RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 DISP1Q96F81 1524 aa26.65■■□□□ 1.86
MBD3-207ENST00000590550 HNRNPUQ00839 825 aaKnown RBP eCLIP26.64■■□□□ 1.86
MBD3-207ENST00000590550 C11orf95C9JLR9 678 aaPredicted RBP26.64■■□□□ 1.86
MBD3-207ENST00000590550 DAPK1P53355 1430 aa26.63■■□□□ 1.85
MBD3-207ENST00000590550 AKNAQ7Z591 1439 aa26.63■■□□□ 1.85
MBD3-207ENST00000590550 NUP153P49790 1475 aaKnown RBP26.63■■□□□ 1.85
MBD3-207ENST00000590550 ABCC5O15440 1437 aa26.61■■□□□ 1.85
MBD3-207ENST00000590550 FBLN2P98095 1184 aa26.6■■□□□ 1.85
MBD3-207ENST00000590550 NBPF8Q3BBV2 869 aa26.6■■□□□ 1.85
MBD3-207ENST00000590550 KIAA0556O60303 1618 aa26.6■■□□□ 1.85
MBD3-207ENST00000590550 KIAA0586Q9BVV6 1533 aa26.59■■□□□ 1.85
MBD3-207ENST00000590550 CCDC184Q52MB2 194 aa26.59■■□□□ 1.85
MBD3-207ENST00000590550 SLC4A1APQ9BWU0 796 aaKnown RBP26.59■■□□□ 1.85
MBD3-207ENST00000590550 IFT140Q96RY7 1462 aa26.59■■□□□ 1.85
MBD3-207ENST00000590550 ZNF777Q9ULD5 760 aaPredicted RBP26.58■■□□□ 1.85
MBD3-207ENST00000590550 PRG4Q92954 1404 aaPredicted RBP26.57■■□□□ 1.84
MBD3-207ENST00000590550 IRX6P78412 446 aaPredicted RBP26.55■■□□□ 1.84
MBD3-207ENST00000590550 ANKRD30BQ9BXX2 1392 aa26.55■■□□□ 1.84
MBD3-207ENST00000590550 GRIN2AQ12879 1464 aa26.53■■□□□ 1.84
MBD3-207ENST00000590550 CDK11AQ9UQ88 783 aaPredicted RBP26.52■■□□□ 1.84
MBD3-207ENST00000590550 CFDP1Q9UEE9 299 aaPredicted RBP26.51■■□□□ 1.83
MBD3-207ENST00000590550 CHMP7Q8WUX9 453 aaPredicted RBP26.51■■□□□ 1.83
MBD3-207ENST00000590550 RAPGEF6Q8TEU7 1601 aa26.5■■□□□ 1.83
MBD3-207ENST00000590550 PLB1Q6P1J6 1458 aa26.5■■□□□ 1.83
MBD3-207ENST00000590550 DEKP35659 375 aaKnown RBP26.5■■□□□ 1.83
MBD3-207ENST00000590550 ROCK1Q13464 1354 aa26.5■■□□□ 1.83
MBD3-207ENST00000590550 DNMT1P26358 1616 aaKnown RBP26.49■■□□□ 1.83
MBD3-207ENST00000590550 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
MBD3-207ENST00000590550 CNGB1Q14028 1251 aaPredicted RBP26.49■■□□□ 1.83
MBD3-207ENST00000590550 RPRD2Q5VT52 1461 aaKnown RBP26.47■■□□□ 1.83
MBD3-207ENST00000590550 ANO8Q9HCE9 1232 aaPredicted RBP26.47■■□□□ 1.83
MBD3-207ENST00000590550 CNTLNQ9NXG0 1405 aa26.47■■□□□ 1.83
MBD3-207ENST00000590550 CCDC7Q96M83 1385 aa26.46■■□□□ 1.83
MBD3-207ENST00000590550 ZNF326Q5BKZ1 582 aaKnown RBP26.45■■□□□ 1.82
MBD3-207ENST00000590550 FANCIQ9NVI1 1328 aa26.45■■□□□ 1.82
MBD3-207ENST00000590550 FAM9BQ8IZU0 186 aa26.45■■□□□ 1.82
MBD3-207ENST00000590550 TEX14Q8IWB6 1497 aa26.44■■□□□ 1.82
MBD3-207ENST00000590550 NCOA1Q15788 1441 aa26.43■■□□□ 1.82
MBD3-207ENST00000590550 CAMSAP2Q08AD1 1489 aa26.42■■□□□ 1.82
MBD3-207ENST00000590550 PRKRIP1Q9H875 184 aaPredicted RBP26.41■■□□□ 1.82
MBD3-207ENST00000590550 TROQ12816 1431 aaPredicted RBP26.41■■□□□ 1.82
MBD3-207ENST00000590550 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
MBD3-207ENST00000590550 KIF7Q2M1P5 1343 aa26.39■■□□□ 1.82
MBD3-207ENST00000590550 POLR3GLQ9BT43 218 aa26.39■■□□□ 1.81
MBD3-207ENST00000590550 KIF14Q15058 1648 aa26.38■■□□□ 1.81
MBD3-207ENST00000590550 MRS2Q9HD23 443 aa26.38■■□□□ 1.81
MBD3-207ENST00000590550 PZPP20742 1482 aa26.38■■□□□ 1.81
MBD3-207ENST00000590550 CEP170Q5SW79 1584 aa26.37■■□□□ 1.81
MBD3-207ENST00000590550 GPATCH8Q9UKJ3 1502 aaKnown RBP26.37■■□□□ 1.81
MBD3-207ENST00000590550 JPH4Q96JJ6 628 aa26.35■■□□□ 1.81
MBD3-207ENST00000590550 PKD2Q13563 968 aa26.35■■□□□ 1.81
MBD3-207ENST00000590550 SPATA31E1Q6ZUB1 1445 aa26.31■■□□□ 1.8
MBD3-207ENST00000590550 SYNJ2O15056 1496 aa26.29■■□□□ 1.8
MBD3-207ENST00000590550 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
MBD3-207ENST00000590550 MYT1LQ9UL68 1186 aa26.27■■□□□ 1.8
MBD3-207ENST00000590550 SENP3-EIF4A1A0A087X0R7 540 aa26.27■■□□□ 1.8
MBD3-207ENST00000590550 NBR1Q14596 966 aa26.25■■□□□ 1.79
MBD3-207ENST00000590550 KIAA1107Q9UPP5 1409 aa26.24■■□□□ 1.79
MBD3-207ENST00000590550 PLEKHD1A6NEE1 506 aa26.24■■□□□ 1.79
MBD3-207ENST00000590550 CARMIL2Q6F5E8 1435 aa26.24■■□□□ 1.79
MBD3-207ENST00000590550 ANKRD30AQ9BXX3 1397 aa26.23■■□□□ 1.79
MBD3-207ENST00000590550 ITSN2Q9NZM3 1697 aa26.22■■□□□ 1.79
MBD3-207ENST00000590550 ANKRD50Q9ULJ7 1429 aa26.22■■□□□ 1.79
MBD3-207ENST00000590550 USP47Q96K76 1375 aa26.21■■□□□ 1.79
MBD3-207ENST00000590550 SALL2Q9Y467 1007 aaPredicted RBP26.2■■□□□ 1.79
MBD3-207ENST00000590550 NUP155O75694 1391 aa26.2■■□□□ 1.78
MBD3-207ENST00000590550 KDM2AQ9Y2K7 1162 aa26.18■■□□□ 1.78
MBD3-207ENST00000590550 ADGBQ8N7X0 1667 aa26.18■■□□□ 1.78
MBD3-207ENST00000590550 HNRNPMP52272 730 aaKnown RBP eCLIP26.18■■□□□ 1.78
MBD3-207ENST00000590550 ADGRL2O95490 1459 aa26.16■■□□□ 1.78
MBD3-207ENST00000590550 NUP160Q12769 1436 aa26.16■■□□□ 1.78
MBD3-207ENST00000590550 MBD5Q9P267 1494 aa26.15■■□□□ 1.78
MBD3-207ENST00000590550 ATP10BO94823 1461 aa26.15■■□□□ 1.78
MBD3-207ENST00000590550 ADCY10Q96PN6 1610 aa26.14■■□□□ 1.78
MBD3-207ENST00000590550 CROCC2H7BZ55 1655 aa26.14■■□□□ 1.78
MBD3-207ENST00000590550 BCORL1Q5H9F3 1711 aa26.14■■□□□ 1.77
MBD3-207ENST00000590550 CCDC136Q96JN2 1154 aa26.13■■□□□ 1.77
MBD3-207ENST00000590550 C9orf84Q5VXU9 1444 aa26.13■■□□□ 1.77
MBD3-207ENST00000590550 ZBED9Q6R2W3 1325 aa26.13■■□□□ 1.77
MBD3-207ENST00000590550 DHX29Q7Z478 1369 aaKnown RBP26.11■■□□□ 1.77
MBD3-207ENST00000590550 TSPY4P0CV99 314 aa26.11■■□□□ 1.77
MBD3-207ENST00000590550 TSPY10P0CW01 314 aa26.11■■□□□ 1.77
MBD3-207ENST00000590550 CDC42BPAQ5VT25 1732 aa26.11■■□□□ 1.77
MBD3-207ENST00000590550 CARD11Q9BXL7 1154 aa26.09■■□□□ 1.77
MBD3-207ENST00000590550 ABCC10Q5T3U5 1492 aa26.09■■□□□ 1.77
MBD3-207ENST00000590550 B4GALNT3Q6L9W6 998 aa26.07■■□□□ 1.76
MBD3-207ENST00000590550 POLR1AO95602 1720 aaPredicted RBP26.07■■□□□ 1.76
MBD3-207ENST00000590550 ABCA8O94911 1581 aa26.06■■□□□ 1.76
MBD3-207ENST00000590550 DCAF11Q8TEB1 546 aa26.06■■□□□ 1.76
MBD3-207ENST00000590550 KIF15Q9NS87 1388 aa26.05■■□□□ 1.76
MBD3-207ENST00000590550 PPP4R2Q9NY27 417 aa26.03■■□□□ 1.76
MBD3-207ENST00000590550 ST20-MTHFSA0A0A6YYL1 179 aa26.02■■□□□ 1.76
MBD3-207ENST00000590550 KDM5CP41229 1560 aa26.02■■□□□ 1.76
MBD3-207ENST00000590550 NOP58Q9Y2X3 529 aaKnown RBP26.01■■□□□ 1.76
MBD3-207ENST00000590550 PAK3O75914 559 aaPredicted RBP26.01■■□□□ 1.75
MBD3-207ENST00000590550 RTN4Q9NQC3 1192 aaKnown RBP26■■□□□ 1.75
MBD3-207ENST00000590550 PTPRGP23470 1445 aa25.97■■□□□ 1.75
MBD3-207ENST00000590550 SHANK2Q9UPX8 1470 aa25.96■■□□□ 1.75
MBD3-207ENST00000590550 RGL3Q3MIN7 710 aa25.95■■□□□ 1.75
MBD3-207ENST00000590550 IL27Q8NEV9 243 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms