RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 ZFYVE16Q7Z3T8 1539 aa15.21■□□□□ 0.03
APOC1-207ENST00000592176 EFCAB5A4FU69 1503 aa15.2■□□□□ 0.02
APOC1-207ENST00000592176 ZMYM4Q5VZL5 1548 aa15.19■□□□□ 0.02
APOC1-207ENST00000592176 CEBPAP49715 358 aaPredicted RBP15.19■□□□□ 0.02
APOC1-207ENST00000592176 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
APOC1-207ENST00000592176 CDK13Q14004 1512 aaKnown RBP15.18■□□□□ 0.02
APOC1-207ENST00000592176 ATP10AO60312 1499 aa15.18■□□□□ 0.02
APOC1-207ENST00000592176 TTC37Q6PGP7 1564 aa15.18■□□□□ 0.02
APOC1-207ENST00000592176 HECW1Q76N89 1606 aa15.17■□□□□ 0.02
APOC1-207ENST00000592176 AFAP1Q8N556 730 aa15.17■□□□□ 0.02
APOC1-207ENST00000592176 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
APOC1-207ENST00000592176 FMN1Q68DA7 1419 aa15.15■□□□□ 0.02
APOC1-207ENST00000592176 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
APOC1-207ENST00000592176 SIGLEC1Q9BZZ2 1709 aa15.12■□□□□ 0.01
APOC1-207ENST00000592176 ESF1Q9H501 851 aaKnown RBP15.1■□□□□ 0.01
APOC1-207ENST00000592176 ARHGEF12Q9NZN5 1544 aa15.1■□□□□ 0.01
APOC1-207ENST00000592176 TROQ12816 1431 aaPredicted RBP15.09■□□□□ 0.01
APOC1-207ENST00000592176 CLIP1P30622 1438 aa15.08■□□□□ 0
APOC1-207ENST00000592176 ZNF518AQ6AHZ1 1483 aa15.08■□□□□ 0
APOC1-207ENST00000592176 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0
APOC1-207ENST00000592176 FER1L4A9Z1Z3 1794 aa15.06■□□□□ 0
APOC1-207ENST00000592176 ARHGAP5Q13017 1502 aa15.06■□□□□ 0
APOC1-207ENST00000592176 UHRF1BP1Q6BDS2 1440 aa15.05■□□□□ -0
APOC1-207ENST00000592176 MYO5CQ9NQX4 1742 aa15.03■□□□□ -0
APOC1-207ENST00000592176 CHIC1Q5VXU3 224 aa15.02■□□□□ -0
APOC1-207ENST00000592176 KIF14Q15058 1648 aa15.02□□□□□ -0.01
APOC1-207ENST00000592176 MLH3Q9UHC1 1453 aa15.01□□□□□ -0.01
APOC1-207ENST00000592176 DISP3Q9P2K9 1392 aa15□□□□□ -0.01
APOC1-207ENST00000592176 TRAPPC8Q9Y2L5 1435 aa15□□□□□ -0.01
APOC1-207ENST00000592176 PREX1Q8TCU6 1659 aa15□□□□□ -0.01
APOC1-207ENST00000592176 KDM5CP41229 1560 aa14.99□□□□□ -0.01
APOC1-207ENST00000592176 ZNF777Q9ULD5 760 aaPredicted RBP14.99□□□□□ -0.01
APOC1-207ENST00000592176 PTPRTO14522 1441 aa14.99□□□□□ -0.01
APOC1-207ENST00000592176 DIP2CQ9Y2E4 1556 aa14.97□□□□□ -0.01
APOC1-207ENST00000592176 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
APOC1-207ENST00000592176 ILDR2Q71H61 639 aa14.96□□□□□ -0.01
APOC1-207ENST00000592176 REREQ9P2R6 1566 aa14.95□□□□□ -0.02
APOC1-207ENST00000592176 HNRNPMP52272 730 aaKnown RBP eCLIP14.95□□□□□ -0.02
APOC1-207ENST00000592176 AGLP35573 1532 aa14.95□□□□□ -0.02
APOC1-207ENST00000592176 STRCQ7RTU9 1775 aa14.95□□□□□ -0.02
APOC1-207ENST00000592176 SPAG9O60271 1321 aaKnown RBP14.94□□□□□ -0.02
APOC1-207ENST00000592176 CASKIN1Q8WXD9 1431 aa14.94□□□□□ -0.02
APOC1-207ENST00000592176 CNTLNQ9NXG0 1405 aa14.94□□□□□ -0.02
APOC1-207ENST00000592176 SOCS7O14512 581 aa14.93□□□□□ -0.02
APOC1-207ENST00000592176 ZMYM3Q14202 1370 aa14.92□□□□□ -0.02
APOC1-207ENST00000592176 CCDC18Q5T9S5 1454 aa14.92□□□□□ -0.02
APOC1-207ENST00000592176 CDC42BPBQ9Y5S2 1711 aa14.92□□□□□ -0.02
APOC1-207ENST00000592176 ABCA6Q8N139 1617 aa14.91□□□□□ -0.02
APOC1-207ENST00000592176 NCKAP5LQ9HCH0 1330 aa14.91□□□□□ -0.02
APOC1-207ENST00000592176 CFDP1Q9UEE9 299 aaPredicted RBP14.9□□□□□ -0.02
APOC1-207ENST00000592176 ABCC1P33527 1531 aa14.9□□□□□ -0.02
APOC1-207ENST00000592176 GGT6Q6P531 493 aa14.89□□□□□ -0.03
APOC1-207ENST00000592176 C3P01024 1663 aa14.89□□□□□ -0.03
APOC1-207ENST00000592176 NCOA1Q15788 1441 aa14.89□□□□□ -0.03
APOC1-207ENST00000592176 PREX2Q70Z35 1606 aa14.88□□□□□ -0.03
APOC1-207ENST00000592176 LRRIQ1Q96JM4 1722 aa14.87□□□□□ -0.03
APOC1-207ENST00000592176 NPATQ14207 1427 aa14.87□□□□□ -0.03
APOC1-207ENST00000592176 GPATCH8Q9UKJ3 1502 aaKnown RBP14.87□□□□□ -0.03
APOC1-207ENST00000592176 PKD2Q13563 968 aa14.86□□□□□ -0.03
APOC1-207ENST00000592176 KIDINS220Q9ULH0 1771 aa14.85□□□□□ -0.03
APOC1-207ENST00000592176 LTBP4Q8N2S1 1624 aa14.85□□□□□ -0.03
APOC1-207ENST00000592176 UBAP1LF5GYI3 381 aa14.85□□□□□ -0.03
APOC1-207ENST00000592176 PPP6R1Q9UPN7 881 aa14.85□□□□□ -0.03
APOC1-207ENST00000592176 SAMD9LQ8IVG5 1584 aa14.85□□□□□ -0.03
APOC1-207ENST00000592176 ITSN2Q9NZM3 1697 aa14.84□□□□□ -0.03
APOC1-207ENST00000592176 ZNF335Q9H4Z2 1342 aaPredicted RBP14.84□□□□□ -0.03
APOC1-207ENST00000592176 CCNB3Q8WWL7 1395 aa14.84□□□□□ -0.03
APOC1-207ENST00000592176 KIAA1107Q9UPP5 1409 aa14.83□□□□□ -0.03
APOC1-207ENST00000592176 IQSEC2Q5JU85 1478 aa14.83□□□□□ -0.03
APOC1-207ENST00000592176 FYCO1Q9BQS8 1478 aa14.82□□□□□ -0.04
APOC1-207ENST00000592176 CAMSAP1Q5T5Y3 1602 aa14.82□□□□□ -0.04
APOC1-207ENST00000592176 PLEKHH2Q8IVE3 1493 aa14.82□□□□□ -0.04
APOC1-207ENST00000592176 A2MP01023 1474 aa14.81□□□□□ -0.04
APOC1-207ENST00000592176 CDC42BPAQ5VT25 1732 aa14.8□□□□□ -0.04
APOC1-207ENST00000592176 MTUS2Q5JR59 1369 aa14.8□□□□□ -0.04
APOC1-207ENST00000592176 SYCP2Q9BX26 1530 aa14.8□□□□□ -0.04
APOC1-207ENST00000592176 PTPRKQ15262 1439 aa14.79□□□□□ -0.04
APOC1-207ENST00000592176 ZNF644Q9H582 1327 aaPredicted RBP14.79□□□□□ -0.04
APOC1-207ENST00000592176 ATP7AQ04656 1500 aa14.77□□□□□ -0.04
APOC1-207ENST00000592176 SUPT6HQ7KZ85 1726 aaKnown RBP14.77□□□□□ -0.05
APOC1-207ENST00000592176 MROH2AA6NES4 1674 aa14.77□□□□□ -0.05
APOC1-207ENST00000592176 PLA2R1Q13018 1463 aa14.76□□□□□ -0.05
APOC1-207ENST00000592176 DHX29Q7Z478 1369 aaKnown RBP14.74□□□□□ -0.05
APOC1-207ENST00000592176 SPATA31D1Q6ZQQ2 1576 aa14.74□□□□□ -0.05
APOC1-207ENST00000592176 KIF3BO15066 747 aa14.74□□□□□ -0.05
APOC1-207ENST00000592176 FBXO31Q5XUX0 539 aaPredicted RBP14.74□□□□□ -0.05
APOC1-207ENST00000592176 TCOF1Q13428 1488 aaKnown RBP14.73□□□□□ -0.05
APOC1-207ENST00000592176 CLTCQ00610 1675 aaKnown RBP14.73□□□□□ -0.05
APOC1-207ENST00000592176 TOM1O60784 492 aa14.72□□□□□ -0.05
APOC1-207ENST00000592176 RSPH4AQ5TD94 716 aa14.72□□□□□ -0.05
APOC1-207ENST00000592176 RTEL1-TNFRSF6BF6WH68 1400 aa14.72□□□□□ -0.05
APOC1-207ENST00000592176 PLXNC1O60486 1568 aa14.72□□□□□ -0.05
APOC1-207ENST00000592176 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
APOC1-207ENST00000592176 WASHC2CQ9Y4E1 1318 aa14.71□□□□□ -0.05
APOC1-207ENST00000592176 PIP4K2BP78356 416 aa14.71□□□□□ -0.05
APOC1-207ENST00000592176 CEP170BQ9Y4F5 1589 aaPredicted RBP14.71□□□□□ -0.05
APOC1-207ENST00000592176 MBD5Q9P267 1494 aa14.7□□□□□ -0.06
APOC1-207ENST00000592176 INO80Q9ULG1 1556 aaPredicted RBP14.7□□□□□ -0.06
APOC1-207ENST00000592176 ANKLE2Q86XL3 938 aa14.7□□□□□ -0.06
APOC1-207ENST00000592176 THEMISQ8N1K5 641 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms