RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 KANK4Q5T7N3 995 aaPredicted RBP22.08■■□□□ 1.13
CCDC43-203ENST00000588210 EFCAB2Q5VUJ9 269 aa22.08■■□□□ 1.12
CCDC43-203ENST00000588210 SUPT6HQ7KZ85 1726 aaKnown RBP22.07■■□□□ 1.12
CCDC43-203ENST00000588210 COL17A1Q9UMD9 1497 aaPredicted RBP22.06■■□□□ 1.12
CCDC43-203ENST00000588210 AKNAQ7Z591 1439 aa22.06■■□□□ 1.12
CCDC43-203ENST00000588210 CCER1Q8TC90 406 aaPredicted RBP22.06■■□□□ 1.12
CCDC43-203ENST00000588210 PREX2Q70Z35 1606 aa22.06■■□□□ 1.12
CCDC43-203ENST00000588210 CCNB3Q8WWL7 1395 aa22.06■■□□□ 1.12
CCDC43-203ENST00000588210 ARHGAP5Q13017 1502 aa22.05■■□□□ 1.12
CCDC43-203ENST00000588210 CDC42BPAQ5VT25 1732 aa22.05■■□□□ 1.12
CCDC43-203ENST00000588210 CDC42BPBQ9Y5S2 1711 aa22.05■■□□□ 1.12
CCDC43-203ENST00000588210 GPATCH8Q9UKJ3 1502 aaKnown RBP22.04■■□□□ 1.12
CCDC43-203ENST00000588210 NCOA2Q15596 1464 aa22.04■■□□□ 1.12
CCDC43-203ENST00000588210 CFDP1Q9UEE9 299 aaPredicted RBP21.99■■□□□ 1.11
CCDC43-203ENST00000588210 ADGRL1O94910 1474 aa21.99■■□□□ 1.11
CCDC43-203ENST00000588210 ITSN2Q9NZM3 1697 aa21.98■■□□□ 1.11
CCDC43-203ENST00000588210 DENND4BO75064 1496 aaPredicted RBP21.97■■□□□ 1.11
CCDC43-203ENST00000588210 SCAPERQ9BY12 1400 aa21.96■■□□□ 1.11
CCDC43-203ENST00000588210 RAPGEF3O95398 923 aa21.95■■□□□ 1.1
CCDC43-203ENST00000588210 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
CCDC43-203ENST00000588210 SAMD9LQ8IVG5 1584 aa21.91■■□□□ 1.1
CCDC43-203ENST00000588210 ABCC1P33527 1531 aa21.91■■□□□ 1.1
CCDC43-203ENST00000588210 RICTORQ6R327 1708 aa21.91■■□□□ 1.1
CCDC43-203ENST00000588210 FRMPD1Q5SYB0 1578 aa21.9■■□□□ 1.1
CCDC43-203ENST00000588210 PLEKHH2Q8IVE3 1493 aa21.9■■□□□ 1.1
CCDC43-203ENST00000588210 POGZQ7Z3K3 1410 aa21.9■■□□□ 1.1
CCDC43-203ENST00000588210 MYOM3Q5VTT5 1437 aa21.89■■□□□ 1.09
CCDC43-203ENST00000588210 KIAA1107Q9UPP5 1409 aa21.88■■□□□ 1.09
CCDC43-203ENST00000588210 ZNF518AQ6AHZ1 1483 aa21.87■■□□□ 1.09
CCDC43-203ENST00000588210 MIA2Q96PC5 1412 aa21.87■■□□□ 1.09
CCDC43-203ENST00000588210 ARHGEF12Q9NZN5 1544 aa21.87■■□□□ 1.09
CCDC43-203ENST00000588210 ZNF644Q9H582 1327 aaPredicted RBP21.85■■□□□ 1.09
CCDC43-203ENST00000588210 ZMYM4Q5VZL5 1548 aa21.84■■□□□ 1.09
CCDC43-203ENST00000588210 SYCP2Q9BX26 1530 aa21.84■■□□□ 1.09
CCDC43-203ENST00000588210 AFAP1Q8N556 730 aa21.84■■□□□ 1.09
CCDC43-203ENST00000588210 HNRNPMP52272 730 aaKnown RBP eCLIP21.83■■□□□ 1.09
CCDC43-203ENST00000588210 TRAPPC8Q9Y2L5 1435 aa21.83■■□□□ 1.09
CCDC43-203ENST00000588210 MAGI2Q86UL8 1455 aa21.82■■□□□ 1.08
CCDC43-203ENST00000588210 CAMSAP2Q08AD1 1489 aa21.82■■□□□ 1.08
CCDC43-203ENST00000588210 KDM5CP41229 1560 aa21.82■■□□□ 1.08
CCDC43-203ENST00000588210 MBD5Q9P267 1494 aa21.79■■□□□ 1.08
CCDC43-203ENST00000588210 RSPH4AQ5TD94 716 aa21.78■■□□□ 1.08
CCDC43-203ENST00000588210 FGD6Q6ZV73 1430 aa21.78■■□□□ 1.08
CCDC43-203ENST00000588210 MLH3Q9UHC1 1453 aa21.77■■□□□ 1.07
CCDC43-203ENST00000588210 ZFYVE16Q7Z3T8 1539 aa21.76■■□□□ 1.07
CCDC43-203ENST00000588210 HECW2Q9P2P5 1572 aa21.75■■□□□ 1.07
CCDC43-203ENST00000588210 ARHGEF40Q8TER5 1519 aa21.75■■□□□ 1.07
CCDC43-203ENST00000588210 PTPN23Q9H3S7 1636 aa21.74■■□□□ 1.07
CCDC43-203ENST00000588210 MYT1LQ9UL68 1186 aa21.74■■□□□ 1.07
CCDC43-203ENST00000588210 YEATS2Q9ULM3 1422 aa21.74■■□□□ 1.07
CCDC43-203ENST00000588210 SPAG9O60271 1321 aaKnown RBP21.73■■□□□ 1.07
CCDC43-203ENST00000588210 CCDC141Q6ZP82 1450 aa21.73■■□□□ 1.07
CCDC43-203ENST00000588210 ARHGEF5Q12774 1597 aa21.73■■□□□ 1.07
CCDC43-203ENST00000588210 TCOF1Q13428 1488 aaKnown RBP21.72■■□□□ 1.07
CCDC43-203ENST00000588210 SCAF1Q9H7N4 1312 aaKnown RBP21.72■■□□□ 1.07
CCDC43-203ENST00000588210 KIDINS220Q9ULH0 1771 aa21.69■■□□□ 1.06
CCDC43-203ENST00000588210 ATP10AO60312 1499 aa21.69■■□□□ 1.06
CCDC43-203ENST00000588210 TSPY4P0CV99 314 aa21.68■■□□□ 1.06
CCDC43-203ENST00000588210 TSPY10P0CW01 314 aa21.68■■□□□ 1.06
CCDC43-203ENST00000588210 RTEL1-TNFRSF6BF6WH68 1400 aa21.68■■□□□ 1.06
CCDC43-203ENST00000588210 ATP7AQ04656 1500 aa21.67■■□□□ 1.06
CCDC43-203ENST00000588210 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
CCDC43-203ENST00000588210 INO80Q9ULG1 1556 aaPredicted RBP21.67■■□□□ 1.06
CCDC43-203ENST00000588210 DIP2CQ9Y2E4 1556 aa21.66■■□□□ 1.06
CCDC43-203ENST00000588210 C9orf84Q5VXU9 1444 aa21.66■■□□□ 1.06
CCDC43-203ENST00000588210 ABCA6Q8N139 1617 aa21.65■■□□□ 1.06
CCDC43-203ENST00000588210 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.05
CCDC43-203ENST00000588210 REREQ9P2R6 1566 aa21.62■■□□□ 1.05
CCDC43-203ENST00000588210 DNMT1P26358 1616 aaKnown RBP21.61■■□□□ 1.05
CCDC43-203ENST00000588210 ABCC5O15440 1437 aa21.61■■□□□ 1.05
CCDC43-203ENST00000588210 ARID4BQ4LE39 1312 aaPredicted RBP21.61■■□□□ 1.05
CCDC43-203ENST00000588210 MAST1Q9Y2H9 1570 aa21.61■■□□□ 1.05
CCDC43-203ENST00000588210 DAPK1P53355 1430 aa21.61■■□□□ 1.05
CCDC43-203ENST00000588210 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.59■■□□□ 1.05
CCDC43-203ENST00000588210 SHANK2Q9UPX8 1470 aa21.59■■□□□ 1.05
CCDC43-203ENST00000588210 RRBP1Q9P2E9 1410 aaKnown RBP21.58■■□□□ 1.04
CCDC43-203ENST00000588210 CROCC2H7BZ55 1655 aa21.57■■□□□ 1.04
CCDC43-203ENST00000588210 SIGLEC1Q9BZZ2 1709 aa21.57■■□□□ 1.04
CCDC43-203ENST00000588210 ADGBQ8N7X0 1667 aa21.57■■□□□ 1.04
CCDC43-203ENST00000588210 A2MP01023 1474 aa21.56■■□□□ 1.04
CCDC43-203ENST00000588210 ACIN1Q9UKV3 1341 aaKnown RBP21.56■■□□□ 1.04
CCDC43-203ENST00000588210 AGLP35573 1532 aa21.55■■□□□ 1.04
CCDC43-203ENST00000588210 KDM4FA0A1W2PPD8 638 aa21.55■■□□□ 1.04
CCDC43-203ENST00000588210 ZNF316A6NFI3 1004 aaPredicted RBP21.55■■□□□ 1.04
CCDC43-203ENST00000588210 BCORL1Q5H9F3 1711 aa21.53■■□□□ 1.04
CCDC43-203ENST00000588210 DHX29Q7Z478 1369 aaKnown RBP21.53■■□□□ 1.04
CCDC43-203ENST00000588210 PLXNC1O60486 1568 aa21.52■■□□□ 1.04
CCDC43-203ENST00000588210 CHIC2Q9UKJ5 165 aa21.49■■□□□ 1.03
CCDC43-203ENST00000588210 ANKRD30AQ9BXX3 1397 aa21.49■■□□□ 1.03
CCDC43-203ENST00000588210 ADAMTSL3P82987 1691 aa21.48■■□□□ 1.03
CCDC43-203ENST00000588210 MLECQ14165 292 aa21.48■■□□□ 1.03
CCDC43-203ENST00000588210 ADGRL2O95490 1459 aa21.47■■□□□ 1.03
CCDC43-203ENST00000588210 NCOA1Q15788 1441 aa21.46■■□□□ 1.03
CCDC43-203ENST00000588210 PTPRKQ15262 1439 aa21.46■■□□□ 1.03
CCDC43-203ENST00000588210 KIF15Q9NS87 1388 aa21.46■■□□□ 1.03
CCDC43-203ENST00000588210 NEUROD1Q13562 356 aa21.46■■□□□ 1.03
CCDC43-203ENST00000588210 RRP7BPQ9NSQ0 103 aa21.46■■□□□ 1.03
CCDC43-203ENST00000588210 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
CCDC43-203ENST00000588210 CENPBP07199 599 aaPredicted RBP21.45■■□□□ 1.02
CCDC43-203ENST00000588210 ITGAEP38570 1179 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms