RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ITSN2Q9NZM3 1697 aa15.08■□□□□ 0
VPS25-203ENST00000589520 DAPK1P53355 1430 aa15.07■□□□□ 0
VPS25-203ENST00000589520 RSPH4AQ5TD94 716 aa15.06■□□□□ 0
VPS25-203ENST00000589520 DIEXFQ68CQ4 756 aaKnown RBP15.06■□□□□ 0
VPS25-203ENST00000589520 KIF14Q15058 1648 aa15.06■□□□□ 0
VPS25-203ENST00000589520 ABCC5O15440 1437 aa15.05■□□□□ -0
VPS25-203ENST00000589520 UHRF1BP1LA0JNW5 1464 aa15.05■□□□□ -0
VPS25-203ENST00000589520 DNMT1P26358 1616 aaKnown RBP15.04■□□□□ -0
VPS25-203ENST00000589520 ABCC10Q5T3U5 1492 aa15.04■□□□□ -0
VPS25-203ENST00000589520 ABCC2Q92887 1545 aa15.02■□□□□ -0
VPS25-203ENST00000589520 RRP7BPQ9NSQ0 103 aa15.02■□□□□ -0
VPS25-203ENST00000589520 GCC2Q8IWJ2 1684 aa15.01□□□□□ -0.01
VPS25-203ENST00000589520 CHIC2Q9UKJ5 165 aa15.01□□□□□ -0.01
VPS25-203ENST00000589520 CAMSAP2Q08AD1 1489 aa15.01□□□□□ -0.01
VPS25-203ENST00000589520 ZNF644Q9H582 1327 aaPredicted RBP14.98□□□□□ -0.01
VPS25-203ENST00000589520 ADGRL2O95490 1459 aa14.98□□□□□ -0.01
VPS25-203ENST00000589520 KDM4FA0A1W2PPD8 638 aa14.98□□□□□ -0.01
VPS25-203ENST00000589520 ANKRD30AQ9BXX3 1397 aa14.98□□□□□ -0.01
VPS25-203ENST00000589520 KIF13AQ9H1H9 1805 aa14.97□□□□□ -0.01
VPS25-203ENST00000589520 SHANK2Q9UPX8 1470 aa14.97□□□□□ -0.01
VPS25-203ENST00000589520 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
VPS25-203ENST00000589520 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
VPS25-203ENST00000589520 NCOA1Q15788 1441 aa14.96□□□□□ -0.01
VPS25-203ENST00000589520 TRIM52Q96A61 297 aa14.96□□□□□ -0.01
VPS25-203ENST00000589520 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
VPS25-203ENST00000589520 KDM5BQ9UGL1 1544 aa14.96□□□□□ -0.02
VPS25-203ENST00000589520 PPP1R15AO75807 674 aaPredicted RBP14.95□□□□□ -0.02
VPS25-203ENST00000589520 NEUROD1Q13562 356 aa14.95□□□□□ -0.02
VPS25-203ENST00000589520 SIN3AQ96ST3 1273 aa14.95□□□□□ -0.02
VPS25-203ENST00000589520 MPHOSPH9Q99550 1183 aa14.94□□□□□ -0.02
VPS25-203ENST00000589520 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
VPS25-203ENST00000589520 PLEKHH2Q8IVE3 1493 aa14.94□□□□□ -0.02
VPS25-203ENST00000589520 ARHGEF5Q12774 1597 aa14.92□□□□□ -0.02
VPS25-203ENST00000589520 ERCC6L2Q5T890 1561 aa14.92□□□□□ -0.02
VPS25-203ENST00000589520 CDC42BPAQ5VT25 1732 aa14.92□□□□□ -0.02
VPS25-203ENST00000589520 KIAA1107Q9UPP5 1409 aa14.92□□□□□ -0.02
VPS25-203ENST00000589520 ADGBQ8N7X0 1667 aa14.89□□□□□ -0.03
VPS25-203ENST00000589520 C9orf84Q5VXU9 1444 aa14.88□□□□□ -0.03
VPS25-203ENST00000589520 MBD5Q9P267 1494 aa14.88□□□□□ -0.03
VPS25-203ENST00000589520 PREX2Q70Z35 1606 aa14.88□□□□□ -0.03
VPS25-203ENST00000589520 HECW2Q9P2P5 1572 aa14.87□□□□□ -0.03
VPS25-203ENST00000589520 PLCH2O75038 1416 aa14.87□□□□□ -0.03
VPS25-203ENST00000589520 EFCAB2Q5VUJ9 269 aa14.87□□□□□ -0.03
VPS25-203ENST00000589520 CCDC141Q6ZP82 1450 aa14.87□□□□□ -0.03
VPS25-203ENST00000589520 CROCC2H7BZ55 1655 aa14.87□□□□□ -0.03
VPS25-203ENST00000589520 ANKRD50Q9ULJ7 1429 aa14.86□□□□□ -0.03
VPS25-203ENST00000589520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS25-203ENST00000589520 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
VPS25-203ENST00000589520 ARAP3Q8WWN8 1544 aa14.85□□□□□ -0.03
VPS25-203ENST00000589520 HNRNPMP52272 730 aaKnown RBP eCLIP14.84□□□□□ -0.03
VPS25-203ENST00000589520 ZCCHC11Q5TAX3 1644 aaKnown RBP14.84□□□□□ -0.03
VPS25-203ENST00000589520 LMTK3Q96Q04 1460 aa14.83□□□□□ -0.03
VPS25-203ENST00000589520 ARHGAP5Q13017 1502 aa14.83□□□□□ -0.04
VPS25-203ENST00000589520 ANKRD30BQ9BXX2 1392 aa14.83□□□□□ -0.04
VPS25-203ENST00000589520 KDM6BO15054 1643 aa14.82□□□□□ -0.04
VPS25-203ENST00000589520 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
VPS25-203ENST00000589520 DENND4BO75064 1496 aaPredicted RBP14.82□□□□□ -0.04
VPS25-203ENST00000589520 MAST1Q9Y2H9 1570 aa14.81□□□□□ -0.04
VPS25-203ENST00000589520 CDC42BPBQ9Y5S2 1711 aa14.81□□□□□ -0.04
VPS25-203ENST00000589520 NPM1P06748 294 aaKnown RBP eCLIP14.81□□□□□ -0.04
VPS25-203ENST00000589520 SAMD9LQ8IVG5 1584 aa14.81□□□□□ -0.04
VPS25-203ENST00000589520 MYO5CQ9NQX4 1742 aa14.79□□□□□ -0.04
VPS25-203ENST00000589520 KIF15Q9NS87 1388 aa14.79□□□□□ -0.04
VPS25-203ENST00000589520 TTC37Q6PGP7 1564 aa14.78□□□□□ -0.04
VPS25-203ENST00000589520 WDR7Q9Y4E6 1490 aa14.78□□□□□ -0.04
VPS25-203ENST00000589520 FBXO41Q8TF61 875 aa14.78□□□□□ -0.04
VPS25-203ENST00000589520 KDM5DQ9BY66 1539 aa14.77□□□□□ -0.04
VPS25-203ENST00000589520 PZPP20742 1482 aa14.77□□□□□ -0.04
VPS25-203ENST00000589520 RPRD2Q5VT52 1461 aaKnown RBP14.77□□□□□ -0.04
VPS25-203ENST00000589520 NUP155O75694 1391 aa14.76□□□□□ -0.05
VPS25-203ENST00000589520 RTEL1-TNFRSF6BF6WH68 1400 aa14.75□□□□□ -0.05
VPS25-203ENST00000589520 SYCP2Q9BX26 1530 aa14.73□□□□□ -0.05
VPS25-203ENST00000589520 CENPBP07199 599 aaPredicted RBP14.73□□□□□ -0.05
VPS25-203ENST00000589520 PKD2Q13563 968 aa14.73□□□□□ -0.05
VPS25-203ENST00000589520 L3MBTL2Q969R5 705 aa14.72□□□□□ -0.05
VPS25-203ENST00000589520 PLXNC1O60486 1568 aa14.72□□□□□ -0.05
VPS25-203ENST00000589520 DUOX2Q9NRD8 1548 aa14.71□□□□□ -0.05
VPS25-203ENST00000589520 MIER1Q8N108 512 aa14.71□□□□□ -0.05
VPS25-203ENST00000589520 ERBINQ96RT1 1412 aa14.71□□□□□ -0.05
VPS25-203ENST00000589520 ASXL2Q76L83 1435 aa14.7□□□□□ -0.06
VPS25-203ENST00000589520 ABCC1P33527 1531 aa14.7□□□□□ -0.06
VPS25-203ENST00000589520 ABCA9Q8IUA7 1624 aa14.7□□□□□ -0.06
VPS25-203ENST00000589520 ILDR2Q71H61 639 aa14.69□□□□□ -0.06
VPS25-203ENST00000589520 FOXD1Q16676 465 aa14.68□□□□□ -0.06
VPS25-203ENST00000589520 ARHGEF12Q9NZN5 1544 aa14.67□□□□□ -0.06
VPS25-203ENST00000589520 SOCS7O14512 581 aa14.67□□□□□ -0.06
VPS25-203ENST00000589520 EIF4G2P78344 907 aaKnown RBP eCLIP14.67□□□□□ -0.06
VPS25-203ENST00000589520 ADGRL1O94910 1474 aa14.67□□□□□ -0.06
VPS25-203ENST00000589520 TSPOAP1O95153 1857 aa14.67□□□□□ -0.06
VPS25-203ENST00000589520 SPAG9O60271 1321 aaKnown RBP14.66□□□□□ -0.06
VPS25-203ENST00000589520 FANCAO15360 1455 aa14.65□□□□□ -0.06
VPS25-203ENST00000589520 TEX14Q8IWB6 1497 aa14.64□□□□□ -0.07
VPS25-203ENST00000589520 TRAPPC8Q9Y2L5 1435 aa14.64□□□□□ -0.07
VPS25-203ENST00000589520 UNC13BO14795 1591 aa14.64□□□□□ -0.07
VPS25-203ENST00000589520 FAM135AQ9P2D6 1515 aa14.63□□□□□ -0.07
VPS25-203ENST00000589520 MAGI2Q86UL8 1455 aa14.61□□□□□ -0.07
VPS25-203ENST00000589520 UHRF1BP1Q6BDS2 1440 aa14.6□□□□□ -0.07
VPS25-203ENST00000589520 SCAPERQ9BY12 1400 aa14.6□□□□□ -0.07
VPS25-203ENST00000589520 ATP10AO60312 1499 aa14.59□□□□□ -0.07
VPS25-203ENST00000589520 AFAP1Q8N556 730 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms