RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 POGZQ7Z3K3 1410 aa23.21■■□□□ 1.31
ERCC1-205ENST00000587888 RIMS1Q86UR5 1692 aaKnown RBP23.21■■□□□ 1.31
ERCC1-205ENST00000587888 ZMYM4Q5VZL5 1548 aa23.2■■□□□ 1.3
ERCC1-205ENST00000587888 MAGI2Q86UL8 1455 aa23.19■■□□□ 1.3
ERCC1-205ENST00000587888 MYO5CQ9NQX4 1742 aa23.16■■□□□ 1.3
ERCC1-205ENST00000587888 KIF14Q15058 1648 aa23.16■■□□□ 1.3
ERCC1-205ENST00000587888 MYT1LQ9UL68 1186 aa23.16■■□□□ 1.3
ERCC1-205ENST00000587888 SIGLEC1Q9BZZ2 1709 aa23.16■■□□□ 1.3
ERCC1-205ENST00000587888 TROQ12816 1431 aaPredicted RBP23.16■■□□□ 1.3
ERCC1-205ENST00000587888 CLIP1P30622 1438 aa23.15■■□□□ 1.3
ERCC1-205ENST00000587888 AFAP1Q8N556 730 aa23.14■■□□□ 1.29
ERCC1-205ENST00000587888 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
ERCC1-205ENST00000587888 ATP10AO60312 1499 aa23.12■■□□□ 1.29
ERCC1-205ENST00000587888 HSPA2P54652 639 aa23.12■■□□□ 1.29
ERCC1-205ENST00000587888 LRRIQ1Q96JM4 1722 aa23.12■■□□□ 1.29
ERCC1-205ENST00000587888 ARHGAP5Q13017 1502 aa23.12■■□□□ 1.29
ERCC1-205ENST00000587888 LMTK3Q96Q04 1460 aa23.11■■□□□ 1.29
ERCC1-205ENST00000587888 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
ERCC1-205ENST00000587888 FBXO41Q8TF61 875 aa23.06■■□□□ 1.28
ERCC1-205ENST00000587888 CASKIN1Q8WXD9 1431 aa23.06■■□□□ 1.28
ERCC1-205ENST00000587888 ZNF518AQ6AHZ1 1483 aa23.05■■□□□ 1.28
ERCC1-205ENST00000587888 FER1L4A9Z1Z3 1794 aa23.04■■□□□ 1.28
ERCC1-205ENST00000587888 CEBPAP49715 358 aaPredicted RBP23.04■■□□□ 1.28
ERCC1-205ENST00000587888 CDC42BPBQ9Y5S2 1711 aa23.02■■□□□ 1.28
ERCC1-205ENST00000587888 CCDC18Q5T9S5 1454 aa23.01■■□□□ 1.27
ERCC1-205ENST00000587888 ARHGEF12Q9NZN5 1544 aa22.99■■□□□ 1.27
ERCC1-205ENST00000587888 ZNF777Q9ULD5 760 aaPredicted RBP22.98■■□□□ 1.27
ERCC1-205ENST00000587888 KDM5CP41229 1560 aa22.97■■□□□ 1.27
ERCC1-205ENST00000587888 TRAPPC8Q9Y2L5 1435 aa22.97■■□□□ 1.27
ERCC1-205ENST00000587888 PREX2Q70Z35 1606 aa22.94■■□□□ 1.26
ERCC1-205ENST00000587888 DIP2CQ9Y2E4 1556 aa22.93■■□□□ 1.26
ERCC1-205ENST00000587888 FYCO1Q9BQS8 1478 aa22.92■■□□□ 1.26
ERCC1-205ENST00000587888 MLH3Q9UHC1 1453 aa22.92■■□□□ 1.26
ERCC1-205ENST00000587888 ESF1Q9H501 851 aaKnown RBP22.91■■□□□ 1.26
ERCC1-205ENST00000587888 ABCC1P33527 1531 aa22.91■■□□□ 1.26
ERCC1-205ENST00000587888 CDC42BPAQ5VT25 1732 aa22.9■■□□□ 1.26
ERCC1-205ENST00000587888 ABCA6Q8N139 1617 aa22.9■■□□□ 1.26
ERCC1-205ENST00000587888 HNRNPMP52272 730 aaKnown RBP eCLIP22.89■■□□□ 1.25
ERCC1-205ENST00000587888 ITSN2Q9NZM3 1697 aa22.88■■□□□ 1.25
ERCC1-205ENST00000587888 PREX1Q8TCU6 1659 aa22.85■■□□□ 1.25
ERCC1-205ENST00000587888 REREQ9P2R6 1566 aa22.84■■□□□ 1.25
ERCC1-205ENST00000587888 GPATCH8Q9UKJ3 1502 aaKnown RBP22.84■■□□□ 1.25
ERCC1-205ENST00000587888 CERKQ8TCT0 537 aa22.84■■□□□ 1.25
ERCC1-205ENST00000587888 CFDP1Q9UEE9 299 aaPredicted RBP22.84■■□□□ 1.25
ERCC1-205ENST00000587888 KIDINS220Q9ULH0 1771 aa22.83■■□□□ 1.24
ERCC1-205ENST00000587888 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
ERCC1-205ENST00000587888 CCNB3Q8WWL7 1395 aa22.82■■□□□ 1.24
ERCC1-205ENST00000587888 AGLP35573 1532 aa22.82■■□□□ 1.24
ERCC1-205ENST00000587888 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
ERCC1-205ENST00000587888 SAMD9LQ8IVG5 1584 aa22.81■■□□□ 1.24
ERCC1-205ENST00000587888 MTUS2Q5JR59 1369 aa22.8■■□□□ 1.24
ERCC1-205ENST00000587888 SYCP2Q9BX26 1530 aa22.79■■□□□ 1.24
ERCC1-205ENST00000587888 DMRT2Q9Y5R5 561 aa22.79■■□□□ 1.24
ERCC1-205ENST00000587888 SETD1BQ9UPS6 1966 aaKnown RBP22.78■■□□□ 1.24
ERCC1-205ENST00000587888 C3P01024 1663 aa22.77■■□□□ 1.24
ERCC1-205ENST00000587888 STRCQ7RTU9 1775 aa22.73■■□□□ 1.23
ERCC1-205ENST00000587888 ZNF644Q9H582 1327 aaPredicted RBP22.73■■□□□ 1.23
ERCC1-205ENST00000587888 KIAA1107Q9UPP5 1409 aa22.73■■□□□ 1.23
ERCC1-205ENST00000587888 SUPT6HQ7KZ85 1726 aaKnown RBP22.72■■□□□ 1.23
ERCC1-205ENST00000587888 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
ERCC1-205ENST00000587888 PLEKHH2Q8IVE3 1493 aa22.72■■□□□ 1.23
ERCC1-205ENST00000587888 GGT6Q6P531 493 aa22.7■■□□□ 1.22
ERCC1-205ENST00000587888 ATP7AQ04656 1500 aa22.69■■□□□ 1.22
ERCC1-205ENST00000587888 ZMYM3Q14202 1370 aa22.69■■□□□ 1.22
ERCC1-205ENST00000587888 A2MP01023 1474 aa22.66■■□□□ 1.22
ERCC1-205ENST00000587888 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
ERCC1-205ENST00000587888 TIAM1Q13009 1591 aa22.63■■□□□ 1.21
ERCC1-205ENST00000587888 INO80Q9ULG1 1556 aaPredicted RBP22.63■■□□□ 1.21
ERCC1-205ENST00000587888 PTPRTO14522 1441 aa22.62■■□□□ 1.21
ERCC1-205ENST00000587888 EHBP1L1Q8N3D4 1523 aa22.62■■□□□ 1.21
ERCC1-205ENST00000587888 CLTCQ00610 1675 aaKnown RBP22.61■■□□□ 1.21
ERCC1-205ENST00000587888 NPATQ14207 1427 aa22.6■■□□□ 1.21
ERCC1-205ENST00000587888 MROH2AA6NES4 1674 aa22.6■■□□□ 1.21
ERCC1-205ENST00000587888 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
ERCC1-205ENST00000587888 PLXNC1O60486 1568 aa22.59■■□□□ 1.21
ERCC1-205ENST00000587888 NCKAP5LQ9HCH0 1330 aa22.58■■□□□ 1.21
ERCC1-205ENST00000587888 LOC105371045A0A1W2PR82 267 aa22.58■■□□□ 1.21
ERCC1-205ENST00000587888 NCOA1Q15788 1441 aa22.57■■□□□ 1.2
ERCC1-205ENST00000587888 PPP6R1Q9UPN7 881 aa22.56■■□□□ 1.2
ERCC1-205ENST00000587888 CAMSAP1Q5T5Y3 1602 aa22.56■■□□□ 1.2
ERCC1-205ENST00000587888 ADGBQ8N7X0 1667 aa22.55■■□□□ 1.2
ERCC1-205ENST00000587888 RTEL1-TNFRSF6BF6WH68 1400 aa22.54■■□□□ 1.2
ERCC1-205ENST00000587888 PTPRKQ15262 1439 aa22.54■■□□□ 1.2
ERCC1-205ENST00000587888 DHX29Q7Z478 1369 aaKnown RBP22.53■■□□□ 1.2
ERCC1-205ENST00000587888 KIF3BO15066 747 aa22.53■■□□□ 1.2
ERCC1-205ENST00000587888 NCOA2Q15596 1464 aa22.53■■□□□ 1.2
ERCC1-205ENST00000587888 RSPH4AQ5TD94 716 aa22.51■■□□□ 1.19
ERCC1-205ENST00000587888 CAMSAP2Q08AD1 1489 aa22.49■■□□□ 1.19
ERCC1-205ENST00000587888 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
ERCC1-205ENST00000587888 LTBP4Q8N2S1 1624 aa22.47■■□□□ 1.19
ERCC1-205ENST00000587888 TSPY4P0CV99 314 aa22.47■■□□□ 1.19
ERCC1-205ENST00000587888 TSPY10P0CW01 314 aa22.47■■□□□ 1.19
ERCC1-205ENST00000587888 FBXO31Q5XUX0 539 aaPredicted RBP22.47■■□□□ 1.19
ERCC1-205ENST00000587888 MYO3AQ8NEV4 1616 aa22.46■■□□□ 1.19
ERCC1-205ENST00000587888 PKD2Q13563 968 aa22.46■■□□□ 1.19
ERCC1-205ENST00000587888 ZNF335Q9H4Z2 1342 aaPredicted RBP22.45■■□□□ 1.18
ERCC1-205ENST00000587888 WASHC2CQ9Y4E1 1318 aa22.45■■□□□ 1.18
ERCC1-205ENST00000587888 CEP170BQ9Y4F5 1589 aaPredicted RBP22.44■■□□□ 1.18
ERCC1-205ENST00000587888 VPS8Q8N3P4 1428 aa22.42■■□□□ 1.18
ERCC1-205ENST00000587888 KANK4Q5T7N3 995 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 191.1 ms