RNA–Protein interactions for RNA: ENST00000594617.7

PDE4C-207, Transcript of phosphodiesterase 4C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE4C, Length 4,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-207ENST00000594617 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
PDE4C-207ENST00000594617 ARID4BQ4LE39 1312 aaPredicted RBP20.01■□□□□ 0.79
PDE4C-207ENST00000594617 TNNT2P45379 298 aaPredicted RBP20■□□□□ 0.79
PDE4C-207ENST00000594617 PRKRIP1Q9H875 184 aaPredicted RBP20■□□□□ 0.79
PDE4C-207ENST00000594617 ANKRD30AQ9BXX3 1397 aa19.98■□□□□ 0.79
PDE4C-207ENST00000594617 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
PDE4C-207ENST00000594617 DNTTIP2Q5QJE6 756 aaKnown RBP19.96■□□□□ 0.79
PDE4C-207ENST00000594617 NUP155O75694 1391 aa19.96■□□□□ 0.79
PDE4C-207ENST00000594617 CFAP44Q96MT7 982 aa19.95■□□□□ 0.78
PDE4C-207ENST00000594617 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
PDE4C-207ENST00000594617 PHLDB1Q86UU1 1377 aa19.94■□□□□ 0.78
PDE4C-207ENST00000594617 U2SURPO15042 1029 aaKnown RBP19.93■□□□□ 0.78
PDE4C-207ENST00000594617 MORC1Q86VD1 984 aa19.93■□□□□ 0.78
PDE4C-207ENST00000594617 KIF15Q9NS87 1388 aa19.92■□□□□ 0.78
PDE4C-207ENST00000594617 RWDD1Q9H446 243 aaPredicted RBP19.91■□□□□ 0.78
PDE4C-207ENST00000594617 KANK1Q14678 1352 aa19.91■□□□□ 0.78
PDE4C-207ENST00000594617 GOLGA2Q08379 1002 aa19.91■□□□□ 0.78
PDE4C-207ENST00000594617 PTMSP20962 102 aa19.9■□□□□ 0.78
PDE4C-207ENST00000594617 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.78
PDE4C-207ENST00000594617 MYBBP1AQ9BQG0 1328 aaKnown RBP19.89■□□□□ 0.78
PDE4C-207ENST00000594617 POGKQ9P215 609 aa19.88■□□□□ 0.77
PDE4C-207ENST00000594617 CCDC18Q5T9S5 1454 aa19.88■□□□□ 0.77
PDE4C-207ENST00000594617 PMFBP1Q8TBY8 1022 aa19.88■□□□□ 0.77
PDE4C-207ENST00000594617 IPO8O15397 1037 aaKnown RBP19.87■□□□□ 0.77
PDE4C-207ENST00000594617 GBP4Q96PP9 640 aa19.87■□□□□ 0.77
PDE4C-207ENST00000594617 TDRD9Q8NDG6 1382 aaKnown RBP19.86■□□□□ 0.77
PDE4C-207ENST00000594617 MSNP26038 577 aaKnown RBP19.86■□□□□ 0.77
PDE4C-207ENST00000594617 PDE4AP27815 886 aa19.86■□□□□ 0.77
PDE4C-207ENST00000594617 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
PDE4C-207ENST00000594617 HAP1P54257 671 aaPredicted RBP19.85■□□□□ 0.77
PDE4C-207ENST00000594617 SLKQ9H2G2 1235 aaPredicted RBP19.85■□□□□ 0.77
PDE4C-207ENST00000594617 CARMIL2Q6F5E8 1435 aa19.85■□□□□ 0.77
PDE4C-207ENST00000594617 KIF21BO75037 1637 aa19.83■□□□□ 0.76
PDE4C-207ENST00000594617 ZRSR1Q15695 479 aaKnown RBP19.82■□□□□ 0.76
PDE4C-207ENST00000594617 RRP1P56182 461 aaKnown RBP19.82■□□□□ 0.76
PDE4C-207ENST00000594617 SENP3Q9H4L4 574 aaPredicted RBP19.82■□□□□ 0.76
PDE4C-207ENST00000594617 SPRYD3Q8NCJ5 442 aa19.82■□□□□ 0.76
PDE4C-207ENST00000594617 CENPQQ7L2Z9 268 aaPredicted RBP19.81■□□□□ 0.76
PDE4C-207ENST00000594617 RSPH4AQ5TD94 716 aa19.79■□□□□ 0.76
PDE4C-207ENST00000594617 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
PDE4C-207ENST00000594617 GOLGA6L3A6NEY3 463 aa19.78■□□□□ 0.76
PDE4C-207ENST00000594617 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
PDE4C-207ENST00000594617 EIF3AQ14152 1382 aaKnown RBP19.78■□□□□ 0.76
PDE4C-207ENST00000594617 FAM161AQ3B820 660 aa19.78■□□□□ 0.76
PDE4C-207ENST00000594617 MCCP23508 829 aa19.77■□□□□ 0.75
PDE4C-207ENST00000594617 EXOC6Q8TAG9 804 aa19.76■□□□□ 0.75
PDE4C-207ENST00000594617 UACAQ9BZF9 1416 aa19.76■□□□□ 0.75
PDE4C-207ENST00000594617 PLCB2Q00722 1185 aa19.76■□□□□ 0.75
PDE4C-207ENST00000594617 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
PDE4C-207ENST00000594617 USP47Q96K76 1375 aa19.75■□□□□ 0.75
PDE4C-207ENST00000594617 U2AF1L5P0DN76 240 aaPredicted RBP19.75■□□□□ 0.75
PDE4C-207ENST00000594617 U2AF1Q01081 240 aaKnown RBP eCLIP19.75■□□□□ 0.75
PDE4C-207ENST00000594617 GSE1Q14687 1217 aa19.74■□□□□ 0.75
PDE4C-207ENST00000594617 CALD1Q05682 793 aaKnown RBP19.74■□□□□ 0.75
PDE4C-207ENST00000594617 SRPK2P78362 688 aaKnown RBP19.74■□□□□ 0.75
PDE4C-207ENST00000594617 RRBP1Q9P2E9 1410 aaKnown RBP19.74■□□□□ 0.75
PDE4C-207ENST00000594617 GZF1Q9H116 711 aaPredicted RBP19.73■□□□□ 0.75
PDE4C-207ENST00000594617 CCDC7Q96M83 1385 aa19.73■□□□□ 0.75
PDE4C-207ENST00000594617 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
PDE4C-207ENST00000594617 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
PDE4C-207ENST00000594617 ITPRIPQ8IWB1 547 aa19.72■□□□□ 0.75
PDE4C-207ENST00000594617 FGD6Q6ZV73 1430 aa19.71■□□□□ 0.75
PDE4C-207ENST00000594617 C14orf37Q86TY3 774 aa19.71■□□□□ 0.75
PDE4C-207ENST00000594617 CNTLNQ9NXG0 1405 aa19.71■□□□□ 0.75
PDE4C-207ENST00000594617 IGF1RP08069 1367 aa19.71■□□□□ 0.75
PDE4C-207ENST00000594617 TPRNQ4KMQ1 711 aa19.7■□□□□ 0.74
PDE4C-207ENST00000594617 ERCC6Q03468 1493 aa19.7■□□□□ 0.74
PDE4C-207ENST00000594617 EFCAB2Q5VUJ9 269 aa19.7■□□□□ 0.74
PDE4C-207ENST00000594617 LRRC9Q6ZRR7 1453 aa19.69■□□□□ 0.74
PDE4C-207ENST00000594617 MFAP1P55081 439 aaKnown RBP19.69■□□□□ 0.74
PDE4C-207ENST00000594617 GOLGA6L6A8MZA4 724 aa19.68■□□□□ 0.74
PDE4C-207ENST00000594617 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.68■□□□□ 0.74
PDE4C-207ENST00000594617 NRDCO43847 1150 aa19.68■□□□□ 0.74
PDE4C-207ENST00000594617 PANK3Q9H999 370 aa19.67■□□□□ 0.74
PDE4C-207ENST00000594617 CGNL1Q0VF96 1302 aa19.67■□□□□ 0.74
PDE4C-207ENST00000594617 CRBNQ96SW2 442 aa19.67■□□□□ 0.74
PDE4C-207ENST00000594617 SMC4Q9NTJ3 1288 aa19.67■□□□□ 0.74
PDE4C-207ENST00000594617 GOLGA6L4A6NEF3 574 aa19.66■□□□□ 0.74
PDE4C-207ENST00000594617 HDGFL2Q7Z4V5 671 aaPredicted RBP19.66■□□□□ 0.74
PDE4C-207ENST00000594617 KCNJ4P48050 445 aa19.66■□□□□ 0.74
PDE4C-207ENST00000594617 KIF7Q2M1P5 1343 aa19.65■□□□□ 0.74
PDE4C-207ENST00000594617 OS9Q13438 667 aaPredicted RBP19.65■□□□□ 0.74
PDE4C-207ENST00000594617 CCDC146Q8IYE0 955 aa19.65■□□□□ 0.74
PDE4C-207ENST00000594617 NGEFQ8N5V2 710 aa19.65■□□□□ 0.74
PDE4C-207ENST00000594617 RSPH6AQ9H0K4 717 aa19.65■□□□□ 0.74
PDE4C-207ENST00000594617 CCDC144AA2RUR9 1427 aa19.65■□□□□ 0.74
PDE4C-207ENST00000594617 E9PSI1 815 aa19.64■□□□□ 0.74
PDE4C-207ENST00000594617 MYOM3Q5VTT5 1437 aa19.64■□□□□ 0.74
PDE4C-207ENST00000594617 ZBTB7CA1YPR0 619 aa19.64■□□□□ 0.73
PDE4C-207ENST00000594617 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.73
PDE4C-207ENST00000594617 PLIN1O60240 522 aa19.64■□□□□ 0.73
PDE4C-207ENST00000594617 HNRNPMP52272 730 aaKnown RBP eCLIP19.63■□□□□ 0.73
PDE4C-207ENST00000594617 CLUAP1Q96AJ1 413 aa19.63■□□□□ 0.73
PDE4C-207ENST00000594617 DDX11L8A8MPP1 907 aa19.62■□□□□ 0.73
PDE4C-207ENST00000594617 WASHC2AQ641Q2 1341 aa19.62■□□□□ 0.73
PDE4C-207ENST00000594617 SYAP1Q96A49 352 aaPredicted RBP19.62■□□□□ 0.73
PDE4C-207ENST00000594617 CUX1P39880 1505 aa19.61■□□□□ 0.73
PDE4C-207ENST00000594617 KIAA2012Q0VF49 1180 aa19.61■□□□□ 0.73
PDE4C-207ENST00000594617 FGD1P98174 961 aa19.61■□□□□ 0.73
PDE4C-207ENST00000594617 SLC4A3P48751 1232 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms