RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 EFCAB2Q5VUJ9 269 aa38.9■■■■□ 3.82
CAPNS1-204ENST00000587718 ARHGEF40Q8TER5 1519 aa38.9■■■■□ 3.82
CAPNS1-204ENST00000587718 SCAPERQ9BY12 1400 aa38.9■■■■□ 3.82
CAPNS1-204ENST00000587718 ADAMTSL3P82987 1691 aa38.88■■■■□ 3.81
CAPNS1-204ENST00000587718 CCDC18Q5T9S5 1454 aa38.86■■■■□ 3.81
CAPNS1-204ENST00000587718 MYO5CQ9NQX4 1742 aa38.85■■■■□ 3.81
CAPNS1-204ENST00000587718 POGZQ7Z3K3 1410 aa38.84■■■■□ 3.81
CAPNS1-204ENST00000587718 MAGI2Q86UL8 1455 aa38.84■■■■□ 3.81
CAPNS1-204ENST00000587718 YEATS2Q9ULM3 1422 aa38.82■■■■□ 3.81
CAPNS1-204ENST00000587718 ARID4BQ4LE39 1312 aaPredicted RBP38.82■■■■□ 3.8
CAPNS1-204ENST00000587718 BCORL1Q5H9F3 1711 aa38.8■■■■□ 3.8
CAPNS1-204ENST00000587718 FYCO1Q9BQS8 1478 aa38.8■■■■□ 3.8
CAPNS1-204ENST00000587718 HECW2Q9P2P5 1572 aa38.79■■■■□ 3.8
CAPNS1-204ENST00000587718 ZFYVE16Q7Z3T8 1539 aa38.78■■■■□ 3.8
CAPNS1-204ENST00000587718 PTPRMP28827 1452 aa38.78■■■■□ 3.8
CAPNS1-204ENST00000587718 ARHGAP5Q13017 1502 aa38.73■■■■□ 3.79
CAPNS1-204ENST00000587718 PPARGC1BQ86YN6 1023 aaKnown RBP38.72■■■■□ 3.79
CAPNS1-204ENST00000587718 MADDQ8WXG6 1647 aa38.69■■■■□ 3.78
CAPNS1-204ENST00000587718 SIGLEC1Q9BZZ2 1709 aa38.68■■■■□ 3.78
CAPNS1-204ENST00000587718 CDC42BPBQ9Y5S2 1711 aa38.67■■■■□ 3.78
CAPNS1-204ENST00000587718 ZNF518AQ6AHZ1 1483 aa38.65■■■■□ 3.78
CAPNS1-204ENST00000587718 AFAP1Q8N556 730 aa38.65■■■■□ 3.78
CAPNS1-204ENST00000587718 PREX2Q70Z35 1606 aa38.62■■■■□ 3.77
CAPNS1-204ENST00000587718 ATP10AO60312 1499 aa38.61■■■■□ 3.77
CAPNS1-204ENST00000587718 KDM5CP41229 1560 aa38.61■■■■□ 3.77
CAPNS1-204ENST00000587718 ARHGEF12Q9NZN5 1544 aa38.56■■■■□ 3.76
CAPNS1-204ENST00000587718 C9orf84Q5VXU9 1444 aa38.55■■■■□ 3.76
CAPNS1-204ENST00000587718 APLP2Q06481 763 aa38.54■■■■□ 3.76
CAPNS1-204ENST00000587718 ABCC1P33527 1531 aa38.52■■■■□ 3.76
CAPNS1-204ENST00000587718 CDC42BPAQ5VT25 1732 aa38.52■■■■□ 3.76
CAPNS1-204ENST00000587718 RIMS1Q86UR5 1692 aaKnown RBP38.51■■■■□ 3.76
CAPNS1-204ENST00000587718 TRAPPC8Q9Y2L5 1435 aa38.51■■■■□ 3.76
CAPNS1-204ENST00000587718 GPATCH8Q9UKJ3 1502 aaKnown RBP38.49■■■■□ 3.75
CAPNS1-204ENST00000587718 MLH3Q9UHC1 1453 aa38.49■■■■□ 3.75
CAPNS1-204ENST00000587718 MLECQ14165 292 aa38.48■■■■□ 3.75
CAPNS1-204ENST00000587718 ITSN2Q9NZM3 1697 aa38.42■■■■□ 3.74
CAPNS1-204ENST00000587718 DIP2CQ9Y2E4 1556 aa38.42■■■■□ 3.74
CAPNS1-204ENST00000587718 MTUS2Q5JR59 1369 aa38.4■■■■□ 3.74
CAPNS1-204ENST00000587718 MYT1LQ9UL68 1186 aa38.39■■■■□ 3.74
CAPNS1-204ENST00000587718 ZNF777Q9ULD5 760 aaPredicted RBP38.38■■■■□ 3.73
CAPNS1-204ENST00000587718 SAMD9LQ8IVG5 1584 aa38.38■■■■□ 3.73
CAPNS1-204ENST00000587718 REREQ9P2R6 1566 aa38.38■■■■□ 3.73
CAPNS1-204ENST00000587718 LMTK3Q96Q04 1460 aa38.37■■■■□ 3.73
CAPNS1-204ENST00000587718 ABCA6Q8N139 1617 aa38.35■■■■□ 3.73
CAPNS1-204ENST00000587718 CCNB3Q8WWL7 1395 aa38.34■■■■□ 3.73
CAPNS1-204ENST00000587718 FER1L4A9Z1Z3 1794 aa38.33■■■■□ 3.73
CAPNS1-204ENST00000587718 CFDP1Q9UEE9 299 aaPredicted RBP38.33■■■■□ 3.73
CAPNS1-204ENST00000587718 KIAA1107Q9UPP5 1409 aa38.3■■■■□ 3.72
CAPNS1-204ENST00000587718 HNRNPMP52272 730 aaKnown RBP eCLIP38.3■■■■□ 3.72
CAPNS1-204ENST00000587718 PLPPR3Q6T4P5 718 aa38.3■■■■□ 3.72
CAPNS1-204ENST00000587718 KIDINS220Q9ULH0 1771 aa38.3■■■■□ 3.72
CAPNS1-204ENST00000587718 MAP3K1Q13233 1512 aa38.29■■■■□ 3.72
CAPNS1-204ENST00000587718 SYCP2Q9BX26 1530 aa38.29■■■■□ 3.72
CAPNS1-204ENST00000587718 AGLP35573 1532 aa38.27■■■■□ 3.72
CAPNS1-204ENST00000587718 EHBP1L1Q8N3D4 1523 aa38.27■■■■□ 3.72
CAPNS1-204ENST00000587718 PLEKHH2Q8IVE3 1493 aa38.24■■■■□ 3.71
CAPNS1-204ENST00000587718 CCER1Q8TC90 406 aaPredicted RBP38.23■■■■□ 3.71
CAPNS1-204ENST00000587718 TIAM1Q13009 1591 aa38.21■■■■□ 3.71
CAPNS1-204ENST00000587718 ILDR1Q86SU0 546 aaPredicted RBP38.21■■■■□ 3.71
CAPNS1-204ENST00000587718 SPAG9O60271 1321 aaKnown RBP38.2■■■■□ 3.71
CAPNS1-204ENST00000587718 CEBPAP49715 358 aaPredicted RBP38.19■■■■□ 3.7
CAPNS1-204ENST00000587718 HSPA2P54652 639 aa38.17■■■■□ 3.7
CAPNS1-204ENST00000587718 ZNF644Q9H582 1327 aaPredicted RBP38.16■■■■□ 3.7
CAPNS1-204ENST00000587718 MBD5Q9P267 1494 aa38.11■■■■□ 3.69
CAPNS1-204ENST00000587718 ATP7AQ04656 1500 aa38.1■■■■□ 3.69
CAPNS1-204ENST00000587718 INO80Q9ULG1 1556 aaPredicted RBP38.08■■■■□ 3.69
CAPNS1-204ENST00000587718 NCOA2Q15596 1464 aa38.08■■■■□ 3.69
CAPNS1-204ENST00000587718 RRBP1Q9P2E9 1410 aaKnown RBP38.02■■■■□ 3.68
CAPNS1-204ENST00000587718 SUPT6HQ7KZ85 1726 aaKnown RBP38.01■■■■□ 3.68
CAPNS1-204ENST00000587718 PLXNC1O60486 1568 aa38■■■■□ 3.67
CAPNS1-204ENST00000587718 ESF1Q9H501 851 aaKnown RBP38■■■■□ 3.67
CAPNS1-204ENST00000587718 A2MP01023 1474 aa38■■■■□ 3.67
CAPNS1-204ENST00000587718 PREX1Q8TCU6 1659 aa38■■■■□ 3.67
CAPNS1-204ENST00000587718 CNTLNQ9NXG0 1405 aa37.98■■■■□ 3.67
CAPNS1-204ENST00000587718 C3P01024 1663 aa37.97■■■■□ 3.67
CAPNS1-204ENST00000587718 LRRC9Q6ZRR7 1453 aa37.97■■■■□ 3.67
CAPNS1-204ENST00000587718 RTEL1-TNFRSF6BF6WH68 1400 aa37.95■■■■□ 3.67
CAPNS1-204ENST00000587718 SETD1BQ9UPS6 1966 aaKnown RBP37.93■■■■□ 3.66
CAPNS1-204ENST00000587718 UHRF1BP1Q6BDS2 1440 aa37.92■■■■□ 3.66
CAPNS1-204ENST00000587718 CAMSAP2Q08AD1 1489 aa37.91■■■■□ 3.66
CAPNS1-204ENST00000587718 KANK4Q5T7N3 995 aaPredicted RBP37.9■■■■□ 3.66
CAPNS1-204ENST00000587718 RSPH4AQ5TD94 716 aa37.89■■■■□ 3.66
CAPNS1-204ENST00000587718 ZMYM3Q14202 1370 aa37.86■■■■□ 3.65
CAPNS1-204ENST00000587718 ADGBQ8N7X0 1667 aa37.86■■■■□ 3.65
CAPNS1-204ENST00000587718 CCDC141Q6ZP82 1450 aa37.86■■■■□ 3.65
CAPNS1-204ENST00000587718 MROH2AA6NES4 1674 aa37.84■■■■□ 3.65
CAPNS1-204ENST00000587718 DHX29Q7Z478 1369 aaKnown RBP37.83■■■■□ 3.65
CAPNS1-204ENST00000587718 GGT6Q6P531 493 aa37.82■■■■□ 3.65
CAPNS1-204ENST00000587718 PPP6R1Q9UPN7 881 aa37.8■■■■□ 3.64
CAPNS1-204ENST00000587718 FBXO41Q8TF61 875 aa37.8■■■■□ 3.64
CAPNS1-204ENST00000587718 NPATQ14207 1427 aa37.79■■■■□ 3.64
CAPNS1-204ENST00000587718 ARHGEF5Q12774 1597 aa37.77■■■■□ 3.64
CAPNS1-204ENST00000587718 CLSPNQ9HAW4 1339 aa37.75■■■■□ 3.63
CAPNS1-204ENST00000587718 STRCQ7RTU9 1775 aa37.74■■■■□ 3.63
CAPNS1-204ENST00000587718 CLTCQ00610 1675 aaKnown RBP37.73■■■■□ 3.63
CAPNS1-204ENST00000587718 MYOM3Q5VTT5 1437 aa37.69■■■■□ 3.62
CAPNS1-204ENST00000587718 MIA2Q96PC5 1412 aa37.69■■■■□ 3.62
CAPNS1-204ENST00000587718 TSPY4P0CV99 314 aa37.69■■■■□ 3.62
CAPNS1-204ENST00000587718 TSPY10P0CW01 314 aa37.69■■■■□ 3.62
CAPNS1-204ENST00000587718 DMRT2Q9Y5R5 561 aa37.69■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms