RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ASXL2Q76L83 1435 aa17.07■□□□□ 0.32
SMAD4-205ENST00000588745 SETD5Q9C0A6 1442 aa17.07■□□□□ 0.32
SMAD4-205ENST00000588745 CCER1Q8TC90 406 aaPredicted RBP17.06■□□□□ 0.32
SMAD4-205ENST00000588745 HFM1A2PYH4 1435 aa17.06■□□□□ 0.32
SMAD4-205ENST00000588745 AKNAQ7Z591 1439 aa17.06■□□□□ 0.32
SMAD4-205ENST00000588745 GCC2Q8IWJ2 1684 aa17.05■□□□□ 0.32
SMAD4-205ENST00000588745 ZNF644Q9H582 1327 aaPredicted RBP17.05■□□□□ 0.32
SMAD4-205ENST00000588745 RAB3GAP2Q9H2M9 1393 aa17.05■□□□□ 0.32
SMAD4-205ENST00000588745 SAMD9LQ8IVG5 1584 aa17.05■□□□□ 0.32
SMAD4-205ENST00000588745 ABCC5O15440 1437 aa17.04■□□□□ 0.32
SMAD4-205ENST00000588745 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
SMAD4-205ENST00000588745 ABCA9Q8IUA7 1624 aa17.04■□□□□ 0.32
SMAD4-205ENST00000588745 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.32
SMAD4-205ENST00000588745 ZEB1P37275 1124 aaPredicted RBP17.02■□□□□ 0.32
SMAD4-205ENST00000588745 ARHGEF5Q12774 1597 aa17.02■□□□□ 0.32
SMAD4-205ENST00000588745 ADGBQ8N7X0 1667 aa17.02■□□□□ 0.32
SMAD4-205ENST00000588745 ARAP3Q8WWN8 1544 aa17.02■□□□□ 0.32
SMAD4-205ENST00000588745 KCNH8Q96L42 1107 aa17.02■□□□□ 0.31
SMAD4-205ENST00000588745 PLCH2O75038 1416 aa17.01■□□□□ 0.31
SMAD4-205ENST00000588745 NAIPQ13075 1403 aa17.01■□□□□ 0.31
SMAD4-205ENST00000588745 ZNF777Q9ULD5 760 aaPredicted RBP17.01■□□□□ 0.31
SMAD4-205ENST00000588745 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
SMAD4-205ENST00000588745 MAPKBP1O60336 1514 aa16.99■□□□□ 0.31
SMAD4-205ENST00000588745 ROCK1Q13464 1354 aa16.99■□□□□ 0.31
SMAD4-205ENST00000588745 DHX57Q6P158 1386 aaKnown RBP16.98■□□□□ 0.31
SMAD4-205ENST00000588745 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
SMAD4-205ENST00000588745 SYCP2Q9BX26 1530 aa16.97■□□□□ 0.31
SMAD4-205ENST00000588745 ADGRL2O95490 1459 aa16.97■□□□□ 0.31
SMAD4-205ENST00000588745 MBD5Q9P267 1494 aa16.97■□□□□ 0.31
SMAD4-205ENST00000588745 CYB5RLQ6IPT4 315 aa16.96■□□□□ 0.31
SMAD4-205ENST00000588745 CCDC141Q6ZP82 1450 aa16.95■□□□□ 0.3
SMAD4-205ENST00000588745 ABCC1P33527 1531 aa16.95■□□□□ 0.3
SMAD4-205ENST00000588745 KIAA1107Q9UPP5 1409 aa16.94■□□□□ 0.3
SMAD4-205ENST00000588745 CHIC2Q9UKJ5 165 aa16.94■□□□□ 0.3
SMAD4-205ENST00000588745 C9orf84Q5VXU9 1444 aa16.93■□□□□ 0.3
SMAD4-205ENST00000588745 MAST1Q9Y2H9 1570 aa16.92■□□□□ 0.3
SMAD4-205ENST00000588745 EFCAB2Q5VUJ9 269 aa16.91■□□□□ 0.3
SMAD4-205ENST00000588745 RRP7BPQ9NSQ0 103 aa16.91■□□□□ 0.3
SMAD4-205ENST00000588745 KDM6BO15054 1643 aa16.9■□□□□ 0.3
SMAD4-205ENST00000588745 NCOA1Q15788 1441 aa16.9■□□□□ 0.3
SMAD4-205ENST00000588745 CLSPNQ9HAW4 1339 aa16.9■□□□□ 0.3
SMAD4-205ENST00000588745 ARHGEF12Q9NZN5 1544 aa16.89■□□□□ 0.29
SMAD4-205ENST00000588745 FANCAO15360 1455 aa16.89■□□□□ 0.29
SMAD4-205ENST00000588745 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.29
SMAD4-205ENST00000588745 RSPH4AQ5TD94 716 aa16.89■□□□□ 0.29
SMAD4-205ENST00000588745 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
SMAD4-205ENST00000588745 HNRNPMP52272 730 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMAD4-205ENST00000588745 GLI2P10070 1586 aa16.87■□□□□ 0.29
SMAD4-205ENST00000588745 PLXNC1O60486 1568 aa16.85■□□□□ 0.29
SMAD4-205ENST00000588745 TSPY4P0CV99 314 aa16.85■□□□□ 0.29
SMAD4-205ENST00000588745 TSPY10P0CW01 314 aa16.85■□□□□ 0.29
SMAD4-205ENST00000588745 MAP3K4Q9Y6R4 1608 aa16.84■□□□□ 0.29
SMAD4-205ENST00000588745 CD109Q6YHK3 1445 aa16.84■□□□□ 0.29
SMAD4-205ENST00000588745 DIP2BQ9P265 1576 aa16.84■□□□□ 0.29
SMAD4-205ENST00000588745 ADGRL1O94910 1474 aa16.83■□□□□ 0.29
SMAD4-205ENST00000588745 ACIN1Q9UKV3 1341 aaKnown RBP16.82■□□□□ 0.28
SMAD4-205ENST00000588745 TRAPPC8Q9Y2L5 1435 aa16.82■□□□□ 0.28
SMAD4-205ENST00000588745 KIF15Q9NS87 1388 aa16.8■□□□□ 0.28
SMAD4-205ENST00000588745 ANKRD50Q9ULJ7 1429 aa16.8■□□□□ 0.28
SMAD4-205ENST00000588745 ZFYVE16Q7Z3T8 1539 aa16.8■□□□□ 0.28
SMAD4-205ENST00000588745 INO80Q9ULG1 1556 aaPredicted RBP16.78■□□□□ 0.28
SMAD4-205ENST00000588745 NEO1Q92859 1461 aa16.78■□□□□ 0.28
SMAD4-205ENST00000588745 SCAPERQ9BY12 1400 aa16.78■□□□□ 0.28
SMAD4-205ENST00000588745 RTEL1-TNFRSF6BF6WH68 1400 aa16.76■□□□□ 0.27
SMAD4-205ENST00000588745 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
SMAD4-205ENST00000588745 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
SMAD4-205ENST00000588745 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
SMAD4-205ENST00000588745 DENND4BO75064 1496 aaPredicted RBP16.74■□□□□ 0.27
SMAD4-205ENST00000588745 ZNF518AQ6AHZ1 1483 aa16.74■□□□□ 0.27
SMAD4-205ENST00000588745 KDM5CP41229 1560 aa16.73■□□□□ 0.27
SMAD4-205ENST00000588745 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
SMAD4-205ENST00000588745 POGZQ7Z3K3 1410 aa16.73■□□□□ 0.27
SMAD4-205ENST00000588745 SPAG9O60271 1321 aaKnown RBP16.72■□□□□ 0.27
SMAD4-205ENST00000588745 ERBINQ96RT1 1412 aa16.72■□□□□ 0.27
SMAD4-205ENST00000588745 UNC13BO14795 1591 aa16.72■□□□□ 0.27
SMAD4-205ENST00000588745 PPRC1Q5VV67 1664 aaKnown RBP16.71■□□□□ 0.27
SMAD4-205ENST00000588745 KIF13AQ9H1H9 1805 aa16.71■□□□□ 0.27
SMAD4-205ENST00000588745 PZPP20742 1482 aa16.71■□□□□ 0.27
SMAD4-205ENST00000588745 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
SMAD4-205ENST00000588745 FAM69CQ0P6D2 419 aa16.69■□□□□ 0.26
SMAD4-205ENST00000588745 HECW2Q9P2P5 1572 aa16.69■□□□□ 0.26
SMAD4-205ENST00000588745 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
SMAD4-205ENST00000588745 MPHOSPH9Q99550 1183 aa16.68■□□□□ 0.26
SMAD4-205ENST00000588745 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
SMAD4-205ENST00000588745 MAGI2Q86UL8 1455 aa16.66■□□□□ 0.26
SMAD4-205ENST00000588745 RICTORQ6R327 1708 aa16.66■□□□□ 0.26
SMAD4-205ENST00000588745 TSPOAP1O95153 1857 aa16.65■□□□□ 0.26
SMAD4-205ENST00000588745 MLH3Q9UHC1 1453 aa16.65■□□□□ 0.26
SMAD4-205ENST00000588745 EIF2AK4Q9P2K8 1649 aaKnown RBP16.65■□□□□ 0.26
SMAD4-205ENST00000588745 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
SMAD4-205ENST00000588745 NUP155O75694 1391 aa16.63■□□□□ 0.25
SMAD4-205ENST00000588745 FRMPD1Q5SYB0 1578 aa16.63■□□□□ 0.25
SMAD4-205ENST00000588745 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
SMAD4-205ENST00000588745 DEPDC5O75140 1603 aa16.62■□□□□ 0.25
SMAD4-205ENST00000588745 FAM135AQ9P2D6 1515 aa16.62■□□□□ 0.25
SMAD4-205ENST00000588745 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
SMAD4-205ENST00000588745 ABCA6Q8N139 1617 aa16.61■□□□□ 0.25
SMAD4-205ENST00000588745 ZMYM4Q5VZL5 1548 aa16.6■□□□□ 0.25
SMAD4-205ENST00000588745 DHX29Q7Z478 1369 aaKnown RBP16.59■□□□□ 0.25
SMAD4-205ENST00000588745 ANKRD30BQ9BXX2 1392 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms