RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 ZFYVE16Q7Z3T8 1539 aa26.24■■□□□ 1.79
GTF2F1-203ENST00000594213 TROQ12816 1431 aaPredicted RBP26.22■■□□□ 1.79
GTF2F1-203ENST00000594213 LMTK3Q96Q04 1460 aa26.2■■□□□ 1.78
GTF2F1-203ENST00000594213 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
GTF2F1-203ENST00000594213 SIGLEC1Q9BZZ2 1709 aa26.17■■□□□ 1.78
GTF2F1-203ENST00000594213 ATP10AO60312 1499 aa26.15■■□□□ 1.78
GTF2F1-203ENST00000594213 KIF14Q15058 1648 aa26.14■■□□□ 1.78
GTF2F1-203ENST00000594213 MLECQ14165 292 aa26.13■■□□□ 1.77
GTF2F1-203ENST00000594213 RIMS1Q86UR5 1692 aaKnown RBP26.12■■□□□ 1.77
GTF2F1-203ENST00000594213 AFAP1Q8N556 730 aa26.12■■□□□ 1.77
GTF2F1-203ENST00000594213 CLIP1P30622 1438 aa26.12■■□□□ 1.77
GTF2F1-203ENST00000594213 CASKIN1Q8WXD9 1431 aa26.1■■□□□ 1.77
GTF2F1-203ENST00000594213 C9orf84Q5VXU9 1444 aa26.09■■□□□ 1.77
GTF2F1-203ENST00000594213 FBXO41Q8TF61 875 aa26.09■■□□□ 1.77
GTF2F1-203ENST00000594213 ZNF518AQ6AHZ1 1483 aa26.08■■□□□ 1.77
GTF2F1-203ENST00000594213 MYO5CQ9NQX4 1742 aa26.08■■□□□ 1.76
GTF2F1-203ENST00000594213 HSPA2P54652 639 aa26.07■■□□□ 1.76
GTF2F1-203ENST00000594213 ARHGAP5Q13017 1502 aa26.06■■□□□ 1.76
GTF2F1-203ENST00000594213 ARHGEF12Q9NZN5 1544 aa26.06■■□□□ 1.76
GTF2F1-203ENST00000594213 PLPPR3Q6T4P5 718 aa26.05■■□□□ 1.76
GTF2F1-203ENST00000594213 LRRIQ1Q96JM4 1722 aa26.04■■□□□ 1.76
GTF2F1-203ENST00000594213 KDM5CP41229 1560 aa26.03■■□□□ 1.76
GTF2F1-203ENST00000594213 CCDC18Q5T9S5 1454 aa26.02■■□□□ 1.76
GTF2F1-203ENST00000594213 MLH3Q9UHC1 1453 aa25.98■■□□□ 1.75
GTF2F1-203ENST00000594213 TRAPPC8Q9Y2L5 1435 aa25.98■■□□□ 1.75
GTF2F1-203ENST00000594213 CEBPAP49715 358 aaPredicted RBP25.97■■□□□ 1.75
GTF2F1-203ENST00000594213 CDC42BPBQ9Y5S2 1711 aa25.94■■□□□ 1.74
GTF2F1-203ENST00000594213 FYCO1Q9BQS8 1478 aa25.94■■□□□ 1.74
GTF2F1-203ENST00000594213 FER1L4A9Z1Z3 1794 aa25.94■■□□□ 1.74
GTF2F1-203ENST00000594213 DIP2CQ9Y2E4 1556 aa25.93■■□□□ 1.74
GTF2F1-203ENST00000594213 REREQ9P2R6 1566 aa25.92■■□□□ 1.74
GTF2F1-203ENST00000594213 MYT1LQ9UL68 1186 aa25.92■■□□□ 1.74
GTF2F1-203ENST00000594213 ABCC1P33527 1531 aa25.92■■□□□ 1.74
GTF2F1-203ENST00000594213 PREX2Q70Z35 1606 aa25.91■■□□□ 1.74
GTF2F1-203ENST00000594213 AGLP35573 1532 aa25.88■■□□□ 1.73
GTF2F1-203ENST00000594213 ABCA6Q8N139 1617 aa25.86■■□□□ 1.73
GTF2F1-203ENST00000594213 GPATCH8Q9UKJ3 1502 aaKnown RBP25.85■■□□□ 1.73
GTF2F1-203ENST00000594213 ZNF777Q9ULD5 760 aaPredicted RBP25.81■■□□□ 1.72
GTF2F1-203ENST00000594213 ITSN2Q9NZM3 1697 aa25.8■■□□□ 1.72
GTF2F1-203ENST00000594213 CDC42BPAQ5VT25 1732 aa25.8■■□□□ 1.72
GTF2F1-203ENST00000594213 CERKQ8TCT0 537 aa25.8■■□□□ 1.72
GTF2F1-203ENST00000594213 HNRNPMP52272 730 aaKnown RBP eCLIP25.79■■□□□ 1.72
GTF2F1-203ENST00000594213 KIDINS220Q9ULH0 1771 aa25.79■■□□□ 1.72
GTF2F1-203ENST00000594213 UHRF1BP1Q6BDS2 1440 aa25.78■■□□□ 1.72
GTF2F1-203ENST00000594213 KIAA1107Q9UPP5 1409 aa25.78■■□□□ 1.72
GTF2F1-203ENST00000594213 SAMD9LQ8IVG5 1584 aa25.78■■□□□ 1.72
GTF2F1-203ENST00000594213 PREX1Q8TCU6 1659 aa25.77■■□□□ 1.72
GTF2F1-203ENST00000594213 CFDP1Q9UEE9 299 aaPredicted RBP25.76■■□□□ 1.71
GTF2F1-203ENST00000594213 SPAG9O60271 1321 aaKnown RBP25.76■■□□□ 1.71
GTF2F1-203ENST00000594213 SETD1BQ9UPS6 1966 aaKnown RBP25.75■■□□□ 1.71
GTF2F1-203ENST00000594213 SYCP2Q9BX26 1530 aa25.73■■□□□ 1.71
GTF2F1-203ENST00000594213 ESF1Q9H501 851 aaKnown RBP25.73■■□□□ 1.71
GTF2F1-203ENST00000594213 DMRT2Q9Y5R5 561 aa25.73■■□□□ 1.71
GTF2F1-203ENST00000594213 CNTLNQ9NXG0 1405 aa25.72■■□□□ 1.71
GTF2F1-203ENST00000594213 CCNB3Q8WWL7 1395 aa25.72■■□□□ 1.71
GTF2F1-203ENST00000594213 MTUS2Q5JR59 1369 aa25.7■■□□□ 1.71
GTF2F1-203ENST00000594213 PLEKHH2Q8IVE3 1493 aa25.7■■□□□ 1.7
GTF2F1-203ENST00000594213 C3P01024 1663 aa25.68■■□□□ 1.7
GTF2F1-203ENST00000594213 STRCQ7RTU9 1775 aa25.67■■□□□ 1.7
GTF2F1-203ENST00000594213 ZNF644Q9H582 1327 aaPredicted RBP25.65■■□□□ 1.7
GTF2F1-203ENST00000594213 ZMYM3Q14202 1370 aa25.65■■□□□ 1.7
GTF2F1-203ENST00000594213 PTPRTO14522 1441 aa25.64■■□□□ 1.7
GTF2F1-203ENST00000594213 NPATQ14207 1427 aa25.63■■□□□ 1.69
GTF2F1-203ENST00000594213 ATP7AQ04656 1500 aa25.63■■□□□ 1.69
GTF2F1-203ENST00000594213 A2MP01023 1474 aa25.62■■□□□ 1.69
GTF2F1-203ENST00000594213 MBD5Q9P267 1494 aa25.61■■□□□ 1.69
GTF2F1-203ENST00000594213 CEP162Q5TB80 1403 aa25.61■■□□□ 1.69
GTF2F1-203ENST00000594213 PLXNC1O60486 1568 aa25.61■■□□□ 1.69
GTF2F1-203ENST00000594213 INO80Q9ULG1 1556 aaPredicted RBP25.6■■□□□ 1.69
GTF2F1-203ENST00000594213 NCOA1Q15788 1441 aa25.58■■□□□ 1.69
GTF2F1-203ENST00000594213 TIAM1Q13009 1591 aa25.57■■□□□ 1.68
GTF2F1-203ENST00000594213 PPP6R1Q9UPN7 881 aa25.57■■□□□ 1.68
GTF2F1-203ENST00000594213 EHBP1L1Q8N3D4 1523 aa25.56■■□□□ 1.68
GTF2F1-203ENST00000594213 GGT6Q6P531 493 aa25.55■■□□□ 1.68
GTF2F1-203ENST00000594213 MROH2AA6NES4 1674 aa25.54■■□□□ 1.68
GTF2F1-203ENST00000594213 RTEL1-TNFRSF6BF6WH68 1400 aa25.54■■□□□ 1.68
GTF2F1-203ENST00000594213 SUPT6HQ7KZ85 1726 aaKnown RBP25.52■■□□□ 1.68
GTF2F1-203ENST00000594213 PTPRKQ15262 1439 aa25.52■■□□□ 1.68
GTF2F1-203ENST00000594213 DHX29Q7Z478 1369 aaKnown RBP25.5■■□□□ 1.67
GTF2F1-203ENST00000594213 LTBP4Q8N2S1 1624 aa25.47■■□□□ 1.67
GTF2F1-203ENST00000594213 NCOA2Q15596 1464 aa25.47■■□□□ 1.67
GTF2F1-203ENST00000594213 CAMSAP1Q5T5Y3 1602 aa25.45■■□□□ 1.67
GTF2F1-203ENST00000594213 NCKAP5LQ9HCH0 1330 aa25.45■■□□□ 1.66
GTF2F1-203ENST00000594213 RSPH4AQ5TD94 716 aa25.45■■□□□ 1.66
GTF2F1-203ENST00000594213 CLTCQ00610 1675 aaKnown RBP25.43■■□□□ 1.66
GTF2F1-203ENST00000594213 ADGBQ8N7X0 1667 aa25.42■■□□□ 1.66
GTF2F1-203ENST00000594213 CCDC141Q6ZP82 1450 aa25.41■■□□□ 1.66
GTF2F1-203ENST00000594213 PKD2Q13563 968 aa25.41■■□□□ 1.66
GTF2F1-203ENST00000594213 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
GTF2F1-203ENST00000594213 LOC105371045A0A1W2PR82 267 aa25.39■■□□□ 1.66
GTF2F1-203ENST00000594213 KIF3BO15066 747 aa25.39■■□□□ 1.66
GTF2F1-203ENST00000594213 CAMSAP2Q08AD1 1489 aa25.39■■□□□ 1.65
GTF2F1-203ENST00000594213 TCOF1Q13428 1488 aaKnown RBP25.38■■□□□ 1.65
GTF2F1-203ENST00000594213 IQSEC2Q5JU85 1478 aa25.37■■□□□ 1.65
GTF2F1-203ENST00000594213 CEP170BQ9Y4F5 1589 aaPredicted RBP25.35■■□□□ 1.65
GTF2F1-203ENST00000594213 MYO3AQ8NEV4 1616 aa25.35■■□□□ 1.65
GTF2F1-203ENST00000594213 FBXO31Q5XUX0 539 aaPredicted RBP25.35■■□□□ 1.65
GTF2F1-203ENST00000594213 VPS8Q8N3P4 1428 aa25.35■■□□□ 1.65
GTF2F1-203ENST00000594213 ZNF142P52746 1687 aaPredicted RBP25.35■■□□□ 1.65
GTF2F1-203ENST00000594213 ZNF335Q9H4Z2 1342 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms