RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 PIAS4Q8N2W9 510 aaPredicted RBP29.5■■■□□ 2.31
TCF3-216ENST00000592395 AKNAQ7Z591 1439 aa29.48■■■□□ 2.31
TCF3-216ENST00000592395 PREX2Q70Z35 1606 aa29.47■■■□□ 2.31
TCF3-216ENST00000592395 CDC42BPAQ5VT25 1732 aa29.45■■■□□ 2.31
TCF3-216ENST00000592395 CDC42BPBQ9Y5S2 1711 aa29.45■■■□□ 2.31
TCF3-216ENST00000592395 ARHGAP5Q13017 1502 aa29.45■■■□□ 2.3
TCF3-216ENST00000592395 MAP3K1Q13233 1512 aa29.45■■■□□ 2.3
TCF3-216ENST00000592395 EFCAB2Q5VUJ9 269 aa29.43■■■□□ 2.3
TCF3-216ENST00000592395 DENND4BO75064 1496 aaPredicted RBP29.4■■■□□ 2.3
TCF3-216ENST00000592395 ADGRL1O94910 1474 aa29.4■■■□□ 2.3
TCF3-216ENST00000592395 FRMPD1Q5SYB0 1578 aa29.39■■■□□ 2.3
TCF3-216ENST00000592395 RICTORQ6R327 1708 aa29.39■■■□□ 2.3
TCF3-216ENST00000592395 SUPT6HQ7KZ85 1726 aaKnown RBP29.37■■■□□ 2.29
TCF3-216ENST00000592395 LRRC9Q6ZRR7 1453 aa29.36■■■□□ 2.29
TCF3-216ENST00000592395 RAPGEF3O95398 923 aa29.36■■■□□ 2.29
TCF3-216ENST00000592395 GPATCH8Q9UKJ3 1502 aaKnown RBP29.35■■■□□ 2.29
TCF3-216ENST00000592395 CCNB3Q8WWL7 1395 aa29.34■■■□□ 2.29
TCF3-216ENST00000592395 SCAPERQ9BY12 1400 aa29.34■■■□□ 2.29
TCF3-216ENST00000592395 ITSN2Q9NZM3 1697 aa29.32■■■□□ 2.28
TCF3-216ENST00000592395 APLP2Q06481 763 aa29.31■■■□□ 2.28
TCF3-216ENST00000592395 POGZQ7Z3K3 1410 aa29.3■■■□□ 2.28
TCF3-216ENST00000592395 NCOA2Q15596 1464 aa29.29■■■□□ 2.28
TCF3-216ENST00000592395 ABCC1P33527 1531 aa29.28■■■□□ 2.28
TCF3-216ENST00000592395 ZMYM4Q5VZL5 1548 aa29.28■■■□□ 2.28
TCF3-216ENST00000592395 KANK4Q5T7N3 995 aaPredicted RBP29.25■■■□□ 2.27
TCF3-216ENST00000592395 SAMD9LQ8IVG5 1584 aa29.25■■■□□ 2.27
TCF3-216ENST00000592395 CFDP1Q9UEE9 299 aaPredicted RBP29.24■■■□□ 2.27
TCF3-216ENST00000592395 ZNF518AQ6AHZ1 1483 aa29.23■■■□□ 2.27
TCF3-216ENST00000592395 ARHGEF40Q8TER5 1519 aa29.21■■■□□ 2.27
TCF3-216ENST00000592395 ZNF777Q9ULD5 760 aaPredicted RBP29.2■■■□□ 2.26
TCF3-216ENST00000592395 MAGI2Q86UL8 1455 aa29.2■■■□□ 2.26
TCF3-216ENST00000592395 ARHGEF12Q9NZN5 1544 aa29.2■■■□□ 2.26
TCF3-216ENST00000592395 KDM5CP41229 1560 aa29.19■■■□□ 2.26
TCF3-216ENST00000592395 PLEKHH2Q8IVE3 1493 aa29.18■■■□□ 2.26
TCF3-216ENST00000592395 ZFYVE16Q7Z3T8 1539 aa29.17■■■□□ 2.26
TCF3-216ENST00000592395 SYCP2Q9BX26 1530 aa29.16■■■□□ 2.26
TCF3-216ENST00000592395 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
TCF3-216ENST00000592395 TRAPPC8Q9Y2L5 1435 aa29.14■■■□□ 2.26
TCF3-216ENST00000592395 AFAP1Q8N556 730 aa29.13■■■□□ 2.25
TCF3-216ENST00000592395 HECW2Q9P2P5 1572 aa29.12■■■□□ 2.25
TCF3-216ENST00000592395 YEATS2Q9ULM3 1422 aa29.11■■■□□ 2.25
TCF3-216ENST00000592395 MYOM3Q5VTT5 1437 aa29.07■■■□□ 2.24
TCF3-216ENST00000592395 MLH3Q9UHC1 1453 aa29.07■■■□□ 2.24
TCF3-216ENST00000592395 CAMSAP2Q08AD1 1489 aa29.06■■■□□ 2.24
TCF3-216ENST00000592395 ZNF644Q9H582 1327 aaPredicted RBP29.06■■■□□ 2.24
TCF3-216ENST00000592395 HNRNPMP52272 730 aaKnown RBP eCLIP29.06■■■□□ 2.24
TCF3-216ENST00000592395 MIA2Q96PC5 1412 aa29.03■■■□□ 2.24
TCF3-216ENST00000592395 KDM4FA0A1W2PPD8 638 aa29.03■■■□□ 2.24
TCF3-216ENST00000592395 MBD5Q9P267 1494 aa29.03■■■□□ 2.24
TCF3-216ENST00000592395 KIDINS220Q9ULH0 1771 aa29.01■■■□□ 2.23
TCF3-216ENST00000592395 MYT1LQ9UL68 1186 aa29.01■■■□□ 2.23
TCF3-216ENST00000592395 ATP10AO60312 1499 aa29.01■■■□□ 2.23
TCF3-216ENST00000592395 DIP2CQ9Y2E4 1556 aa29.01■■■□□ 2.23
TCF3-216ENST00000592395 ABCA6Q8N139 1617 aa29■■■□□ 2.23
TCF3-216ENST00000592395 C9orf84Q5VXU9 1444 aa29■■■□□ 2.23
TCF3-216ENST00000592395 SIGLEC1Q9BZZ2 1709 aa28.97■■■□□ 2.23
TCF3-216ENST00000592395 INO80Q9ULG1 1556 aaPredicted RBP28.97■■■□□ 2.23
TCF3-216ENST00000592395 SPAG9O60271 1321 aaKnown RBP28.96■■■□□ 2.23
TCF3-216ENST00000592395 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
TCF3-216ENST00000592395 REREQ9P2R6 1566 aa28.96■■■□□ 2.23
TCF3-216ENST00000592395 ARID4BQ4LE39 1312 aaPredicted RBP28.95■■■□□ 2.23
TCF3-216ENST00000592395 ATP7AQ04656 1500 aa28.95■■■□□ 2.23
TCF3-216ENST00000592395 BCORL1Q5H9F3 1711 aa28.95■■■□□ 2.23
TCF3-216ENST00000592395 CCDC141Q6ZP82 1450 aa28.95■■■□□ 2.22
TCF3-216ENST00000592395 RSPH4AQ5TD94 716 aa28.93■■■□□ 2.22
TCF3-216ENST00000592395 PTPN23Q9H3S7 1636 aa28.92■■■□□ 2.22
TCF3-216ENST00000592395 ADAMTSL3P82987 1691 aa28.91■■■□□ 2.22
TCF3-216ENST00000592395 FGD6Q6ZV73 1430 aa28.9■■■□□ 2.22
TCF3-216ENST00000592395 RTEL1-TNFRSF6BF6WH68 1400 aa28.87■■■□□ 2.21
TCF3-216ENST00000592395 TCOF1Q13428 1488 aaKnown RBP28.85■■■□□ 2.21
TCF3-216ENST00000592395 ADGBQ8N7X0 1667 aa28.84■■■□□ 2.21
TCF3-216ENST00000592395 AGLP35573 1532 aa28.84■■■□□ 2.21
TCF3-216ENST00000592395 MADDQ8WXG6 1647 aa28.82■■■□□ 2.2
TCF3-216ENST00000592395 MAST1Q9Y2H9 1570 aa28.8■■■□□ 2.2
TCF3-216ENST00000592395 TSPY4P0CV99 314 aa28.8■■■□□ 2.2
TCF3-216ENST00000592395 TSPY10P0CW01 314 aa28.8■■■□□ 2.2
TCF3-216ENST00000592395 PLXNC1O60486 1568 aa28.79■■■□□ 2.2
TCF3-216ENST00000592395 A2MP01023 1474 aa28.78■■■□□ 2.2
TCF3-216ENST00000592395 CROCC2H7BZ55 1655 aa28.77■■■□□ 2.2
TCF3-216ENST00000592395 DNMT1P26358 1616 aaKnown RBP28.76■■■□□ 2.2
TCF3-216ENST00000592395 PPARGC1BQ86YN6 1023 aaKnown RBP28.76■■■□□ 2.19
TCF3-216ENST00000592395 FER1L4A9Z1Z3 1794 aa28.75■■■□□ 2.19
TCF3-216ENST00000592395 MLECQ14165 292 aa28.75■■■□□ 2.19
TCF3-216ENST00000592395 RIMS1Q86UR5 1692 aaKnown RBP28.74■■■□□ 2.19
TCF3-216ENST00000592395 SHANK2Q9UPX8 1470 aa28.73■■■□□ 2.19
TCF3-216ENST00000592395 ABCC5O15440 1437 aa28.72■■■□□ 2.19
TCF3-216ENST00000592395 DAPK1P53355 1430 aa28.72■■■□□ 2.19
TCF3-216ENST00000592395 PTPRMP28827 1452 aa28.72■■■□□ 2.19
TCF3-216ENST00000592395 DHX29Q7Z478 1369 aaKnown RBP28.69■■■□□ 2.18
TCF3-216ENST00000592395 FAM50AQ14320 339 aaKnown RBP28.67■■■□□ 2.18
TCF3-216ENST00000592395 DUOX2Q9NRD8 1548 aa28.58■■■□□ 2.17
TCF3-216ENST00000592395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.57■■■□□ 2.16
TCF3-216ENST00000592395 EIF2AK4Q9P2K8 1649 aaKnown RBP28.57■■■□□ 2.16
TCF3-216ENST00000592395 ESF1Q9H501 851 aaKnown RBP28.56■■■□□ 2.16
TCF3-216ENST00000592395 KIF15Q9NS87 1388 aa28.56■■■□□ 2.16
TCF3-216ENST00000592395 CNTLNQ9NXG0 1405 aa28.56■■■□□ 2.16
TCF3-216ENST00000592395 ADGRL2O95490 1459 aa28.54■■■□□ 2.16
TCF3-216ENST00000592395 ANKRD30AQ9BXX3 1397 aa28.54■■■□□ 2.16
TCF3-216ENST00000592395 KIF3BO15066 747 aa28.54■■■□□ 2.16
TCF3-216ENST00000592395 GGT6Q6P531 493 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms