RNA–Protein interactions for RNA: ENST00000592242.1

PPP6R1-208, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 4

Gene PPP6R1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-208ENST00000592242 NUP153P49790 1475 aaKnown RBP19.92■□□□□ 0.78
PPP6R1-208ENST00000592242 PREX1Q8TCU6 1659 aa19.92■□□□□ 0.78
PPP6R1-208ENST00000592242 FER1L4A9Z1Z3 1794 aa19.91■□□□□ 0.78
PPP6R1-208ENST00000592242 UHRF1BP1Q6BDS2 1440 aa19.9■□□□□ 0.78
PPP6R1-208ENST00000592242 IQSEC2Q5JU85 1478 aa19.9■□□□□ 0.78
PPP6R1-208ENST00000592242 CFAP74Q9C0B2 1584 aa19.9■□□□□ 0.78
PPP6R1-208ENST00000592242 HECW1Q76N89 1606 aa19.89■□□□□ 0.77
PPP6R1-208ENST00000592242 ATP10AO60312 1499 aa19.88■□□□□ 0.77
PPP6R1-208ENST00000592242 LTBP4Q8N2S1 1624 aa19.87■□□□□ 0.77
PPP6R1-208ENST00000592242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.87■□□□□ 0.773e-9■■□□□ 11.8
PPP6R1-208ENST00000592242 SAMD9Q5K651 1589 aa19.87■□□□□ 0.77
PPP6R1-208ENST00000592242 SCAPERQ9BY12 1400 aa19.86■□□□□ 0.77
PPP6R1-208ENST00000592242 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
PPP6R1-208ENST00000592242 SETD1BQ9UPS6 1966 aaKnown RBP19.81■□□□□ 0.76
PPP6R1-208ENST00000592242 PLCH2O75038 1416 aa19.8■□□□□ 0.76
PPP6R1-208ENST00000592242 NCOA1Q15788 1441 aa19.75■□□□□ 0.75
PPP6R1-208ENST00000592242 EFCAB2Q5VUJ9 269 aa19.74■□□□□ 0.75
PPP6R1-208ENST00000592242 TRAPPC8Q9Y2L5 1435 aa19.74■□□□□ 0.75
PPP6R1-208ENST00000592242 UBAP1LF5GYI3 381 aa19.72■□□□□ 0.75
PPP6R1-208ENST00000592242 AFAP1Q8N556 730 aa19.69■□□□□ 0.74
PPP6R1-208ENST00000592242 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
PPP6R1-208ENST00000592242 ZNF518AQ6AHZ1 1483 aa19.67■□□□□ 0.74
PPP6R1-208ENST00000592242 ZNF335Q9H4Z2 1342 aaPredicted RBP19.66■□□□□ 0.74
PPP6R1-208ENST00000592242 RANGAP1P46060 587 aaPredicted RBP19.65■□□□□ 0.74
PPP6R1-208ENST00000592242 REREQ9P2R6 1566 aa19.65■□□□□ 0.74
PPP6R1-208ENST00000592242 ESF1Q9H501 851 aaKnown RBP19.64■□□□□ 0.73
PPP6R1-208ENST00000592242 C3P01024 1663 aa19.63■□□□□ 0.73
PPP6R1-208ENST00000592242 KDM5CP41229 1560 aa19.63■□□□□ 0.73
PPP6R1-208ENST00000592242 CDK13Q14004 1512 aaKnown RBP19.62■□□□□ 0.73
PPP6R1-208ENST00000592242 NCKAP5LQ9HCH0 1330 aa19.62■□□□□ 0.73
PPP6R1-208ENST00000592242 AGLP35573 1532 aa19.61■□□□□ 0.73
PPP6R1-208ENST00000592242 MYT1LQ9UL68 1186 aa19.61■□□□□ 0.73
PPP6R1-208ENST00000592242 DIP2CQ9Y2E4 1556 aa19.61■□□□□ 0.73
PPP6R1-208ENST00000592242 CNTLNQ9NXG0 1405 aa19.6■□□□□ 0.73
PPP6R1-208ENST00000592242 MLH3Q9UHC1 1453 aa19.6■□□□□ 0.73
PPP6R1-208ENST00000592242 CAMSAP1Q5T5Y3 1602 aa19.59■□□□□ 0.73
PPP6R1-208ENST00000592242 NPATQ14207 1427 aa19.58■□□□□ 0.72
PPP6R1-208ENST00000592242 HSPA1LP34931 641 aa19.57■□□□□ 0.72
PPP6R1-208ENST00000592242 PKD2Q13563 968 aa19.57■□□□□ 0.72
PPP6R1-208ENST00000592242 MED1Q15648 1581 aaPredicted RBP19.56■□□□□ 0.72
PPP6R1-208ENST00000592242 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
PPP6R1-208ENST00000592242 ABCA6Q8N139 1617 aa19.52■□□□□ 0.72
PPP6R1-208ENST00000592242 MYO5CQ9NQX4 1742 aa19.52■□□□□ 0.72
PPP6R1-208ENST00000592242 ZMYM3Q14202 1370 aa19.52■□□□□ 0.72
PPP6R1-208ENST00000592242 PLA2R1Q13018 1463 aa19.52■□□□□ 0.72
PPP6R1-208ENST00000592242 ARHGAP5Q13017 1502 aa19.51■□□□□ 0.71
PPP6R1-208ENST00000592242 TCOF1Q13428 1488 aaKnown RBP19.5■□□□□ 0.71
PPP6R1-208ENST00000592242 TOM1O60784 492 aa19.49■□□□□ 0.71
PPP6R1-208ENST00000592242 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
PPP6R1-208ENST00000592242 PIP4K2BP78356 416 aa19.47■□□□□ 0.71
PPP6R1-208ENST00000592242 TROQ12816 1431 aaPredicted RBP19.47■□□□□ 0.71
PPP6R1-208ENST00000592242 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
PPP6R1-208ENST00000592242 KIF14Q15058 1648 aa19.45■□□□□ 0.7
PPP6R1-208ENST00000592242 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
PPP6R1-208ENST00000592242 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
PPP6R1-208ENST00000592242 MROH2AA6NES4 1674 aa19.43■□□□□ 0.7
PPP6R1-208ENST00000592242 CLIP1P30622 1438 aa19.41■□□□□ 0.7
PPP6R1-208ENST00000592242 EEA1Q15075 1411 aa19.41■□□□□ 0.7
PPP6R1-208ENST00000592242 PTPRKQ15262 1439 aa19.41■□□□□ 0.7
PPP6R1-208ENST00000592242 FMN1Q68DA7 1419 aa19.41■□□□□ 0.7
PPP6R1-208ENST00000592242 ABCC1P33527 1531 aa19.39■□□□□ 0.69
PPP6R1-208ENST00000592242 ZNF142P52746 1687 aaPredicted RBP19.38■□□□□ 0.69
PPP6R1-208ENST00000592242 KIDINS220Q9ULH0 1771 aa19.38■□□□□ 0.69
PPP6R1-208ENST00000592242 CEP170BQ9Y4F5 1589 aaPredicted RBP19.37■□□□□ 0.69
PPP6R1-208ENST00000592242 CPS1P31327 1500 aa19.37■□□□□ 0.69
PPP6R1-208ENST00000592242 CDC42BPBQ9Y5S2 1711 aa19.35■□□□□ 0.69
PPP6R1-208ENST00000592242 MYO3AQ8NEV4 1616 aa19.35■□□□□ 0.69
PPP6R1-208ENST00000592242 SHANK2Q9UPX8 1470 aa19.35■□□□□ 0.69
PPP6R1-208ENST00000592242 SPAG9O60271 1321 aaKnown RBP19.31■□□□□ 0.68
PPP6R1-208ENST00000592242 ITSN2Q9NZM3 1697 aa19.31■□□□□ 0.68
PPP6R1-208ENST00000592242 A2ML1A8K2U0 1454 aa19.3■□□□□ 0.68
PPP6R1-208ENST00000592242 RGS17Q9UGC6 210 aaPredicted RBP19.3■□□□□ 0.68
PPP6R1-208ENST00000592242 SAMD9LQ8IVG5 1584 aa19.3■□□□□ 0.68
PPP6R1-208ENST00000592242 PREX2Q70Z35 1606 aa19.29■□□□□ 0.68
PPP6R1-208ENST00000592242 ALKQ9UM73 1620 aa19.29■□□□□ 0.68
PPP6R1-208ENST00000592242 GGT6Q6P531 493 aa19.29■□□□□ 0.68
PPP6R1-208ENST00000592242 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
PPP6R1-208ENST00000592242 CLTCQ00610 1675 aaKnown RBP19.27■□□□□ 0.67
PPP6R1-208ENST00000592242 DNMT1P26358 1616 aaKnown RBP19.26■□□□□ 0.67
PPP6R1-208ENST00000592242 A2MP01023 1474 aa19.25■□□□□ 0.67
PPP6R1-208ENST00000592242 PLXNC1O60486 1568 aa19.24■□□□□ 0.67
PPP6R1-208ENST00000592242 NEURL4Q96JN8 1562 aa19.24■□□□□ 0.67
PPP6R1-208ENST00000592242 HNRNPMP52272 730 aaKnown RBP eCLIP19.24■□□□□ 0.676e-6■■■■□ 20.3
PPP6R1-208ENST00000592242 SUPT6HQ7KZ85 1726 aaKnown RBP19.23■□□□□ 0.67
PPP6R1-208ENST00000592242 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
PPP6R1-208ENST00000592242 ANKLE2Q86XL3 938 aa19.22■□□□□ 0.67
PPP6R1-208ENST00000592242 VWDEQ8N2E2 1590 aa19.22■□□□□ 0.67
PPP6R1-208ENST00000592242 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
PPP6R1-208ENST00000592242 KIAA1107Q9UPP5 1409 aa19.19■□□□□ 0.66
PPP6R1-208ENST00000592242 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
PPP6R1-208ENST00000592242 TNRQ92752 1358 aa19.19■□□□□ 0.66
PPP6R1-208ENST00000592242 FBXO31Q5XUX0 539 aaPredicted RBP19.18■□□□□ 0.66
PPP6R1-208ENST00000592242 SYCP2Q9BX26 1530 aa19.18■□□□□ 0.66
PPP6R1-208ENST00000592242 MED14O60244 1454 aa19.17■□□□□ 0.66
PPP6R1-208ENST00000592242 THEMISQ8N1K5 641 aaPredicted RBP19.17■□□□□ 0.66
PPP6R1-208ENST00000592242 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
PPP6R1-208ENST00000592242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.17■□□□□ 0.66
PPP6R1-208ENST00000592242 LRRIQ1Q96JM4 1722 aa19.17■□□□□ 0.66
PPP6R1-208ENST00000592242 NPHP4O75161 1426 aaPredicted RBP19.16■□□□□ 0.66
PPP6R1-208ENST00000592242 GPATCH8Q9UKJ3 1502 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms