RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 TTC37Q6PGP7 1564 aa22.13■■□□□ 1.13
GTF2F1-202ENST00000593678 MYO5CQ9NQX4 1742 aa22.13■■□□□ 1.13
GTF2F1-202ENST00000593678 DNMT1P26358 1616 aaKnown RBP22.12■■□□□ 1.13
GTF2F1-202ENST00000593678 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
GTF2F1-202ENST00000593678 DAPK1P53355 1430 aa22.11■■□□□ 1.13
GTF2F1-202ENST00000593678 PTPRKQ15262 1439 aa22.11■■□□□ 1.13
GTF2F1-202ENST00000593678 ARHGAP5Q13017 1502 aa22.1■■□□□ 1.13
GTF2F1-202ENST00000593678 ASXL2Q76L83 1435 aa22.1■■□□□ 1.13
GTF2F1-202ENST00000593678 HFM1A2PYH4 1435 aa22.09■■□□□ 1.13
GTF2F1-202ENST00000593678 CYB5RLQ6IPT4 315 aa22.09■■□□□ 1.13
GTF2F1-202ENST00000593678 CHIC2Q9UKJ5 165 aa22.09■■□□□ 1.13
GTF2F1-202ENST00000593678 CDC42BPBQ9Y5S2 1711 aa22.08■■□□□ 1.13
GTF2F1-202ENST00000593678 ABCC5O15440 1437 aa22.06■■□□□ 1.12
GTF2F1-202ENST00000593678 AKNAQ7Z591 1439 aa22.06■■□□□ 1.12
GTF2F1-202ENST00000593678 PLCH2O75038 1416 aa22.04■■□□□ 1.12
GTF2F1-202ENST00000593678 ROCK1Q13464 1354 aa22.03■■□□□ 1.12
GTF2F1-202ENST00000593678 PLEKHH2Q8IVE3 1493 aa22.02■■□□□ 1.12
GTF2F1-202ENST00000593678 RRP7BPQ9NSQ0 103 aa22.02■■□□□ 1.12
GTF2F1-202ENST00000593678 NAIPQ13075 1403 aa22.02■■□□□ 1.11
GTF2F1-202ENST00000593678 SAMD9LQ8IVG5 1584 aa22.01■■□□□ 1.11
GTF2F1-202ENST00000593678 RSPH4AQ5TD94 716 aa22.01■■□□□ 1.11
GTF2F1-202ENST00000593678 EFCAB2Q5VUJ9 269 aa22.01■■□□□ 1.11
GTF2F1-202ENST00000593678 DHX57Q6P158 1386 aaKnown RBP22.01■■□□□ 1.11
GTF2F1-202ENST00000593678 CROCC2H7BZ55 1655 aa22■■□□□ 1.11
GTF2F1-202ENST00000593678 GCC2Q8IWJ2 1684 aa22■■□□□ 1.11
GTF2F1-202ENST00000593678 TSPY4P0CV99 314 aa22■■□□□ 1.11
GTF2F1-202ENST00000593678 TSPY10P0CW01 314 aa22■■□□□ 1.11
GTF2F1-202ENST00000593678 CLSPNQ9HAW4 1339 aa22■■□□□ 1.11
GTF2F1-202ENST00000593678 ABCA9Q8IUA7 1624 aa22■■□□□ 1.11
GTF2F1-202ENST00000593678 ARHGEF5Q12774 1597 aa21.99■■□□□ 1.11
GTF2F1-202ENST00000593678 ARAP3Q8WWN8 1544 aa21.99■■□□□ 1.11
GTF2F1-202ENST00000593678 ADGBQ8N7X0 1667 aa21.98■■□□□ 1.11
GTF2F1-202ENST00000593678 SHANK2Q9UPX8 1470 aa21.97■■□□□ 1.11
GTF2F1-202ENST00000593678 HNRNPMP52272 730 aaKnown RBP eCLIP21.97■■□□□ 1.11
GTF2F1-202ENST00000593678 CCDC141Q6ZP82 1450 aa21.97■■□□□ 1.11
GTF2F1-202ENST00000593678 ACIN1Q9UKV3 1341 aaKnown RBP21.96■■□□□ 1.11
GTF2F1-202ENST00000593678 ANKRD30AQ9BXX3 1397 aa21.96■■□□□ 1.11
GTF2F1-202ENST00000593678 SYCP2Q9BX26 1530 aa21.95■■□□□ 1.1
GTF2F1-202ENST00000593678 KIAA1107Q9UPP5 1409 aa21.95■■□□□ 1.1
GTF2F1-202ENST00000593678 MAPKBP1O60336 1514 aa21.94■■□□□ 1.1
GTF2F1-202ENST00000593678 C9orf84Q5VXU9 1444 aa21.94■■□□□ 1.1
GTF2F1-202ENST00000593678 MBD5Q9P267 1494 aa21.93■■□□□ 1.1
GTF2F1-202ENST00000593678 ADGRL2O95490 1459 aa21.93■■□□□ 1.1
GTF2F1-202ENST00000593678 NCOA1Q15788 1441 aa21.9■■□□□ 1.1
GTF2F1-202ENST00000593678 FANCAO15360 1455 aa21.9■■□□□ 1.1
GTF2F1-202ENST00000593678 ABCC1P33527 1531 aa21.88■■□□□ 1.09
GTF2F1-202ENST00000593678 CD109Q6YHK3 1445 aa21.86■■□□□ 1.09
GTF2F1-202ENST00000593678 TRIM52Q96A61 297 aa21.86■■□□□ 1.09
GTF2F1-202ENST00000593678 CFAP74Q9C0B2 1584 aa21.85■■□□□ 1.09
GTF2F1-202ENST00000593678 MAST1Q9Y2H9 1570 aa21.83■■□□□ 1.09
GTF2F1-202ENST00000593678 KIF15Q9NS87 1388 aa21.82■■□□□ 1.08
GTF2F1-202ENST00000593678 ARHGEF12Q9NZN5 1544 aa21.81■■□□□ 1.08
GTF2F1-202ENST00000593678 ADGRL1O94910 1474 aa21.81■■□□□ 1.08
GTF2F1-202ENST00000593678 KDM6BO15054 1643 aa21.81■■□□□ 1.08
GTF2F1-202ENST00000593678 ANKRD50Q9ULJ7 1429 aa21.8■■□□□ 1.08
GTF2F1-202ENST00000593678 GLI2P10070 1586 aa21.77■■□□□ 1.08
GTF2F1-202ENST00000593678 SCAPERQ9BY12 1400 aa21.76■■□□□ 1.07
GTF2F1-202ENST00000593678 TRAPPC8Q9Y2L5 1435 aa21.76■■□□□ 1.07
GTF2F1-202ENST00000593678 PLXNC1O60486 1568 aa21.76■■□□□ 1.07
GTF2F1-202ENST00000593678 SPAG9O60271 1321 aaKnown RBP21.76■■□□□ 1.07
GTF2F1-202ENST00000593678 FAM69CQ0P6D2 419 aa21.73■■□□□ 1.07
GTF2F1-202ENST00000593678 MYT1LQ9UL68 1186 aa21.73■■□□□ 1.07
GTF2F1-202ENST00000593678 MAP3K4Q9Y6R4 1608 aa21.73■■□□□ 1.07
GTF2F1-202ENST00000593678 NEO1Q92859 1461 aa21.72■■□□□ 1.07
GTF2F1-202ENST00000593678 RTEL1-TNFRSF6BF6WH68 1400 aa21.72■■□□□ 1.07
GTF2F1-202ENST00000593678 AFAP1Q8N556 730 aa21.72■■□□□ 1.07
GTF2F1-202ENST00000593678 MPHOSPH9Q99550 1183 aa21.71■■□□□ 1.07
GTF2F1-202ENST00000593678 DIP2BQ9P265 1576 aa21.71■■□□□ 1.07
GTF2F1-202ENST00000593678 ZNF518AQ6AHZ1 1483 aa21.7■■□□□ 1.06
GTF2F1-202ENST00000593678 DUOX2Q9NRD8 1548 aa21.7■■□□□ 1.06
GTF2F1-202ENST00000593678 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
GTF2F1-202ENST00000593678 ZFYVE16Q7Z3T8 1539 aa21.68■■□□□ 1.06
GTF2F1-202ENST00000593678 ATP7AQ04656 1500 aa21.66■■□□□ 1.06
GTF2F1-202ENST00000593678 NEUROD1Q13562 356 aa21.66■■□□□ 1.06
GTF2F1-202ENST00000593678 ERBINQ96RT1 1412 aa21.65■■□□□ 1.06
GTF2F1-202ENST00000593678 NUP155O75694 1391 aa21.64■■□□□ 1.06
GTF2F1-202ENST00000593678 INO80Q9ULG1 1556 aaPredicted RBP21.64■■□□□ 1.06
GTF2F1-202ENST00000593678 POGZQ7Z3K3 1410 aa21.64■■□□□ 1.05
GTF2F1-202ENST00000593678 TEX14Q8IWB6 1497 aa21.62■■□□□ 1.05
GTF2F1-202ENST00000593678 TIMELESSQ9UNS1 1208 aa21.62■■□□□ 1.05
GTF2F1-202ENST00000593678 DENND4BO75064 1496 aaPredicted RBP21.61■■□□□ 1.05
GTF2F1-202ENST00000593678 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
GTF2F1-202ENST00000593678 KDM5DQ9BY66 1539 aa21.6■■□□□ 1.05
GTF2F1-202ENST00000593678 PZPP20742 1482 aa21.6■■□□□ 1.05
GTF2F1-202ENST00000593678 KDM5CP41229 1560 aa21.58■■□□□ 1.05
GTF2F1-202ENST00000593678 TSPOAP1O95153 1857 aa21.58■■□□□ 1.04
GTF2F1-202ENST00000593678 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
GTF2F1-202ENST00000593678 UNC13BO14795 1591 aa21.56■■□□□ 1.04
GTF2F1-202ENST00000593678 HECW2Q9P2P5 1572 aa21.56■■□□□ 1.04
GTF2F1-202ENST00000593678 MLH3Q9UHC1 1453 aa21.55■■□□□ 1.04
GTF2F1-202ENST00000593678 PKD2Q13563 968 aa21.55■■□□□ 1.04
GTF2F1-202ENST00000593678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.55■■□□□ 1.043e-7■■■■□ 20
GTF2F1-202ENST00000593678 KIDINS220Q9ULH0 1771 aa21.54■■□□□ 1.04
GTF2F1-202ENST00000593678 FOXD1Q16676 465 aa21.54■■□□□ 1.04
GTF2F1-202ENST00000593678 KIF13AQ9H1H9 1805 aa21.53■■□□□ 1.04
GTF2F1-202ENST00000593678 FAM135AQ9P2D6 1515 aa21.52■■□□□ 1.04
GTF2F1-202ENST00000593678 RAPGEF3O95398 923 aa21.52■■□□□ 1.03
GTF2F1-202ENST00000593678 DHX29Q7Z478 1369 aaKnown RBP21.51■■□□□ 1.03
GTF2F1-202ENST00000593678 ANKRD30BQ9BXX2 1392 aa21.51■■□□□ 1.03
GTF2F1-202ENST00000593678 EIF2AK4Q9P2K8 1649 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms