RNA–Protein interactions for RNA: ENST00000592860.2

CFD-202, Transcript of complement factor D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CFD, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-202ENST00000592860 CCDC18Q5T9S5 1454 aa37.54■■■■□ 3.6
CFD-202ENST00000592860 YEATS2Q9ULM3 1422 aa37.53■■■■□ 3.6
CFD-202ENST00000592860 EFCAB2Q5VUJ9 269 aa37.53■■■■□ 3.6
CFD-202ENST00000592860 ZFYVE16Q7Z3T8 1539 aa37.51■■■■□ 3.59
CFD-202ENST00000592860 BCORL1Q5H9F3 1711 aa37.5■■■■□ 3.59
CFD-202ENST00000592860 FYCO1Q9BQS8 1478 aa37.5■■■■□ 3.59
CFD-202ENST00000592860 PTPRMP28827 1452 aa37.48■■■■□ 3.59
CFD-202ENST00000592860 ARHGAP5Q13017 1502 aa37.46■■■■□ 3.59
CFD-202ENST00000592860 MAGI2Q86UL8 1455 aa37.46■■■■□ 3.59
CFD-202ENST00000592860 MADDQ8WXG6 1647 aa37.43■■■■□ 3.58
CFD-202ENST00000592860 SIGLEC1Q9BZZ2 1709 aa37.41■■■■□ 3.58
CFD-202ENST00000592860 ZNF518AQ6AHZ1 1483 aa37.33■■■■□ 3.57
CFD-202ENST00000592860 CDC42BPBQ9Y5S2 1711 aa37.33■■■■□ 3.57
CFD-202ENST00000592860 PREX2Q70Z35 1606 aa37.32■■■■□ 3.57
CFD-202ENST00000592860 AFAP1Q8N556 730 aa37.32■■■■□ 3.56
CFD-202ENST00000592860 KDM5CP41229 1560 aa37.29■■■■□ 3.56
CFD-202ENST00000592860 ATP10AO60312 1499 aa37.28■■■■□ 3.56
CFD-202ENST00000592860 RIMS1Q86UR5 1692 aaKnown RBP37.27■■■■□ 3.56
CFD-202ENST00000592860 ARHGEF12Q9NZN5 1544 aa37.26■■■■□ 3.56
CFD-202ENST00000592860 C9orf84Q5VXU9 1444 aa37.26■■■■□ 3.55
CFD-202ENST00000592860 ABCC1P33527 1531 aa37.26■■■■□ 3.55
CFD-202ENST00000592860 MLECQ14165 292 aa37.25■■■■□ 3.55
CFD-202ENST00000592860 CEP162Q5TB80 1403 aa37.25■■■■□ 3.55
CFD-202ENST00000592860 TRAPPC8Q9Y2L5 1435 aa37.22■■■■□ 3.55
CFD-202ENST00000592860 CDC42BPAQ5VT25 1732 aa37.21■■■■□ 3.55
CFD-202ENST00000592860 GPATCH8Q9UKJ3 1502 aaKnown RBP37.17■■■■□ 3.54
CFD-202ENST00000592860 MYT1LQ9UL68 1186 aa37.15■■■■□ 3.54
CFD-202ENST00000592860 DIP2CQ9Y2E4 1556 aa37.15■■■■□ 3.54
CFD-202ENST00000592860 ITSN2Q9NZM3 1697 aa37.15■■■■□ 3.54
CFD-202ENST00000592860 MLH3Q9UHC1 1453 aa37.14■■■■□ 3.54
CFD-202ENST00000592860 PLPPR3Q6T4P5 718 aa37.13■■■■□ 3.53
CFD-202ENST00000592860 ZNF777Q9ULD5 760 aaPredicted RBP37.11■■■■□ 3.53
CFD-202ENST00000592860 MTUS2Q5JR59 1369 aa37.11■■■■□ 3.53
CFD-202ENST00000592860 LMTK3Q96Q04 1460 aa37.11■■■■□ 3.53
CFD-202ENST00000592860 ABCA6Q8N139 1617 aa37.1■■■■□ 3.53
CFD-202ENST00000592860 SAMD9LQ8IVG5 1584 aa37.1■■■■□ 3.53
CFD-202ENST00000592860 FER1L4A9Z1Z3 1794 aa37.08■■■■□ 3.53
CFD-202ENST00000592860 SYCP2Q9BX26 1530 aa37.05■■■■□ 3.52
CFD-202ENST00000592860 CCNB3Q8WWL7 1395 aa37.04■■■■□ 3.52
CFD-202ENST00000592860 REREQ9P2R6 1566 aa37.04■■■■□ 3.52
CFD-202ENST00000592860 LOC105371045A0A1W2PR82 267 aa37.04■■■■□ 3.52
CFD-202ENST00000592860 CFDP1Q9UEE9 299 aaPredicted RBP37.01■■■■□ 3.52
CFD-202ENST00000592860 EHBP1L1Q8N3D4 1523 aa37■■■■□ 3.51
CFD-202ENST00000592860 KIDINS220Q9ULH0 1771 aa36.99■■■■□ 3.51
CFD-202ENST00000592860 HNRNPMP52272 730 aaKnown RBP eCLIP36.99■■■■□ 3.51
CFD-202ENST00000592860 TIAM1Q13009 1591 aa36.95■■■■□ 3.51
CFD-202ENST00000592860 KIAA1107Q9UPP5 1409 aa36.94■■■■□ 3.5
CFD-202ENST00000592860 ILDR1Q86SU0 546 aaPredicted RBP36.94■■■■□ 3.5
CFD-202ENST00000592860 AGLP35573 1532 aa36.94■■■■□ 3.5
CFD-202ENST00000592860 CEBPAP49715 358 aaPredicted RBP36.92■■■■□ 3.5
CFD-202ENST00000592860 HSPA2P54652 639 aa36.92■■■■□ 3.5
CFD-202ENST00000592860 PLEKHH2Q8IVE3 1493 aa36.92■■■■□ 3.5
CFD-202ENST00000592860 SPAG9O60271 1321 aaKnown RBP36.9■■■■□ 3.5
CFD-202ENST00000592860 ZNF644Q9H582 1327 aaPredicted RBP36.88■■■■□ 3.49
CFD-202ENST00000592860 VPS8Q8N3P4 1428 aa36.84■■■■□ 3.49
CFD-202ENST00000592860 ATP7AQ04656 1500 aa36.83■■■■□ 3.49
CFD-202ENST00000592860 INO80Q9ULG1 1556 aaPredicted RBP36.82■■■■□ 3.48
CFD-202ENST00000592860 NCOA2Q15596 1464 aa36.8■■■■□ 3.48
CFD-202ENST00000592860 MBD5Q9P267 1494 aa36.78■■■■□ 3.48
CFD-202ENST00000592860 SUPT6HQ7KZ85 1726 aaKnown RBP36.73■■■■□ 3.47
CFD-202ENST00000592860 PLXNC1O60486 1568 aa36.72■■■■□ 3.47
CFD-202ENST00000592860 A2MP01023 1474 aa36.72■■■■□ 3.47
CFD-202ENST00000592860 PREX1Q8TCU6 1659 aa36.72■■■■□ 3.47
CFD-202ENST00000592860 ESF1Q9H501 851 aaKnown RBP36.72■■■■□ 3.47
CFD-202ENST00000592860 C3P01024 1663 aa36.7■■■■□ 3.47
CFD-202ENST00000592860 LRRC9Q6ZRR7 1453 aa36.68■■■■□ 3.46
CFD-202ENST00000592860 CNTLNQ9NXG0 1405 aa36.68■■■■□ 3.46
CFD-202ENST00000592860 CAMSAP2Q08AD1 1489 aa36.66■■■■□ 3.46
CFD-202ENST00000592860 UHRF1BP1Q6BDS2 1440 aa36.65■■■■□ 3.46
CFD-202ENST00000592860 KANK4Q5T7N3 995 aaPredicted RBP36.61■■■■□ 3.45
CFD-202ENST00000592860 RTEL1-TNFRSF6BF6WH68 1400 aa36.6■■■■□ 3.45
CFD-202ENST00000592860 CCDC141Q6ZP82 1450 aa36.6■■■■□ 3.45
CFD-202ENST00000592860 MAP3K1Q13233 1512 aa36.56■■■■□ 3.44
CFD-202ENST00000592860 ADGBQ8N7X0 1667 aa36.56■■■■□ 3.44
CFD-202ENST00000592860 GGT6Q6P531 493 aa36.55■■■■□ 3.44
CFD-202ENST00000592860 ZMYM3Q14202 1370 aa36.54■■■■□ 3.44
CFD-202ENST00000592860 MROH2AA6NES4 1674 aa36.53■■■■□ 3.44
CFD-202ENST00000592860 SETD1BQ9UPS6 1966 aaKnown RBP36.51■■■■□ 3.44
CFD-202ENST00000592860 DHX29Q7Z478 1369 aaKnown RBP36.51■■■■□ 3.43
CFD-202ENST00000592860 CLTCQ00610 1675 aaKnown RBP36.49■■■■□ 3.43
CFD-202ENST00000592860 FBXO41Q8TF61 875 aa36.49■■■■□ 3.43
CFD-202ENST00000592860 RSPH4AQ5TD94 716 aa36.48■■■■□ 3.43
CFD-202ENST00000592860 NPATQ14207 1427 aa36.48■■■■□ 3.43
CFD-202ENST00000592860 ARHGEF5Q12774 1597 aa36.47■■■■□ 3.43
CFD-202ENST00000592860 STRCQ7RTU9 1775 aa36.45■■■■□ 3.43
CFD-202ENST00000592860 MYOM3Q5VTT5 1437 aa36.41■■■■□ 3.42
CFD-202ENST00000592860 PPP6R1Q9UPN7 881 aa36.4■■■■□ 3.42
CFD-202ENST00000592860 PTPRKQ15262 1439 aa36.4■■■■□ 3.42
CFD-202ENST00000592860 KIF3BO15066 747 aa36.38■■■■□ 3.41
CFD-202ENST00000592860 TSPY4P0CV99 314 aa36.37■■■■□ 3.41
CFD-202ENST00000592860 TSPY10P0CW01 314 aa36.37■■■■□ 3.41
CFD-202ENST00000592860 MIA2Q96PC5 1412 aa36.36■■■■□ 3.41
CFD-202ENST00000592860 DMRT2Q9Y5R5 561 aa36.34■■■■□ 3.41
CFD-202ENST00000592860 NCOA1Q15788 1441 aa36.33■■■■□ 3.41
CFD-202ENST00000592860 CERKQ8TCT0 537 aa36.31■■■■□ 3.4
CFD-202ENST00000592860 MAST1Q9Y2H9 1570 aa36.3■■■■□ 3.4
CFD-202ENST00000592860 MYO3AQ8NEV4 1616 aa36.29■■■■□ 3.4
CFD-202ENST00000592860 PTPRTO14522 1441 aa36.28■■■■□ 3.4
CFD-202ENST00000592860 APLP2Q06481 763 aa36.28■■■■□ 3.4
CFD-202ENST00000592860 CAMSAP1Q5T5Y3 1602 aa36.26■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms