RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 PREX2Q70Z35 1606 aa28.63■■■□□ 2.17
CIRBP-244ENST00000593283 POGZQ7Z3K3 1410 aa28.61■■■□□ 2.17
CIRBP-244ENST00000593283 SCAPERQ9BY12 1400 aa28.6■■■□□ 2.17
CIRBP-244ENST00000593283 ZFYVE16Q7Z3T8 1539 aa28.59■■■□□ 2.17
CIRBP-244ENST00000593283 CDC42BPAQ5VT25 1732 aa28.58■■■□□ 2.17
CIRBP-244ENST00000593283 EFCAB2Q5VUJ9 269 aa28.57■■■□□ 2.16
CIRBP-244ENST00000593283 ADAMTSL3P82987 1691 aa28.56■■■□□ 2.16
CIRBP-244ENST00000593283 BCORL1Q5H9F3 1711 aa28.56■■■□□ 2.16
CIRBP-244ENST00000593283 YEATS2Q9ULM3 1422 aa28.53■■■□□ 2.16
CIRBP-244ENST00000593283 SIGLEC1Q9BZZ2 1709 aa28.52■■■□□ 2.16
CIRBP-244ENST00000593283 MAGI2Q86UL8 1455 aa28.52■■■□□ 2.16
CIRBP-244ENST00000593283 ABCC1P33527 1531 aa28.49■■■□□ 2.15
CIRBP-244ENST00000593283 KDM5CP41229 1560 aa28.49■■■□□ 2.15
CIRBP-244ENST00000593283 ITSN2Q9NZM3 1697 aa28.48■■■□□ 2.15
CIRBP-244ENST00000593283 MADDQ8WXG6 1647 aa28.47■■■□□ 2.15
CIRBP-244ENST00000593283 ZNF518AQ6AHZ1 1483 aa28.47■■■□□ 2.15
CIRBP-244ENST00000593283 ARID4BQ4LE39 1312 aaPredicted RBP28.45■■■□□ 2.15
CIRBP-244ENST00000593283 LOC105371045A0A1W2PR82 267 aa28.45■■■□□ 2.14
CIRBP-244ENST00000593283 HECW2Q9P2P5 1572 aa28.43■■■□□ 2.14
CIRBP-244ENST00000593283 EHBP1L1Q8N3D4 1523 aa28.43■■■□□ 2.14
CIRBP-244ENST00000593283 MTUS2Q5JR59 1369 aa28.42■■■□□ 2.14
CIRBP-244ENST00000593283 ARHGEF12Q9NZN5 1544 aa28.41■■■□□ 2.14
CIRBP-244ENST00000593283 SAMD9LQ8IVG5 1584 aa28.41■■■□□ 2.14
CIRBP-244ENST00000593283 GPATCH8Q9UKJ3 1502 aaKnown RBP28.39■■■□□ 2.14
CIRBP-244ENST00000593283 RIMS1Q86UR5 1692 aaKnown RBP28.39■■■□□ 2.14
CIRBP-244ENST00000593283 PTPRMP28827 1452 aa28.39■■■□□ 2.13
CIRBP-244ENST00000593283 C9orf84Q5VXU9 1444 aa28.37■■■□□ 2.13
CIRBP-244ENST00000593283 TRAPPC8Q9Y2L5 1435 aa28.36■■■□□ 2.13
CIRBP-244ENST00000593283 ATP10AO60312 1499 aa28.36■■■□□ 2.13
CIRBP-244ENST00000593283 TIAM1Q13009 1591 aa28.36■■■□□ 2.13
CIRBP-244ENST00000593283 DIP2CQ9Y2E4 1556 aa28.36■■■□□ 2.13
CIRBP-244ENST00000593283 ABCA6Q8N139 1617 aa28.36■■■□□ 2.13
CIRBP-244ENST00000593283 AFAP1Q8N556 730 aa28.35■■■□□ 2.13
CIRBP-244ENST00000593283 SYCP2Q9BX26 1530 aa28.34■■■□□ 2.13
CIRBP-244ENST00000593283 VPS8Q8N3P4 1428 aa28.34■■■□□ 2.13
CIRBP-244ENST00000593283 FER1L4A9Z1Z3 1794 aa28.33■■■□□ 2.13
CIRBP-244ENST00000593283 CCNB3Q8WWL7 1395 aa28.33■■■□□ 2.13
CIRBP-244ENST00000593283 MLH3Q9UHC1 1453 aa28.3■■■□□ 2.12
CIRBP-244ENST00000593283 KIDINS220Q9ULH0 1771 aa28.29■■■□□ 2.12
CIRBP-244ENST00000593283 ZNF777Q9ULD5 760 aaPredicted RBP28.28■■■□□ 2.12
CIRBP-244ENST00000593283 SUPT6HQ7KZ85 1726 aaKnown RBP28.28■■■□□ 2.12
CIRBP-244ENST00000593283 REREQ9P2R6 1566 aa28.28■■■□□ 2.12
CIRBP-244ENST00000593283 MYT1LQ9UL68 1186 aa28.25■■■□□ 2.11
CIRBP-244ENST00000593283 PLEKHH2Q8IVE3 1493 aa28.24■■■□□ 2.11
CIRBP-244ENST00000593283 CFDP1Q9UEE9 299 aaPredicted RBP28.24■■■□□ 2.11
CIRBP-244ENST00000593283 MLECQ14165 292 aa28.22■■■□□ 2.11
CIRBP-244ENST00000593283 KIAA1107Q9UPP5 1409 aa28.21■■■□□ 2.11
CIRBP-244ENST00000593283 NCOA2Q15596 1464 aa28.21■■■□□ 2.11
CIRBP-244ENST00000593283 INO80Q9ULG1 1556 aaPredicted RBP28.2■■■□□ 2.1
CIRBP-244ENST00000593283 ATP7AQ04656 1500 aa28.17■■■□□ 2.1
CIRBP-244ENST00000593283 HNRNPMP52272 730 aaKnown RBP eCLIP28.16■■■□□ 2.1
CIRBP-244ENST00000593283 AGLP35573 1532 aa28.16■■■□□ 2.1
CIRBP-244ENST00000593283 LRRC9Q6ZRR7 1453 aa28.15■■■□□ 2.1
CIRBP-244ENST00000593283 MAP3K1Q13233 1512 aa28.13■■■□□ 2.09
CIRBP-244ENST00000593283 SPAG9O60271 1321 aaKnown RBP28.12■■■□□ 2.09
CIRBP-244ENST00000593283 ZNF644Q9H582 1327 aaPredicted RBP28.12■■■□□ 2.09
CIRBP-244ENST00000593283 CAMSAP2Q08AD1 1489 aa28.09■■■□□ 2.09
CIRBP-244ENST00000593283 LMTK3Q96Q04 1460 aa28.09■■■□□ 2.09
CIRBP-244ENST00000593283 PLPPR3Q6T4P5 718 aa28.09■■■□□ 2.09
CIRBP-244ENST00000593283 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
CIRBP-244ENST00000593283 PLXNC1O60486 1568 aa28.07■■■□□ 2.08
CIRBP-244ENST00000593283 ADGBQ8N7X0 1667 aa28.05■■■□□ 2.08
CIRBP-244ENST00000593283 CCDC141Q6ZP82 1450 aa28.02■■■□□ 2.08
CIRBP-244ENST00000593283 KANK4Q5T7N3 995 aaPredicted RBP28.01■■■□□ 2.07
CIRBP-244ENST00000593283 A2MP01023 1474 aa28.01■■■□□ 2.07
CIRBP-244ENST00000593283 C3P01024 1663 aa28■■■□□ 2.07
CIRBP-244ENST00000593283 PREX1Q8TCU6 1659 aa27.99■■■□□ 2.07
CIRBP-244ENST00000593283 ARHGEF5Q12774 1597 aa27.98■■■□□ 2.07
CIRBP-244ENST00000593283 RTEL1-TNFRSF6BF6WH68 1400 aa27.95■■■□□ 2.07
CIRBP-244ENST00000593283 CEBPAP49715 358 aaPredicted RBP27.94■■■□□ 2.06
CIRBP-244ENST00000593283 MROH2AA6NES4 1674 aa27.94■■■□□ 2.06
CIRBP-244ENST00000593283 MYOM3Q5VTT5 1437 aa27.93■■■□□ 2.06
CIRBP-244ENST00000593283 CNTLNQ9NXG0 1405 aa27.92■■■□□ 2.06
CIRBP-244ENST00000593283 SETD1BQ9UPS6 1966 aaKnown RBP27.9■■■□□ 2.06
CIRBP-244ENST00000593283 CLTCQ00610 1675 aaKnown RBP27.9■■■□□ 2.06
CIRBP-244ENST00000593283 ESF1Q9H501 851 aaKnown RBP27.89■■■□□ 2.06
CIRBP-244ENST00000593283 MIA2Q96PC5 1412 aa27.87■■■□□ 2.05
CIRBP-244ENST00000593283 HSPA2P54652 639 aa27.87■■■□□ 2.05
CIRBP-244ENST00000593283 APLP2Q06481 763 aa27.87■■■□□ 2.05
CIRBP-244ENST00000593283 MAST1Q9Y2H9 1570 aa27.84■■■□□ 2.05
CIRBP-244ENST00000593283 RSPH4AQ5TD94 716 aa27.83■■■□□ 2.05
CIRBP-244ENST00000593283 DHX29Q7Z478 1369 aaKnown RBP27.82■■■□□ 2.04
CIRBP-244ENST00000593283 UHRF1BP1Q6BDS2 1440 aa27.82■■■□□ 2.04
CIRBP-244ENST00000593283 PTPN23Q9H3S7 1636 aa27.81■■■□□ 2.04
CIRBP-244ENST00000593283 CROCC2H7BZ55 1655 aa27.8■■■□□ 2.04
CIRBP-244ENST00000593283 GGT6Q6P531 493 aa27.77■■■□□ 2.04
CIRBP-244ENST00000593283 ZMYM3Q14202 1370 aa27.75■■■□□ 2.03
CIRBP-244ENST00000593283 TSPY4P0CV99 314 aa27.75■■■□□ 2.03
CIRBP-244ENST00000593283 TSPY10P0CW01 314 aa27.75■■■□□ 2.03
CIRBP-244ENST00000593283 NPATQ14207 1427 aa27.75■■■□□ 2.03
CIRBP-244ENST00000593283 FGD6Q6ZV73 1430 aa27.73■■■□□ 2.03
CIRBP-244ENST00000593283 MYO3AQ8NEV4 1616 aa27.71■■■□□ 2.03
CIRBP-244ENST00000593283 STRCQ7RTU9 1775 aa27.71■■■□□ 2.03
CIRBP-244ENST00000593283 KDM5DQ9BY66 1539 aa27.71■■■□□ 2.03
CIRBP-244ENST00000593283 FAM135AQ9P2D6 1515 aa27.71■■■□□ 2.03
CIRBP-244ENST00000593283 DNMT1P26358 1616 aaKnown RBP27.7■■■□□ 2.03
CIRBP-244ENST00000593283 KIF3BO15066 747 aa27.7■■■□□ 2.02
CIRBP-244ENST00000593283 RNF17Q9BXT8 1623 aaKnown RBP27.7■■■□□ 2.02
CIRBP-244ENST00000593283 TCOF1Q13428 1488 aaKnown RBP27.7■■■□□ 2.02
CIRBP-244ENST00000593283 SHANK2Q9UPX8 1470 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms