP21.53■■□□□ 1.04
TMEM38A-202ENST00000595452 PLEKHH2Q8IVE3 1493 aa21.52■■□□□ 1.04
TMEM38A-202ENST00000595452 KDM5CP41229 1560 aa21.5■■□□□ 1.03
TMEM38A-202ENST00000595452 HECW2Q9P2P5 1572 aa21.5■■□□□ 1.03
TMEM38A-202ENST00000595452 CFDP1Q9UEE9 299 aaPredicted RBP21.5■■□□□ 1.03
TMEM38A-202ENST00000595452 LRRC9Q6ZRR7 1453 aa21.48■■□□□ 1.03
TMEM38A-202ENST00000595452 KDM4FA0A1W2PPD8 638 aa21.48■■□□□ 1.03
TMEM38A-202ENST00000595452 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
TMEM38A-202ENST00000595452 ZNF777Q9ULD5 760 aaPredicted RBP21.48■■□□□ 1.03
TMEM38A-202ENST00000595452 SAMD9LQ8IVG5 1584 aa21.48■■□□□ 1.03
TMEM38A-202ENST00000595452 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
TMEM38A-202ENST00000595452 NCOA2Q15596 1464 aa21.46■■□□□ 1.03
TMEM38A-202ENST00000595452 SYCP2Q9BX26 1530 aa21.45■■□□□ 1.02
TMEM38A-202ENST00000595452 BCORL1Q5H9F3 1711 aa21.43■■□□□ 1.02
TMEM38A-202ENST00000595452 MLH3Q9UHC1 1453 aa21.42■■□□□ 1.02
TMEM38A-202ENST00000595452 YEATS2Q9ULM3 1422 aa21.42■■□□□ 1.02
TMEM38A-202ENST00000595452 KIAA1107Q9UPP5 1409 aa21.42■■□□□ 1.02
TMEM38A-202ENST00000595452 ATP10AO60312 1499 aa21.41■■□□□ 1.02
TMEM38A-202ENST00000595452 C9orf84Q5VXU9 1444 aa21.41■■□□□ 1.02
TMEM38A-202ENST00000595452 AFAP1Q8N556 730 aa21.4■■□□□ 1.02
TMEM38A-202ENST00000595452 TRAPPC8Q9Y2L5 1435 aa21.39■■□□□ 1.02
TMEM38A-202ENST00000595452 ARHGEF12Q9NZN5 1544 aa21.39■■□□□ 1.01
TMEM38A-202ENST00000595452 ADAMTSL3P82987 1691 aa21.37■■□□□ 1.01
TMEM38A-202ENST00000595452 DIP2CQ9Y2E4 1556 aa21.37■■□□□ 1.01
TMEM38A-202ENST00000595452 ABCA6Q8N139 1617 aa21.37■■□□□ 1.01
TMEM38A-202ENST00000595452 REREQ9P2R6 1566 aa21.36■■□□□ 1.01
TMEM38A-202ENST00000595452 KIDINS220Q9ULH0 1771 aa21.35■■□□□ 1.01
TMEM38A-202ENST00000595452 SPAG9O60271 1321 aaKnown RBP21.34■■□□□ 1.01
TMEM38A-202ENST00000595452 CAMSAP2Q08AD1 1489 aa21.34■■□□□ 1.01
TMEM38A-202ENST00000595452 HNRNPMP52272 730 aaKnown RBP eCLIP21.33■■□□□ 1.01
TMEM38A-202ENST00000595452 ATP7AQ04656 1500 aa21.33■■□□□ 1
TMEM38A-202ENST00000595452 MADDQ8WXG6 1647 aa21.33■■□□□ 1
TMEM38A-202ENST00000595452 INO80Q9ULG1 1556 aaPredicted RBP21.31■■□□□ 1
TMEM38A-202ENST00000595452 FER1L4A9Z1Z3 1794 aa21.31■■□□□ 1
TMEM38A-202ENST00000595452 MYOM3Q5VTT5 1437 aa21.3■■□□□ 1
TMEM38A-202ENST00000595452 KANK4Q5T7N3 995 aaPredicted RBP21.3■■□□□ 1
TMEM38A-202ENST00000595452 CCDC141Q6ZP82 1450 aa21.3■■□□□ 1
TMEM38A-202ENST00000595452 RIMS1Q86UR5 1692 aaKnown RBP21.3■■□□□ 1
TMEM38A-202ENST00000595452 MIA2Q96PC5 1412 aa21.29■■□□□ 1
TMEM38A-202ENST00000595452 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
TMEM38A-202ENST00000595452 SIGLEC1Q9BZZ2 1709 aa21.29■■□□□ 1
TMEM38A-202ENST00000595452 ADGBQ8N7X0 1667 aa21.28■■□□□ 1
TMEM38A-202ENST00000595452 AGLP35573 1532 aa21.27■■□□□ 1
TMEM38A-202ENST00000595452 ARHGEF5Q12774 1597 aa21.27■□□□□ 0.99
TMEM38A-202ENST00000595452 ZNF644Q9H582 1327 aaPredicted RBP21.26■□□□□ 0.99
TMEM38A-202ENST00000595452 PTPRMP28827 1452 aa21.26■□□□□ 0.99
TMEM38A-202ENST00000595452 MBD5Q9P267 1494 aa21.26■□□□□ 0.99
TMEM38A-202ENST00000595452 RTEL1-TNFRSF6BF6WH68 1400 aa21.24■□□□□ 0.99
TMEM38A-202ENST00000595452 MLECQ14165 292 aa21.24■□□□□ 0.99
TMEM38A-202ENST00000595452 TSPY4P0CV99 314 aa21.21■□□□□ 0.99
TMEM38A-202ENST00000595452 TSPY10P0CW01 314 aa21.21■□□□□ 0.99
TMEM38A-202ENST00000595452 ESF1Q9H501 851 aaKnown RBP21.21■□□□□ 0.99
TMEM38A-202ENST00000595452 A2MP01023 1474 aa21.2■□□□□ 0.98
TMEM38A-202ENST00000595452 PTPN23Q9H3S7 1636 aa21.19■□□□□ 0.98
TMEM38A-202ENST00000595452 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
TMEM38A-202ENST00000595452 MAST1Q9Y2H9 1570 aa21.16■□□□□ 0.98
TMEM38A-202ENST00000595452 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
TMEM38A-202ENST00000595452 CNTLNQ9NXG0 1405 aa21.14■□□□□ 0.98
TMEM38A-202ENST00000595452 CROCC2H7BZ55 1655 aa21.14■□□□□ 0.97
TMEM38A-202ENST00000595452 TCOF1Q13428 1488 aaKnown RBP21.11■□□□□ 0.97
TMEM38A-202ENST00000595452 MROH2AA6NES4 1674 aa21.1■□□□□ 0.97
TMEM38A-202ENST00000595452 SHANK2Q9UPX8 1470 aa21.1■□□□□ 0.97
TMEM38A-202ENST00000595452 DNMT1P26358 1616 aaKnown RBP21.09■□□□□ 0.97
TMEM38A-202ENST00000595452 DHX29Q7Z478 1369 aaKnown RBP21.09■□□□□ 0.97
TMEM38A-202ENST00000595452 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.97
TMEM38A-202ENST00000595452 C3P01024 1663 aa21.06■□□□□ 0.96
TMEM38A-202ENST00000595452 PREX1Q8TCU6 1659 aa21.05■□□□□ 0.96
TMEM38A-202ENST00000595452 FAM135AQ9P2D6 1515 aa21.05■□□□□ 0.96
TMEM38A-202ENST00000595452 EIF2AK4Q9P2K8 1649 aaKnown RBP21.04■□□□□ 0.96
TMEM38A-202ENST00000595452 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
TMEM38A-202ENST00000595452 CLTCQ00610 1675 aaKnown RBP21.04■□□□□ 0.96
TMEM38A-202ENST00000595452 DAPK1P53355 1430 aa21.04■□□□□ 0.96
TMEM38A-202ENST00000595452 GGT6Q6P531 493 aa21.03■□□□□ 0.96
TMEM38A-202ENST00000595452 SETD1BQ9UPS6 1966 aaKnown RBP21.03■□□□□ 0.96
TMEM38A-202ENST00000595452 DUOX2Q9NRD8 1548 aa21.02■□□□□ 0.96
TMEM38A-202ENST00000595452 ABCC5O15440 1437 aa21.01■□□□□ 0.95
TMEM38A-202ENST00000595452 KIF3BO15066 747 aa21■□□□□ 0.95
TMEM38A-202ENST00000595452 FAM50AQ14320 339 aaKnown RBP21■□□□□ 0.95
TMEM38A-202ENST00000595452 LMTK3Q96Q04 1460 aa20.99■□□□□ 0.95
TMEM38A-202ENST00000595452 KDM5DQ9BY66 1539 aa20.99■□□□□ 0.95
TMEM38A-202ENST00000595452 ANKRD30AQ9BXX3 1397 aa20.97■□□□□ 0.95
TMEM38A-202ENST00000595452 KIF15Q9NS87 1388 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms