RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 ZMYM4Q5VZL5 1548 aa37.43■■■■□ 3.58
LSM7-204ENST00000587502 MAGI2Q86UL8 1455 aa37.42■■■■□ 3.58
LSM7-204ENST00000587502 POGZQ7Z3K3 1410 aa37.41■■■■□ 3.58
LSM7-204ENST00000587502 ARHGEF40Q8TER5 1519 aa37.41■■■■□ 3.58
LSM7-204ENST00000587502 ARID4BQ4LE39 1312 aaPredicted RBP37.36■■■■□ 3.57
LSM7-204ENST00000587502 ZFYVE16Q7Z3T8 1539 aa37.33■■■■□ 3.57
LSM7-204ENST00000587502 CDC42BPBQ9Y5S2 1711 aa37.3■■■■□ 3.56
LSM7-204ENST00000587502 PREX2Q70Z35 1606 aa37.3■■■■□ 3.56
LSM7-204ENST00000587502 ZNF518AQ6AHZ1 1483 aa37.29■■■■□ 3.56
LSM7-204ENST00000587502 LOC105371045A0A1W2PR82 267 aa37.29■■■■□ 3.56
LSM7-204ENST00000587502 MTUS2Q5JR59 1369 aa37.26■■■■□ 3.55
LSM7-204ENST00000587502 YEATS2Q9ULM3 1422 aa37.26■■■■□ 3.55
LSM7-204ENST00000587502 ADAMTSL3P82987 1691 aa37.25■■■■□ 3.55
LSM7-204ENST00000587502 BCORL1Q5H9F3 1711 aa37.24■■■■□ 3.55
LSM7-204ENST00000587502 CDC42BPAQ5VT25 1732 aa37.21■■■■□ 3.55
LSM7-204ENST00000587502 AFAP1Q8N556 730 aa37.2■■■■□ 3.55
LSM7-204ENST00000587502 ATP10AO60312 1499 aa37.18■■■■□ 3.54
LSM7-204ENST00000587502 KDM5CP41229 1560 aa37.17■■■■□ 3.54
LSM7-204ENST00000587502 ABCC1P33527 1531 aa37.16■■■■□ 3.54
LSM7-204ENST00000587502 GPATCH8Q9UKJ3 1502 aaKnown RBP37.16■■■■□ 3.54
LSM7-204ENST00000587502 CCNB3Q8WWL7 1395 aa37.15■■■■□ 3.54
LSM7-204ENST00000587502 MYT1LQ9UL68 1186 aa37.14■■■■□ 3.54
LSM7-204ENST00000587502 PTPRMP28827 1452 aa37.13■■■■□ 3.54
LSM7-204ENST00000587502 C9orf84Q5VXU9 1444 aa37.12■■■■□ 3.53
LSM7-204ENST00000587502 EHBP1L1Q8N3D4 1523 aa37.12■■■■□ 3.53
LSM7-204ENST00000587502 CFDP1Q9UEE9 299 aaPredicted RBP37.1■■■■□ 3.53
LSM7-204ENST00000587502 ZNF777Q9ULD5 760 aaPredicted RBP37.1■■■■□ 3.53
LSM7-204ENST00000587502 MLH3Q9UHC1 1453 aa37.09■■■■□ 3.53
LSM7-204ENST00000587502 ARHGEF12Q9NZN5 1544 aa37.09■■■■□ 3.53
LSM7-204ENST00000587502 HECW2Q9P2P5 1572 aa37.08■■■■□ 3.53
LSM7-204ENST00000587502 MADDQ8WXG6 1647 aa37.08■■■■□ 3.53
LSM7-204ENST00000587502 VPS8Q8N3P4 1428 aa37.08■■■■□ 3.53
LSM7-204ENST00000587502 TRAPPC8Q9Y2L5 1435 aa37.08■■■■□ 3.53
LSM7-204ENST00000587502 ITSN2Q9NZM3 1697 aa37.08■■■■□ 3.53
LSM7-204ENST00000587502 PLEKHH2Q8IVE3 1493 aa37.04■■■■□ 3.52
LSM7-204ENST00000587502 SAMD9LQ8IVG5 1584 aa37.02■■■■□ 3.52
LSM7-204ENST00000587502 SIGLEC1Q9BZZ2 1709 aa37.02■■■■□ 3.52
LSM7-204ENST00000587502 KIAA1107Q9UPP5 1409 aa37.02■■■■□ 3.52
LSM7-204ENST00000587502 MLECQ14165 292 aa36.99■■■■□ 3.51
LSM7-204ENST00000587502 DIP2CQ9Y2E4 1556 aa36.97■■■■□ 3.51
LSM7-204ENST00000587502 REREQ9P2R6 1566 aa36.96■■■■□ 3.51
LSM7-204ENST00000587502 SYCP2Q9BX26 1530 aa36.96■■■■□ 3.51
LSM7-204ENST00000587502 RIMS1Q86UR5 1692 aaKnown RBP36.96■■■■□ 3.51
LSM7-204ENST00000587502 TIAM1Q13009 1591 aa36.95■■■■□ 3.51
LSM7-204ENST00000587502 HNRNPMP52272 730 aaKnown RBP eCLIP36.95■■■■□ 3.51
LSM7-204ENST00000587502 ABCA6Q8N139 1617 aa36.92■■■■□ 3.5
LSM7-204ENST00000587502 SPAG9O60271 1321 aaKnown RBP36.91■■■■□ 3.5
LSM7-204ENST00000587502 SUPT6HQ7KZ85 1726 aaKnown RBP36.91■■■■□ 3.5
LSM7-204ENST00000587502 KIDINS220Q9ULH0 1771 aa36.89■■■■□ 3.5
LSM7-204ENST00000587502 FER1L4A9Z1Z3 1794 aa36.88■■■■□ 3.49
LSM7-204ENST00000587502 NCOA2Q15596 1464 aa36.88■■■■□ 3.49
LSM7-204ENST00000587502 MAP3K1Q13233 1512 aa36.87■■■■□ 3.49
LSM7-204ENST00000587502 AGLP35573 1532 aa36.85■■■■□ 3.49
LSM7-204ENST00000587502 LRRC9Q6ZRR7 1453 aa36.83■■■■□ 3.49
LSM7-204ENST00000587502 ZNF644Q9H582 1327 aaPredicted RBP36.81■■■■□ 3.48
LSM7-204ENST00000587502 ATP7AQ04656 1500 aa36.78■■■■□ 3.48
LSM7-204ENST00000587502 PLPPR3Q6T4P5 718 aa36.76■■■■□ 3.48
LSM7-204ENST00000587502 MBD5Q9P267 1494 aa36.75■■■■□ 3.47
LSM7-204ENST00000587502 RSPH4AQ5TD94 716 aa36.75■■■■□ 3.47
LSM7-204ENST00000587502 APLP2Q06481 763 aa36.74■■■■□ 3.47
LSM7-204ENST00000587502 INO80Q9ULG1 1556 aaPredicted RBP36.74■■■■□ 3.47
LSM7-204ENST00000587502 ESF1Q9H501 851 aaKnown RBP36.73■■■■□ 3.47
LSM7-204ENST00000587502 KANK4Q5T7N3 995 aaPredicted RBP36.69■■■■□ 3.46
LSM7-204ENST00000587502 LMTK3Q96Q04 1460 aa36.69■■■■□ 3.46
LSM7-204ENST00000587502 RTEL1-TNFRSF6BF6WH68 1400 aa36.68■■■■□ 3.46
LSM7-204ENST00000587502 CAMSAP2Q08AD1 1489 aa36.68■■■■□ 3.46
LSM7-204ENST00000587502 A2MP01023 1474 aa36.66■■■■□ 3.46
LSM7-204ENST00000587502 CCDC141Q6ZP82 1450 aa36.64■■■■□ 3.46
LSM7-204ENST00000587502 CNTLNQ9NXG0 1405 aa36.63■■■■□ 3.45
LSM7-204ENST00000587502 CEBPAP49715 358 aaPredicted RBP36.61■■■■□ 3.45
LSM7-204ENST00000587502 PLXNC1O60486 1568 aa36.6■■■■□ 3.45
LSM7-204ENST00000587502 ADGBQ8N7X0 1667 aa36.6■■■■□ 3.45
LSM7-204ENST00000587502 MIA2Q96PC5 1412 aa36.57■■■■□ 3.44
LSM7-204ENST00000587502 TSPY4P0CV99 314 aa36.56■■■■□ 3.44
LSM7-204ENST00000587502 TSPY10P0CW01 314 aa36.56■■■■□ 3.44
LSM7-204ENST00000587502 ARHGEF5Q12774 1597 aa36.56■■■■□ 3.44
LSM7-204ENST00000587502 MYOM3Q5VTT5 1437 aa36.55■■■■□ 3.44
LSM7-204ENST00000587502 SETD1BQ9UPS6 1966 aaKnown RBP36.54■■■■□ 3.44
LSM7-204ENST00000587502 PPP6R1Q9UPN7 881 aa36.52■■■■□ 3.44
LSM7-204ENST00000587502 DHX29Q7Z478 1369 aaKnown RBP36.52■■■■□ 3.44
LSM7-204ENST00000587502 PREX1Q8TCU6 1659 aa36.5■■■■□ 3.43
LSM7-204ENST00000587502 C3P01024 1663 aa36.49■■■■□ 3.43
LSM7-204ENST00000587502 HSPA2P54652 639 aa36.48■■■■□ 3.43
LSM7-204ENST00000587502 GGT6Q6P531 493 aa36.47■■■■□ 3.43
LSM7-204ENST00000587502 UHRF1BP1Q6BDS2 1440 aa36.45■■■■□ 3.43
LSM7-204ENST00000587502 MROH2AA6NES4 1674 aa36.45■■■■□ 3.42
LSM7-204ENST00000587502 FBXO41Q8TF61 875 aa36.43■■■■□ 3.42
LSM7-204ENST00000587502 ZMYM3Q14202 1370 aa36.42■■■■□ 3.42
LSM7-204ENST00000587502 NPATQ14207 1427 aa36.37■■■■□ 3.41
LSM7-204ENST00000587502 MAST1Q9Y2H9 1570 aa36.36■■■■□ 3.41
LSM7-204ENST00000587502 KIF3BO15066 747 aa36.36■■■■□ 3.41
LSM7-204ENST00000587502 CLTCQ00610 1675 aaKnown RBP36.34■■■■□ 3.41
LSM7-204ENST00000587502 PTPN23Q9H3S7 1636 aa36.29■■■■□ 3.4
LSM7-204ENST00000587502 FAM135AQ9P2D6 1515 aa36.28■■■■□ 3.4
LSM7-204ENST00000587502 FGD6Q6ZV73 1430 aa36.27■■■■□ 3.4
LSM7-204ENST00000587502 DMRT2Q9Y5R5 561 aa36.24■■■■□ 3.39
LSM7-204ENST00000587502 PTPRKQ15262 1439 aa36.22■■■■□ 3.39
LSM7-204ENST00000587502 TCOF1Q13428 1488 aaKnown RBP36.22■■■■□ 3.39
LSM7-204ENST00000587502 SHANK2Q9UPX8 1470 aa36.22■■■■□ 3.39
LSM7-204ENST00000587502 WASHC2CQ9Y4E1 1318 aa36.21■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms