RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 ATP1B4Q9UN42 357 aaPredicted RBP26.21■■□□□ 1.79
GCDH-213ENST00000590627 POGZQ7Z3K3 1410 aa26.2■■□□□ 1.78
GCDH-213ENST00000590627 SCAPERQ9BY12 1400 aa26.19■■□□□ 1.78
GCDH-213ENST00000590627 MYO5CQ9NQX4 1742 aa26.19■■□□□ 1.78
GCDH-213ENST00000590627 YEATS2Q9ULM3 1422 aa26.18■■□□□ 1.78
GCDH-213ENST00000590627 RIMS1Q86UR5 1692 aaKnown RBP26.17■■□□□ 1.78
GCDH-213ENST00000590627 EFCAB2Q5VUJ9 269 aa26.16■■□□□ 1.78
GCDH-213ENST00000590627 KIF14Q15058 1648 aa26.15■■□□□ 1.78
GCDH-213ENST00000590627 PCF11O94913 1555 aaKnown RBP26.15■■□□□ 1.78
GCDH-213ENST00000590627 TROQ12816 1431 aaPredicted RBP26.14■■□□□ 1.78
GCDH-213ENST00000590627 CASKIN1Q8WXD9 1431 aa26.14■■□□□ 1.77
GCDH-213ENST00000590627 SIGLEC1Q9BZZ2 1709 aa26.12■■□□□ 1.77
GCDH-213ENST00000590627 LMTK3Q96Q04 1460 aa26.11■■□□□ 1.77
GCDH-213ENST00000590627 LRRIQ1Q96JM4 1722 aa26.09■■□□□ 1.77
GCDH-213ENST00000590627 FYCO1Q9BQS8 1478 aa26.09■■□□□ 1.77
GCDH-213ENST00000590627 ATP10AO60312 1499 aa26.07■■□□□ 1.76
GCDH-213ENST00000590627 ZNF518AQ6AHZ1 1483 aa26.05■■□□□ 1.76
GCDH-213ENST00000590627 ARHGAP5Q13017 1502 aa26.05■■□□□ 1.76
GCDH-213ENST00000590627 C9orf84Q5VXU9 1444 aa26.05■■□□□ 1.76
GCDH-213ENST00000590627 CCDC18Q5T9S5 1454 aa26.04■■□□□ 1.76
GCDH-213ENST00000590627 FER1L4A9Z1Z3 1794 aa26.03■■□□□ 1.76
GCDH-213ENST00000590627 KDM5CP41229 1560 aa26.02■■□□□ 1.76
GCDH-213ENST00000590627 ARHGEF12Q9NZN5 1544 aa26■■□□□ 1.75
GCDH-213ENST00000590627 MLECQ14165 292 aa26■■□□□ 1.75
GCDH-213ENST00000590627 CDC42BPBQ9Y5S2 1711 aa25.99■■□□□ 1.75
GCDH-213ENST00000590627 FBXO41Q8TF61 875 aa25.97■■□□□ 1.75
GCDH-213ENST00000590627 AFAP1Q8N556 730 aa25.96■■□□□ 1.75
GCDH-213ENST00000590627 PREX2Q70Z35 1606 aa25.96■■□□□ 1.75
GCDH-213ENST00000590627 MAP3K1Q13233 1512 aa25.95■■□□□ 1.74
GCDH-213ENST00000590627 PLPPR3Q6T4P5 718 aa25.94■■□□□ 1.74
GCDH-213ENST00000590627 MLH3Q9UHC1 1453 aa25.92■■□□□ 1.74
GCDH-213ENST00000590627 REREQ9P2R6 1566 aa25.92■■□□□ 1.74
GCDH-213ENST00000590627 DIP2CQ9Y2E4 1556 aa25.91■■□□□ 1.74
GCDH-213ENST00000590627 HSPA2P54652 639 aa25.91■■□□□ 1.74
GCDH-213ENST00000590627 ABCC1P33527 1531 aa25.9■■□□□ 1.74
GCDH-213ENST00000590627 APLP2Q06481 763 aa25.9■■□□□ 1.74
GCDH-213ENST00000590627 MYT1LQ9UL68 1186 aa25.88■■□□□ 1.73
GCDH-213ENST00000590627 ITSN2Q9NZM3 1697 aa25.87■■□□□ 1.73
GCDH-213ENST00000590627 TIAM1Q13009 1591 aa25.86■■□□□ 1.73
GCDH-213ENST00000590627 CDC42BPAQ5VT25 1732 aa25.86■■□□□ 1.73
GCDH-213ENST00000590627 ABCA6Q8N139 1617 aa25.86■■□□□ 1.73
GCDH-213ENST00000590627 TRAPPC8Q9Y2L5 1435 aa25.86■■□□□ 1.73
GCDH-213ENST00000590627 PREX1Q8TCU6 1659 aa25.86■■□□□ 1.73
GCDH-213ENST00000590627 AGLP35573 1532 aa25.83■■□□□ 1.72
GCDH-213ENST00000590627 CEBPAP49715 358 aaPredicted RBP25.79■■□□□ 1.72
GCDH-213ENST00000590627 KIDINS220Q9ULH0 1771 aa25.79■■□□□ 1.72
GCDH-213ENST00000590627 SETD1BQ9UPS6 1966 aaKnown RBP25.78■■□□□ 1.72
GCDH-213ENST00000590627 LRRC9Q6ZRR7 1453 aa25.77■■□□□ 1.72
GCDH-213ENST00000590627 KANK4Q5T7N3 995 aaPredicted RBP25.76■■□□□ 1.71
GCDH-213ENST00000590627 GPATCH8Q9UKJ3 1502 aaKnown RBP25.76■■□□□ 1.71
GCDH-213ENST00000590627 SAMD9LQ8IVG5 1584 aa25.75■■□□□ 1.71
GCDH-213ENST00000590627 UHRF1BP1Q6BDS2 1440 aa25.74■■□□□ 1.71
GCDH-213ENST00000590627 MTUS2Q5JR59 1369 aa25.72■■□□□ 1.71
GCDH-213ENST00000590627 C3P01024 1663 aa25.72■■□□□ 1.71
GCDH-213ENST00000590627 ESF1Q9H501 851 aaKnown RBP25.72■■□□□ 1.71
GCDH-213ENST00000590627 ZNF777Q9ULD5 760 aaPredicted RBP25.71■■□□□ 1.71
GCDH-213ENST00000590627 SYCP2Q9BX26 1530 aa25.71■■□□□ 1.71
GCDH-213ENST00000590627 EHBP1L1Q8N3D4 1523 aa25.69■■□□□ 1.7
GCDH-213ENST00000590627 PLEKHH2Q8IVE3 1493 aa25.69■■□□□ 1.7
GCDH-213ENST00000590627 CNTLNQ9NXG0 1405 aa25.69■■□□□ 1.7
GCDH-213ENST00000590627 KIAA1107Q9UPP5 1409 aa25.69■■□□□ 1.7
GCDH-213ENST00000590627 CERKQ8TCT0 537 aa25.67■■□□□ 1.7
GCDH-213ENST00000590627 DMRT2Q9Y5R5 561 aa25.67■■□□□ 1.7
GCDH-213ENST00000590627 SPAG9O60271 1321 aaKnown RBP25.66■■□□□ 1.7
GCDH-213ENST00000590627 CFDP1Q9UEE9 299 aaPredicted RBP25.66■■□□□ 1.7
GCDH-213ENST00000590627 STRCQ7RTU9 1775 aa25.66■■□□□ 1.7
GCDH-213ENST00000590627 CCNB3Q8WWL7 1395 aa25.66■■□□□ 1.7
GCDH-213ENST00000590627 HNRNPMP52272 730 aaKnown RBP eCLIP25.65■■□□□ 1.7
GCDH-213ENST00000590627 ATP7AQ04656 1500 aa25.63■■□□□ 1.69
GCDH-213ENST00000590627 PPARGC1BQ86YN6 1023 aaKnown RBP25.62■■□□□ 1.69
GCDH-213ENST00000590627 MROH2AA6NES4 1674 aa25.61■■□□□ 1.69
GCDH-213ENST00000590627 INO80Q9ULG1 1556 aaPredicted RBP25.61■■□□□ 1.69
GCDH-213ENST00000590627 SUPT6HQ7KZ85 1726 aaKnown RBP25.58■■□□□ 1.69
GCDH-213ENST00000590627 PLXNC1O60486 1568 aa25.58■■□□□ 1.69
GCDH-213ENST00000590627 NPATQ14207 1427 aa25.57■■□□□ 1.68
GCDH-213ENST00000590627 A2MP01023 1474 aa25.56■■□□□ 1.68
GCDH-213ENST00000590627 NCOA2Q15596 1464 aa25.56■■□□□ 1.68
GCDH-213ENST00000590627 PTPRTO14522 1441 aa25.55■■□□□ 1.68
GCDH-213ENST00000590627 ZMYM3Q14202 1370 aa25.54■■□□□ 1.68
GCDH-213ENST00000590627 ADGBQ8N7X0 1667 aa25.52■■□□□ 1.68
GCDH-213ENST00000590627 MBD5Q9P267 1494 aa25.5■■□□□ 1.67
GCDH-213ENST00000590627 NCOA1Q15788 1441 aa25.49■■□□□ 1.67
GCDH-213ENST00000590627 CLTCQ00610 1675 aaKnown RBP25.48■■□□□ 1.67
GCDH-213ENST00000590627 ZNF644Q9H582 1327 aaPredicted RBP25.48■■□□□ 1.67
GCDH-213ENST00000590627 PPP6R1Q9UPN7 881 aa25.48■■□□□ 1.67
GCDH-213ENST00000590627 RTEL1-TNFRSF6BF6WH68 1400 aa25.47■■□□□ 1.67
GCDH-213ENST00000590627 GGT6Q6P531 493 aa25.44■■□□□ 1.66
GCDH-213ENST00000590627 CAMSAP1Q5T5Y3 1602 aa25.43■■□□□ 1.66
GCDH-213ENST00000590627 MYOM3Q5VTT5 1437 aa25.43■■□□□ 1.66
GCDH-213ENST00000590627 PTPRKQ15262 1439 aa25.41■■□□□ 1.66
GCDH-213ENST00000590627 ZNF142P52746 1687 aaPredicted RBP25.41■■□□□ 1.66
GCDH-213ENST00000590627 MYO3AQ8NEV4 1616 aa25.4■■□□□ 1.66
GCDH-213ENST00000590627 LTBP4Q8N2S1 1624 aa25.39■■□□□ 1.66
GCDH-213ENST00000590627 DHX29Q7Z478 1369 aaKnown RBP25.39■■□□□ 1.65
GCDH-213ENST00000590627 CCDC141Q6ZP82 1450 aa25.39■■□□□ 1.65
GCDH-213ENST00000590627 MIA2Q96PC5 1412 aa25.38■■□□□ 1.65
GCDH-213ENST00000590627 RSPH4AQ5TD94 716 aa25.38■■□□□ 1.65
GCDH-213ENST00000590627 CEP170BQ9Y4F5 1589 aaPredicted RBP25.36■■□□□ 1.65
GCDH-213ENST00000590627 CAMSAP2Q08AD1 1489 aa25.36■■□□□ 1.65
GCDH-213ENST00000590627 PLA2R1Q13018 1463 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms