RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 SCAPERQ9BY12 1400 aa18.18■□□□□ 0.5
DDX39A-210ENST00000589675 POGZQ7Z3K3 1410 aa18.17■□□□□ 0.5
DDX39A-210ENST00000589675 PTPRMP28827 1452 aa18.17■□□□□ 0.5
DDX39A-210ENST00000589675 PCF11O94913 1555 aaKnown RBP18.17■□□□□ 0.5
DDX39A-210ENST00000589675 ZFYVE16Q7Z3T8 1539 aa18.16■□□□□ 0.5
DDX39A-210ENST00000589675 ARID4BQ4LE39 1312 aaPredicted RBP18.16■□□□□ 0.5
DDX39A-210ENST00000589675 FYCO1Q9BQS8 1478 aa18.14■□□□□ 0.5
DDX39A-210ENST00000589675 YEATS2Q9ULM3 1422 aa18.14■□□□□ 0.49
DDX39A-210ENST00000589675 MADDQ8WXG6 1647 aa18.13■□□□□ 0.49
DDX39A-210ENST00000589675 CDC42BPBQ9Y5S2 1711 aa18.12■□□□□ 0.49
DDX39A-210ENST00000589675 ARHGAP5Q13017 1502 aa18.12■□□□□ 0.49
DDX39A-210ENST00000589675 ZNF518AQ6AHZ1 1483 aa18.1■□□□□ 0.49
DDX39A-210ENST00000589675 SIGLEC1Q9BZZ2 1709 aa18.09■□□□□ 0.49
DDX39A-210ENST00000589675 PREX2Q70Z35 1606 aa18.09■□□□□ 0.49
DDX39A-210ENST00000589675 KDM5CP41229 1560 aa18.08■□□□□ 0.49
DDX39A-210ENST00000589675 ATP10AO60312 1499 aa18.08■□□□□ 0.49
DDX39A-210ENST00000589675 RIMS1Q86UR5 1692 aaKnown RBP18.06■□□□□ 0.48
DDX39A-210ENST00000589675 CDC42BPAQ5VT25 1732 aa18.05■□□□□ 0.48
DDX39A-210ENST00000589675 C9orf84Q5VXU9 1444 aa18.05■□□□□ 0.48
DDX39A-210ENST00000589675 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
DDX39A-210ENST00000589675 MLH3Q9UHC1 1453 aa18.02■□□□□ 0.48
DDX39A-210ENST00000589675 ABCC1P33527 1531 aa18.02■□□□□ 0.47
DDX39A-210ENST00000589675 FER1L4A9Z1Z3 1794 aa18.02■□□□□ 0.47
DDX39A-210ENST00000589675 REREQ9P2R6 1566 aa18.01■□□□□ 0.47
DDX39A-210ENST00000589675 ITSN2Q9NZM3 1697 aa18.01■□□□□ 0.47
DDX39A-210ENST00000589675 ARHGEF12Q9NZN5 1544 aa18.01■□□□□ 0.47
DDX39A-210ENST00000589675 LMTK3Q96Q04 1460 aa17.98■□□□□ 0.47
DDX39A-210ENST00000589675 DIP2CQ9Y2E4 1556 aa17.98■□□□□ 0.47
DDX39A-210ENST00000589675 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
DDX39A-210ENST00000589675 TRAPPC8Q9Y2L5 1435 aa17.98■□□□□ 0.47
DDX39A-210ENST00000589675 MLECQ14165 292 aa17.96■□□□□ 0.47
DDX39A-210ENST00000589675 ABCA6Q8N139 1617 aa17.95■□□□□ 0.46
DDX39A-210ENST00000589675 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
DDX39A-210ENST00000589675 KIDINS220Q9ULH0 1771 aa17.94■□□□□ 0.46
DDX39A-210ENST00000589675 AGLP35573 1532 aa17.94■□□□□ 0.46
DDX39A-210ENST00000589675 SAMD9LQ8IVG5 1584 aa17.94■□□□□ 0.46
DDX39A-210ENST00000589675 MYT1LQ9UL68 1186 aa17.93■□□□□ 0.46
DDX39A-210ENST00000589675 MTUS2Q5JR59 1369 aa17.92■□□□□ 0.46
DDX39A-210ENST00000589675 KIAA1107Q9UPP5 1409 aa17.92■□□□□ 0.46
DDX39A-210ENST00000589675 ILDR1Q86SU0 546 aaPredicted RBP17.92■□□□□ 0.46
DDX39A-210ENST00000589675 SETD1BQ9UPS6 1966 aaKnown RBP17.91■□□□□ 0.46
DDX39A-210ENST00000589675 PLEKHH2Q8IVE3 1493 aa17.91■□□□□ 0.46
DDX39A-210ENST00000589675 CCNB3Q8WWL7 1395 aa17.91■□□□□ 0.46
DDX39A-210ENST00000589675 CFDP1Q9UEE9 299 aaPredicted RBP17.9■□□□□ 0.46
DDX39A-210ENST00000589675 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
DDX39A-210ENST00000589675 SYCP2Q9BX26 1530 aa17.89■□□□□ 0.45
DDX39A-210ENST00000589675 ZNF777Q9ULD5 760 aaPredicted RBP17.89■□□□□ 0.45
DDX39A-210ENST00000589675 HNRNPMP52272 730 aaKnown RBP eCLIP17.87■□□□□ 0.454e-15■■■■■ 28.5
DDX39A-210ENST00000589675 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
DDX39A-210ENST00000589675 SPAG9O60271 1321 aaKnown RBP17.86■□□□□ 0.45
DDX39A-210ENST00000589675 TIAM1Q13009 1591 aa17.85■□□□□ 0.45
DDX39A-210ENST00000589675 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
DDX39A-210ENST00000589675 ATP7AQ04656 1500 aa17.83■□□□□ 0.45
DDX39A-210ENST00000589675 INO80Q9ULG1 1556 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-210ENST00000589675 CEBPAP49715 358 aaPredicted RBP17.82■□□□□ 0.44
DDX39A-210ENST00000589675 HSPA2P54652 639 aa17.82■□□□□ 0.44
DDX39A-210ENST00000589675 C3P01024 1663 aa17.82■□□□□ 0.44
DDX39A-210ENST00000589675 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
DDX39A-210ENST00000589675 ESF1Q9H501 851 aaKnown RBP17.8■□□□□ 0.44
DDX39A-210ENST00000589675 SUPT6HQ7KZ85 1726 aaKnown RBP17.8■□□□□ 0.44
DDX39A-210ENST00000589675 MBD5Q9P267 1494 aa17.8■□□□□ 0.44
DDX39A-210ENST00000589675 PLXNC1O60486 1568 aa17.79■□□□□ 0.44
DDX39A-210ENST00000589675 MROH2AA6NES4 1674 aa17.78■□□□□ 0.44
DDX39A-210ENST00000589675 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
DDX39A-210ENST00000589675 VPS8Q8N3P4 1428 aa17.78■□□□□ 0.44
DDX39A-210ENST00000589675 ADGBQ8N7X0 1667 aa17.77■□□□□ 0.44
DDX39A-210ENST00000589675 ZNF644Q9H582 1327 aaPredicted RBP17.77■□□□□ 0.44
DDX39A-210ENST00000589675 A2MP01023 1474 aa17.77■□□□□ 0.44
DDX39A-210ENST00000589675 RTEL1-TNFRSF6BF6WH68 1400 aa17.77■□□□□ 0.44
DDX39A-210ENST00000589675 UHRF1BP1Q6BDS2 1440 aa17.77■□□□□ 0.44
DDX39A-210ENST00000589675 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
DDX39A-210ENST00000589675 FBXO41Q8TF61 875 aa17.76■□□□□ 0.43
DDX39A-210ENST00000589675 RSPH4AQ5TD94 716 aa17.75■□□□□ 0.43
DDX39A-210ENST00000589675 MAP3K1Q13233 1512 aa17.74■□□□□ 0.43
DDX39A-210ENST00000589675 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
DDX39A-210ENST00000589675 STRCQ7RTU9 1775 aa17.73■□□□□ 0.43
DDX39A-210ENST00000589675 NPATQ14207 1427 aa17.72■□□□□ 0.43
DDX39A-210ENST00000589675 LRRC9Q6ZRR7 1453 aa17.72■□□□□ 0.43
DDX39A-210ENST00000589675 ZMYM3Q14202 1370 aa17.71■□□□□ 0.43
DDX39A-210ENST00000589675 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
DDX39A-210ENST00000589675 CAMSAP2Q08AD1 1489 aa17.7■□□□□ 0.42
DDX39A-210ENST00000589675 CCDC141Q6ZP82 1450 aa17.7■□□□□ 0.42
DDX39A-210ENST00000589675 DHX29Q7Z478 1369 aaKnown RBP17.69■□□□□ 0.42
DDX39A-210ENST00000589675 CLTCQ00610 1675 aaKnown RBP17.69■□□□□ 0.42
DDX39A-210ENST00000589675 ARHGEF5Q12774 1597 aa17.69■□□□□ 0.42
DDX39A-210ENST00000589675 GGT6Q6P531 493 aa17.66■□□□□ 0.42
DDX39A-210ENST00000589675 PTPRTO14522 1441 aa17.64■□□□□ 0.41
DDX39A-210ENST00000589675 FAM135AQ9P2D6 1515 aa17.63■□□□□ 0.41
DDX39A-210ENST00000589675 PTPRKQ15262 1439 aa17.63■□□□□ 0.41
DDX39A-210ENST00000589675 TSPY4P0CV99 314 aa17.62■□□□□ 0.41
DDX39A-210ENST00000589675 TSPY10P0CW01 314 aa17.62■□□□□ 0.41
DDX39A-210ENST00000589675 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
DDX39A-210ENST00000589675 CERKQ8TCT0 537 aa17.62■□□□□ 0.41
DDX39A-210ENST00000589675 MIA2Q96PC5 1412 aa17.62■□□□□ 0.41
DDX39A-210ENST00000589675 NCOA1Q15788 1441 aa17.61■□□□□ 0.41
DDX39A-210ENST00000589675 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-210ENST00000589675 MYOM3Q5VTT5 1437 aa17.6■□□□□ 0.41
DDX39A-210ENST00000589675 MAST1Q9Y2H9 1570 aa17.6■□□□□ 0.41
DDX39A-210ENST00000589675 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.41
DDX39A-210ENST00000589675 KIF3BO15066 747 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms