RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 PLCD3Q8N3E9 789 aa8.5□□□□□ -1.05
AP000547.3-204ENST00000588548 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
AP000547.3-204ENST00000588548 RNF216Q9NWF9 866 aaPredicted RBP8.49□□□□□ -1.05
AP000547.3-204ENST00000588548 ATAD2BQ9ULI0 1458 aa8.49□□□□□ -1.05
AP000547.3-204ENST00000588548 VGFO15240 615 aaPredicted RBP8.49□□□□□ -1.05
AP000547.3-204ENST00000588548 DMTNQ08495 405 aa8.48□□□□□ -1.05
AP000547.3-204ENST00000588548 CNKSR2Q8WXI2 1034 aa8.48□□□□□ -1.05
AP000547.3-204ENST00000588548 PEG3Q9GZU2 1588 aa8.48□□□□□ -1.05
AP000547.3-204ENST00000588548 PPP4R3BQ5MIZ7 849 aa8.48□□□□□ -1.05
AP000547.3-204ENST00000588548 TCERG1O14776 1098 aaKnown RBP8.47□□□□□ -1.05
AP000547.3-204ENST00000588548 FRAT2O75474 233 aaPredicted RBP8.47□□□□□ -1.05
AP000547.3-204ENST00000588548 PDE4AP27815 886 aa8.47□□□□□ -1.05
AP000547.3-204ENST00000588548 BACH2Q9BYV9 841 aa8.47□□□□□ -1.05
AP000547.3-204ENST00000588548 BAZ1BQ9UIG0 1483 aaKnown RBP8.47□□□□□ -1.05
AP000547.3-204ENST00000588548 VGLL3A8MV65 326 aa8.46□□□□□ -1.06
AP000547.3-204ENST00000588548 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
AP000547.3-204ENST00000588548 SIN3AQ96ST3 1273 aa8.45□□□□□ -1.06
AP000547.3-204ENST00000588548 MS4A1P11836 297 aa8.44□□□□□ -1.06
AP000547.3-204ENST00000588548 SYNJ1O43426 1573 aa8.43□□□□□ -1.06
AP000547.3-204ENST00000588548 RNF123Q5XPI4 1314 aa8.43□□□□□ -1.06
AP000547.3-204ENST00000588548 TNIKQ9UKE5 1360 aa8.42□□□□□ -1.06
AP000547.3-204ENST00000588548 KIF20AO95235 890 aa8.42□□□□□ -1.06
AP000547.3-204ENST00000588548 RIPK4P57078 832 aa8.42□□□□□ -1.06
AP000547.3-204ENST00000588548 POGKQ9P215 609 aa8.42□□□□□ -1.06
AP000547.3-204ENST00000588548 ESPNB1AK53 854 aa8.42□□□□□ -1.06
AP000547.3-204ENST00000588548 XRCC6P12956 609 aaKnown RBP eCLIP8.42□□□□□ -1.06
AP000547.3-204ENST00000588548 HSP90B1P14625 803 aaKnown RBP8.42□□□□□ -1.06
AP000547.3-204ENST00000588548 TERF1P54274 439 aa8.42□□□□□ -1.06
AP000547.3-204ENST00000588548 ANP32BQ92688 251 aaKnown RBP8.42□□□□□ -1.06
AP000547.3-204ENST00000588548 UBTFP17480 764 aaKnown RBP8.41□□□□□ -1.06
AP000547.3-204ENST00000588548 ZSCAN20P17040 1043 aaPredicted RBP8.41□□□□□ -1.06
AP000547.3-204ENST00000588548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.41□□□□□ -1.06
AP000547.3-204ENST00000588548 KIAA1211Q6ZU35 1233 aa8.4□□□□□ -1.06
AP000547.3-204ENST00000588548 MTERF4Q7Z6M4 381 aaKnown RBP8.4□□□□□ -1.06
AP000547.3-204ENST00000588548 FSD2A1L4K1 749 aa8.4□□□□□ -1.07
AP000547.3-204ENST00000588548 TNNT2P45379 298 aaPredicted RBP8.4□□□□□ -1.07
AP000547.3-204ENST00000588548 IRX3P78415 501 aaPredicted RBP8.4□□□□□ -1.07
AP000547.3-204ENST00000588548 PRDM10Q9NQV6 1147 aa8.4□□□□□ -1.07
AP000547.3-204ENST00000588548 KCNG1Q9UIX4 513 aa8.4□□□□□ -1.07
AP000547.3-204ENST00000588548 WDR97A6NE52 1622 aa8.4□□□□□ -1.07
AP000547.3-204ENST00000588548 ZBED9Q6R2W3 1325 aa8.39□□□□□ -1.07
AP000547.3-204ENST00000588548 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
AP000547.3-204ENST00000588548 ERBB4Q15303 1308 aa8.39□□□□□ -1.07
AP000547.3-204ENST00000588548 MMP14P50281 582 aa8.38□□□□□ -1.07
AP000547.3-204ENST00000588548 CNPY4Q8N129 248 aa8.38□□□□□ -1.07
AP000547.3-204ENST00000588548 GTPBP4Q9BZE4 634 aaKnown RBP8.38□□□□□ -1.07
AP000547.3-204ENST00000588548 SLC4A3P48751 1232 aa8.38□□□□□ -1.07
AP000547.3-204ENST00000588548 TAF3Q5VWG9 929 aa8.38□□□□□ -1.07
AP000547.3-204ENST00000588548 LETM1O95202 739 aaPredicted RBP8.37□□□□□ -1.07
AP000547.3-204ENST00000588548 SMG6Q86US8 1419 aaKnown RBP8.36□□□□□ -1.07
AP000547.3-204ENST00000588548 GOLGA6L3A6NEY3 463 aa8.36□□□□□ -1.07
AP000547.3-204ENST00000588548 PANK2Q9BZ23 570 aa8.36□□□□□ -1.07
AP000547.3-204ENST00000588548 FAM13BQ9NYF5 915 aa8.36□□□□□ -1.07
AP000547.3-204ENST00000588548 CUX2O14529 1486 aa8.35□□□□□ -1.07
AP000547.3-204ENST00000588548 AKNAQ7Z591 1439 aa8.35□□□□□ -1.07
AP000547.3-204ENST00000588548 CC2D2AQ9P2K1 1620 aa8.35□□□□□ -1.07
AP000547.3-204ENST00000588548 OFD1O75665 1012 aa8.34□□□□□ -1.07
AP000547.3-204ENST00000588548 GOLGA3Q08378 1498 aa8.34□□□□□ -1.07
AP000547.3-204ENST00000588548 CDK11BP21127 795 aaKnown RBP8.34□□□□□ -1.07
AP000547.3-204ENST00000588548 DNTTIP2Q5QJE6 756 aaKnown RBP8.34□□□□□ -1.07
AP000547.3-204ENST00000588548 CCDC94Q9BW85 323 aaPredicted RBP8.33□□□□□ -1.08
AP000547.3-204ENST00000588548 CLGNO14967 610 aa8.33□□□□□ -1.08
AP000547.3-204ENST00000588548 SLC20A2Q08357 652 aa8.33□□□□□ -1.08
AP000547.3-204ENST00000588548 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
AP000547.3-204ENST00000588548 MAPKBP1O60336 1514 aa8.33□□□□□ -1.08
AP000547.3-204ENST00000588548 MRE11P49959 708 aa8.32□□□□□ -1.08
AP000547.3-204ENST00000588548 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.32□□□□□ -1.08
AP000547.3-204ENST00000588548 SLC52A1Q9NWF4 448 aa8.32□□□□□ -1.08
AP000547.3-204ENST00000588548 RAPGEF2Q9Y4G8 1499 aa8.31□□□□□ -1.08
AP000547.3-204ENST00000588548 PSEN1P49768 467 aa8.31□□□□□ -1.08
AP000547.3-204ENST00000588548 MYH16Q9H6N6 1097 aa8.31□□□□□ -1.08
AP000547.3-204ENST00000588548 HDAC5Q9UQL6 1122 aa8.31□□□□□ -1.08
AP000547.3-204ENST00000588548 FBXO3Q9UK99 471 aa8.3□□□□□ -1.08
AP000547.3-204ENST00000588548 DYNC1I1O14576 645 aa8.29□□□□□ -1.08
AP000547.3-204ENST00000588548 CEP164Q9UPV0 1460 aa8.29□□□□□ -1.08
AP000547.3-204ENST00000588548 E9PSI1 815 aa8.29□□□□□ -1.08
AP000547.3-204ENST00000588548 NUDCQ9Y266 331 aa8.29□□□□□ -1.08
AP000547.3-204ENST00000588548 TOP2BQ02880 1626 aa8.28□□□□□ -1.08
AP000547.3-204ENST00000588548 IRX5P78411 483 aaPredicted RBP8.28□□□□□ -1.08
AP000547.3-204ENST00000588548 MAPK8IP2Q13387 824 aaPredicted RBP8.28□□□□□ -1.08
AP000547.3-204ENST00000588548 ZNF622Q969S3 477 aaKnown RBP eCLIP8.28□□□□□ -1.08
AP000547.3-204ENST00000588548 TRIM44Q96DX7 344 aaPredicted RBP8.28□□□□□ -1.08
AP000547.3-204ENST00000588548 FAM193AP78312 1265 aa8.27□□□□□ -1.09
AP000547.3-204ENST00000588548 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.09
AP000547.3-204ENST00000588548 DNAJC2Q99543 621 aaKnown RBP8.27□□□□□ -1.09
AP000547.3-204ENST00000588548 HIRIP3Q9BW71 556 aaPredicted RBP8.27□□□□□ -1.09
AP000547.3-204ENST00000588548 HMGXB3Q12766 1538 aa8.27□□□□□ -1.09
AP000547.3-204ENST00000588548 KIF21BO75037 1637 aa8.27□□□□□ -1.09
AP000547.3-204ENST00000588548 CLIP1P30622 1438 aa8.27□□□□□ -1.09
AP000547.3-204ENST00000588548 CUX1P39880 1505 aa8.27□□□□□ -1.09
AP000547.3-204ENST00000588548 AXDND1Q5T1B0 1012 aaPredicted RBP8.27□□□□□ -1.09
AP000547.3-204ENST00000588548 ISY1Q9ULR0 285 aaKnown RBP8.27□□□□□ -1.09
AP000547.3-204ENST00000588548 SOX12O15370 315 aa8.26□□□□□ -1.09
AP000547.3-204ENST00000588548 MYCNP04198 464 aaPredicted RBP8.26□□□□□ -1.09
AP000547.3-204ENST00000588548 CCDC184Q52MB2 194 aa8.26□□□□□ -1.09
AP000547.3-204ENST00000588548 PIAS4Q8N2W9 510 aaPredicted RBP8.26□□□□□ -1.09
AP000547.3-204ENST00000588548 PHLDB1Q86UU1 1377 aa8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 UQCRHLA0A096LP55 91 aa8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 UQCRHP07919 91 aa8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 TMC1Q8TDI8 760 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms