RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 POGZQ7Z3K3 1410 aa35.06■■■■□ 3.2
CIRBP-219ENST00000588411 ARID4BQ4LE39 1312 aaPredicted RBP35.06■■■■□ 3.2
CIRBP-219ENST00000588411 MAGI2Q86UL8 1455 aa35.04■■■■□ 3.2
CIRBP-219ENST00000588411 CEP162Q5TB80 1403 aa35.03■■■■□ 3.2
CIRBP-219ENST00000588411 ZFYVE16Q7Z3T8 1539 aa35■■■■□ 3.19
CIRBP-219ENST00000588411 ZNF518AQ6AHZ1 1483 aa34.93■■■■□ 3.18
CIRBP-219ENST00000588411 YEATS2Q9ULM3 1422 aa34.92■■■■□ 3.18
CIRBP-219ENST00000588411 PREX2Q70Z35 1606 aa34.91■■■■□ 3.18
CIRBP-219ENST00000588411 ADAMTSL3P82987 1691 aa34.9■■■■□ 3.18
CIRBP-219ENST00000588411 BCORL1Q5H9F3 1711 aa34.89■■■■□ 3.18
CIRBP-219ENST00000588411 MTUS2Q5JR59 1369 aa34.87■■■■□ 3.17
CIRBP-219ENST00000588411 CDC42BPBQ9Y5S2 1711 aa34.87■■■■□ 3.17
CIRBP-219ENST00000588411 AFAP1Q8N556 730 aa34.83■■■■□ 3.17
CIRBP-219ENST00000588411 PTPRMP28827 1452 aa34.83■■■■□ 3.17
CIRBP-219ENST00000588411 MYT1LQ9UL68 1186 aa34.82■■■■□ 3.16
CIRBP-219ENST00000588411 ATP10AO60312 1499 aa34.82■■■■□ 3.16
CIRBP-219ENST00000588411 KDM5CP41229 1560 aa34.81■■■■□ 3.16
CIRBP-219ENST00000588411 LOC105371045A0A1W2PR82 267 aa34.8■■■■□ 3.16
CIRBP-219ENST00000588411 ABCC1P33527 1531 aa34.8■■■■□ 3.16
CIRBP-219ENST00000588411 C9orf84Q5VXU9 1444 aa34.8■■■■□ 3.16
CIRBP-219ENST00000588411 CDC42BPAQ5VT25 1732 aa34.79■■■■□ 3.16
CIRBP-219ENST00000588411 MADDQ8WXG6 1647 aa34.78■■■■□ 3.16
CIRBP-219ENST00000588411 CCNB3Q8WWL7 1395 aa34.77■■■■□ 3.16
CIRBP-219ENST00000588411 GPATCH8Q9UKJ3 1502 aaKnown RBP34.77■■■■□ 3.16
CIRBP-219ENST00000588411 HECW2Q9P2P5 1572 aa34.76■■■■□ 3.16
CIRBP-219ENST00000588411 ZNF777Q9ULD5 760 aaPredicted RBP34.75■■■■□ 3.15
CIRBP-219ENST00000588411 EHBP1L1Q8N3D4 1523 aa34.73■■■■□ 3.15
CIRBP-219ENST00000588411 CFDP1Q9UEE9 299 aaPredicted RBP34.72■■■■□ 3.15
CIRBP-219ENST00000588411 TRAPPC8Q9Y2L5 1435 aa34.72■■■■□ 3.15
CIRBP-219ENST00000588411 MLH3Q9UHC1 1453 aa34.71■■■■□ 3.15
CIRBP-219ENST00000588411 ARHGEF12Q9NZN5 1544 aa34.71■■■■□ 3.15
CIRBP-219ENST00000588411 ITSN2Q9NZM3 1697 aa34.7■■■■□ 3.15
CIRBP-219ENST00000588411 MLECQ14165 292 aa34.7■■■■□ 3.15
CIRBP-219ENST00000588411 PLEKHH2Q8IVE3 1493 aa34.67■■■■□ 3.14
CIRBP-219ENST00000588411 SIGLEC1Q9BZZ2 1709 aa34.67■■■■□ 3.14
CIRBP-219ENST00000588411 RIMS1Q86UR5 1692 aaKnown RBP34.66■■■■□ 3.14
CIRBP-219ENST00000588411 VPS8Q8N3P4 1428 aa34.65■■■■□ 3.14
CIRBP-219ENST00000588411 SAMD9LQ8IVG5 1584 aa34.65■■■■□ 3.14
CIRBP-219ENST00000588411 KIAA1107Q9UPP5 1409 aa34.64■■■■□ 3.14
CIRBP-219ENST00000588411 DIP2CQ9Y2E4 1556 aa34.63■■■■□ 3.13
CIRBP-219ENST00000588411 SYCP2Q9BX26 1530 aa34.62■■■■□ 3.13
CIRBP-219ENST00000588411 REREQ9P2R6 1566 aa34.6■■■■□ 3.13
CIRBP-219ENST00000588411 HNRNPMP52272 730 aaKnown RBP eCLIP34.58■■■■□ 3.13
CIRBP-219ENST00000588411 ABCA6Q8N139 1617 aa34.58■■■■□ 3.13
CIRBP-219ENST00000588411 TIAM1Q13009 1591 aa34.57■■■■□ 3.12
CIRBP-219ENST00000588411 SPAG9O60271 1321 aaKnown RBP34.56■■■■□ 3.12
CIRBP-219ENST00000588411 FER1L4A9Z1Z3 1794 aa34.55■■■■□ 3.12
CIRBP-219ENST00000588411 PLPPR3Q6T4P5 718 aa34.53■■■■□ 3.12
CIRBP-219ENST00000588411 KIDINS220Q9ULH0 1771 aa34.51■■■■□ 3.12
CIRBP-219ENST00000588411 SUPT6HQ7KZ85 1726 aaKnown RBP34.51■■■■□ 3.12
CIRBP-219ENST00000588411 NCOA2Q15596 1464 aa34.5■■■■□ 3.11
CIRBP-219ENST00000588411 AGLP35573 1532 aa34.5■■■■□ 3.11
CIRBP-219ENST00000588411 ESF1Q9H501 851 aaKnown RBP34.44■■■■□ 3.1
CIRBP-219ENST00000588411 ZNF644Q9H582 1327 aaPredicted RBP34.44■■■■□ 3.1
CIRBP-219ENST00000588411 ATP7AQ04656 1500 aa34.44■■■■□ 3.1
CIRBP-219ENST00000588411 LRRC9Q6ZRR7 1453 aa34.43■■■■□ 3.1
CIRBP-219ENST00000588411 MAP3K1Q13233 1512 aa34.42■■■■□ 3.1
CIRBP-219ENST00000588411 LMTK3Q96Q04 1460 aa34.42■■■■□ 3.1
CIRBP-219ENST00000588411 INO80Q9ULG1 1556 aaPredicted RBP34.39■■■■□ 3.1
CIRBP-219ENST00000588411 MBD5Q9P267 1494 aa34.37■■■■□ 3.09
CIRBP-219ENST00000588411 APLP2Q06481 763 aa34.35■■■■□ 3.09
CIRBP-219ENST00000588411 RSPH4AQ5TD94 716 aa34.34■■■■□ 3.09
CIRBP-219ENST00000588411 A2MP01023 1474 aa34.33■■■■□ 3.09
CIRBP-219ENST00000588411 CAMSAP2Q08AD1 1489 aa34.33■■■■□ 3.09
CIRBP-219ENST00000588411 CNTLNQ9NXG0 1405 aa34.32■■■■□ 3.08
CIRBP-219ENST00000588411 CEBPAP49715 358 aaPredicted RBP34.32■■■■□ 3.08
CIRBP-219ENST00000588411 RTEL1-TNFRSF6BF6WH68 1400 aa34.3■■■■□ 3.08
CIRBP-219ENST00000588411 CCDC141Q6ZP82 1450 aa34.3■■■■□ 3.08
CIRBP-219ENST00000588411 KANK4Q5T7N3 995 aaPredicted RBP34.29■■■■□ 3.08
CIRBP-219ENST00000588411 PLXNC1O60486 1568 aa34.27■■■■□ 3.08
CIRBP-219ENST00000588411 HSPA2P54652 639 aa34.25■■■■□ 3.07
CIRBP-219ENST00000588411 ADGBQ8N7X0 1667 aa34.24■■■■□ 3.07
CIRBP-219ENST00000588411 PREX1Q8TCU6 1659 aa34.21■■■■□ 3.07
CIRBP-219ENST00000588411 TSPY4P0CV99 314 aa34.2■■■■□ 3.07
CIRBP-219ENST00000588411 TSPY10P0CW01 314 aa34.2■■■■□ 3.07
CIRBP-219ENST00000588411 MYOM3Q5VTT5 1437 aa34.19■■■■□ 3.06
CIRBP-219ENST00000588411 UHRF1BP1Q6BDS2 1440 aa34.19■■■■□ 3.06
CIRBP-219ENST00000588411 ARHGEF5Q12774 1597 aa34.19■■■■□ 3.06
CIRBP-219ENST00000588411 MIA2Q96PC5 1412 aa34.18■■■■□ 3.06
CIRBP-219ENST00000588411 C3P01024 1663 aa34.18■■■■□ 3.06
CIRBP-219ENST00000588411 DHX29Q7Z478 1369 aaKnown RBP34.16■■■■□ 3.06
CIRBP-219ENST00000588411 GGT6Q6P531 493 aa34.16■■■■□ 3.06
CIRBP-219ENST00000588411 PPP6R1Q9UPN7 881 aa34.16■■■■□ 3.06
CIRBP-219ENST00000588411 SETD1BQ9UPS6 1966 aaKnown RBP34.15■■■■□ 3.06
CIRBP-219ENST00000588411 MROH2AA6NES4 1674 aa34.12■■■■□ 3.05
CIRBP-219ENST00000588411 ZMYM3Q14202 1370 aa34.11■■■■□ 3.05
CIRBP-219ENST00000588411 NPATQ14207 1427 aa34.08■■■■□ 3.05
CIRBP-219ENST00000588411 KIF3BO15066 747 aa34.05■■■■□ 3.04
CIRBP-219ENST00000588411 CLTCQ00610 1675 aaKnown RBP34.03■■■■□ 3.04
CIRBP-219ENST00000588411 ILDR1Q86SU0 546 aaPredicted RBP34.03■■■■□ 3.04
CIRBP-219ENST00000588411 MAST1Q9Y2H9 1570 aa34.01■■■■□ 3.03
CIRBP-219ENST00000588411 DMRT2Q9Y5R5 561 aa33.97■■■■□ 3.03
CIRBP-219ENST00000588411 FAM135AQ9P2D6 1515 aa33.96■■■■□ 3.03
CIRBP-219ENST00000588411 PTPRKQ15262 1439 aa33.93■■■■□ 3.02
CIRBP-219ENST00000588411 PTPN23Q9H3S7 1636 aa33.93■■■■□ 3.02
CIRBP-219ENST00000588411 FGD6Q6ZV73 1430 aa33.92■■■■□ 3.02
CIRBP-219ENST00000588411 KDM5DQ9BY66 1539 aa33.91■■■■□ 3.02
CIRBP-219ENST00000588411 WASHC2CQ9Y4E1 1318 aa33.9■■■■□ 3.02
CIRBP-219ENST00000588411 SHANK2Q9UPX8 1470 aa33.88■■■■□ 3.01
CIRBP-219ENST00000588411 TCOF1Q13428 1488 aaKnown RBP33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms