RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 CLIP1P30622 1438 aa21.86■■□□□ 1.09
PKN1-211ENST00000588200 ZFYVE16Q7Z3T8 1539 aa21.85■■□□□ 1.09
PKN1-211ENST00000588200 CCDC18Q5T9S5 1454 aa21.85■■□□□ 1.09
PKN1-211ENST00000588200 ATP1B4Q9UN42 357 aaPredicted RBP21.85■■□□□ 1.09
PKN1-211ENST00000588200 MADDQ8WXG6 1647 aa21.84■■□□□ 1.09
PKN1-211ENST00000588200 ARID4BQ4LE39 1312 aaPredicted RBP21.82■■□□□ 1.08
PKN1-211ENST00000588200 YEATS2Q9ULM3 1422 aa21.82■■□□□ 1.08
PKN1-211ENST00000588200 PCF11O94913 1555 aaKnown RBP21.79■■□□□ 1.08
PKN1-211ENST00000588200 ZNF518AQ6AHZ1 1483 aa21.79■■□□□ 1.08
PKN1-211ENST00000588200 FYCO1Q9BQS8 1478 aa21.78■■□□□ 1.08
PKN1-211ENST00000588200 SIGLEC1Q9BZZ2 1709 aa21.78■■□□□ 1.08
PKN1-211ENST00000588200 KDM5CP41229 1560 aa21.78■■□□□ 1.08
PKN1-211ENST00000588200 CDC42BPBQ9Y5S2 1711 aa21.77■■□□□ 1.08
PKN1-211ENST00000588200 ATP10AO60312 1499 aa21.77■■□□□ 1.08
PKN1-211ENST00000588200 ARHGAP5Q13017 1502 aa21.75■■□□□ 1.07
PKN1-211ENST00000588200 PREX2Q70Z35 1606 aa21.73■■□□□ 1.07
PKN1-211ENST00000588200 C9orf84Q5VXU9 1444 aa21.73■■□□□ 1.07
PKN1-211ENST00000588200 RIMS1Q86UR5 1692 aaKnown RBP21.73■■□□□ 1.07
PKN1-211ENST00000588200 REREQ9P2R6 1566 aa21.72■■□□□ 1.07
PKN1-211ENST00000588200 MLH3Q9UHC1 1453 aa21.71■■□□□ 1.07
PKN1-211ENST00000588200 LMTK3Q96Q04 1460 aa21.71■■□□□ 1.07
PKN1-211ENST00000588200 ARHGEF12Q9NZN5 1544 aa21.7■■□□□ 1.07
PKN1-211ENST00000588200 ILDR1Q86SU0 546 aaPredicted RBP21.68■■□□□ 1.06
PKN1-211ENST00000588200 AFAP1Q8N556 730 aa21.68■■□□□ 1.06
PKN1-211ENST00000588200 ABCC1P33527 1531 aa21.68■■□□□ 1.06
PKN1-211ENST00000588200 CDC42BPAQ5VT25 1732 aa21.68■■□□□ 1.06
PKN1-211ENST00000588200 FER1L4A9Z1Z3 1794 aa21.67■■□□□ 1.06
PKN1-211ENST00000588200 DIP2CQ9Y2E4 1556 aa21.64■■□□□ 1.05
PKN1-211ENST00000588200 ITSN2Q9NZM3 1697 aa21.63■■□□□ 1.05
PKN1-211ENST00000588200 AGLP35573 1532 aa21.62■■□□□ 1.05
PKN1-211ENST00000588200 TRAPPC8Q9Y2L5 1435 aa21.62■■□□□ 1.05
PKN1-211ENST00000588200 GPATCH8Q9UKJ3 1502 aaKnown RBP21.61■■□□□ 1.05
PKN1-211ENST00000588200 ABCA6Q8N139 1617 aa21.59■■□□□ 1.05
PKN1-211ENST00000588200 KIAA1107Q9UPP5 1409 aa21.58■■□□□ 1.05
PKN1-211ENST00000588200 KIDINS220Q9ULH0 1771 aa21.58■■□□□ 1.04
PKN1-211ENST00000588200 MLECQ14165 292 aa21.57■■□□□ 1.04
PKN1-211ENST00000588200 SETD1BQ9UPS6 1966 aaKnown RBP21.57■■□□□ 1.04
PKN1-211ENST00000588200 SAMD9LQ8IVG5 1584 aa21.56■■□□□ 1.04
PKN1-211ENST00000588200 PLEKHH2Q8IVE3 1493 aa21.54■■□□□ 1.04
PKN1-211ENST00000588200 PREX1Q8TCU6 1659 aa21.52■■□□□ 1.04
PKN1-211ENST00000588200 MTUS2Q5JR59 1369 aa21.5■■□□□ 1.03
PKN1-211ENST00000588200 SYCP2Q9BX26 1530 aa21.5■■□□□ 1.03
PKN1-211ENST00000588200 CEP162Q5TB80 1403 aa21.49■■□□□ 1.03
PKN1-211ENST00000588200 MYT1LQ9UL68 1186 aa21.49■■□□□ 1.03
PKN1-211ENST00000588200 CCNB3Q8WWL7 1395 aa21.48■■□□□ 1.03
PKN1-211ENST00000588200 CFDP1Q9UEE9 299 aaPredicted RBP21.48■■□□□ 1.03
PKN1-211ENST00000588200 EHBP1L1Q8N3D4 1523 aa21.48■■□□□ 1.03
PKN1-211ENST00000588200 HSPA2P54652 639 aa21.47■■□□□ 1.03
PKN1-211ENST00000588200 FBXO41Q8TF61 875 aa21.47■■□□□ 1.03
PKN1-211ENST00000588200 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
PKN1-211ENST00000588200 SPAG9O60271 1321 aaKnown RBP21.46■■□□□ 1.03
PKN1-211ENST00000588200 ZNF777Q9ULD5 760 aaPredicted RBP21.45■■□□□ 1.02
PKN1-211ENST00000588200 INO80Q9ULG1 1556 aaPredicted RBP21.44■■□□□ 1.02
PKN1-211ENST00000588200 C3P01024 1663 aa21.44■■□□□ 1.02
PKN1-211ENST00000588200 CEBPAP49715 358 aaPredicted RBP21.44■■□□□ 1.02
PKN1-211ENST00000588200 HNRNPMP52272 730 aaKnown RBP eCLIP21.44■■□□□ 1.02
PKN1-211ENST00000588200 ATP7AQ04656 1500 aa21.44■■□□□ 1.02
PKN1-211ENST00000588200 PLXNC1O60486 1568 aa21.43■■□□□ 1.02
PKN1-211ENST00000588200 TIAM1Q13009 1591 aa21.43■■□□□ 1.02
PKN1-211ENST00000588200 PLPPR3Q6T4P5 718 aa21.42■■□□□ 1.02
PKN1-211ENST00000588200 MROH2AA6NES4 1674 aa21.41■■□□□ 1.02
PKN1-211ENST00000588200 MBD5Q9P267 1494 aa21.41■■□□□ 1.02
PKN1-211ENST00000588200 UHRF1BP1Q6BDS2 1440 aa21.41■■□□□ 1.02
PKN1-211ENST00000588200 RTEL1-TNFRSF6BF6WH68 1400 aa21.39■■□□□ 1.02
PKN1-211ENST00000588200 ESF1Q9H501 851 aaKnown RBP21.38■■□□□ 1.01
PKN1-211ENST00000588200 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
PKN1-211ENST00000588200 A2MP01023 1474 aa21.37■■□□□ 1.01
PKN1-211ENST00000588200 NPATQ14207 1427 aa21.37■■□□□ 1.01
PKN1-211ENST00000588200 STRCQ7RTU9 1775 aa21.36■■□□□ 1.01
PKN1-211ENST00000588200 DMRT2Q9Y5R5 561 aa21.36■■□□□ 1.01
PKN1-211ENST00000588200 ADGBQ8N7X0 1667 aa21.36■■□□□ 1.01
PKN1-211ENST00000588200 RSPH4AQ5TD94 716 aa21.35■■□□□ 1.01
PKN1-211ENST00000588200 SUPT6HQ7KZ85 1726 aaKnown RBP21.35■■□□□ 1.01
PKN1-211ENST00000588200 NCOA2Q15596 1464 aa21.32■■□□□ 1
PKN1-211ENST00000588200 ZNF644Q9H582 1327 aaPredicted RBP21.32■■□□□ 1
PKN1-211ENST00000588200 ZMYM3Q14202 1370 aa21.32■■□□□ 1
PKN1-211ENST00000588200 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
PKN1-211ENST00000588200 MAP3K1Q13233 1512 aa21.31■■□□□ 1
PKN1-211ENST00000588200 PTPRTO14522 1441 aa21.29■■□□□ 1
PKN1-211ENST00000588200 DHX29Q7Z478 1369 aaKnown RBP21.28■■□□□ 1
PKN1-211ENST00000588200 CERKQ8TCT0 537 aa21.27■■□□□ 1
PKN1-211ENST00000588200 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
PKN1-211ENST00000588200 ARHGEF5Q12774 1597 aa21.26■□□□□ 0.99
PKN1-211ENST00000588200 CAMSAP2Q08AD1 1489 aa21.26■□□□□ 0.99
PKN1-211ENST00000588200 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
PKN1-211ENST00000588200 FAM135AQ9P2D6 1515 aa21.25■□□□□ 0.99
PKN1-211ENST00000588200 CLTCQ00610 1675 aaKnown RBP21.25■□□□□ 0.99
PKN1-211ENST00000588200 NCOA1Q15788 1441 aa21.23■□□□□ 0.99
PKN1-211ENST00000588200 LOC105371045A0A1W2PR82 267 aa21.23■□□□□ 0.99
PKN1-211ENST00000588200 PTPRKQ15262 1439 aa21.22■□□□□ 0.99
PKN1-211ENST00000588200 GGT6Q6P531 493 aa21.21■□□□□ 0.99
PKN1-211ENST00000588200 ZNF142P52746 1687 aaPredicted RBP21.21■□□□□ 0.99
PKN1-211ENST00000588200 PLA2R1Q13018 1463 aa21.18■□□□□ 0.98
PKN1-211ENST00000588200 MIA2Q96PC5 1412 aa21.17■□□□□ 0.98
PKN1-211ENST00000588200 CAMSAP1Q5T5Y3 1602 aa21.16■□□□□ 0.98
PKN1-211ENST00000588200 MYO3AQ8NEV4 1616 aa21.16■□□□□ 0.98
PKN1-211ENST00000588200 MAST1Q9Y2H9 1570 aa21.16■□□□□ 0.98
PKN1-211ENST00000588200 TSPY4P0CV99 314 aa21.16■□□□□ 0.98
PKN1-211ENST00000588200 TSPY10P0CW01 314 aa21.16■□□□□ 0.98
PKN1-211ENST00000588200 CEP170BQ9Y4F5 1589 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms