RNA–Protein interactions for RNA: ENST00000587376.5

ERCC2-210, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-210ENST00000587376 ZMYM4Q5VZL5 1548 aa24.79■■□□□ 1.56
ERCC2-210ENST00000587376 MAGI2Q86UL8 1455 aa24.78■■□□□ 1.56
ERCC2-210ENST00000587376 POGZQ7Z3K3 1410 aa24.77■■□□□ 1.56
ERCC2-210ENST00000587376 ZFYVE16Q7Z3T8 1539 aa24.76■■□□□ 1.55
ERCC2-210ENST00000587376 BCORL1Q5H9F3 1711 aa24.72■■□□□ 1.55
ERCC2-210ENST00000587376 ADAMTSL3P82987 1691 aa24.72■■□□□ 1.55
ERCC2-210ENST00000587376 ZNF518AQ6AHZ1 1483 aa24.71■■□□□ 1.55
ERCC2-210ENST00000587376 MYT1LQ9UL68 1186 aa24.71■■□□□ 1.55
ERCC2-210ENST00000587376 PREX2Q70Z35 1606 aa24.68■■□□□ 1.54
ERCC2-210ENST00000587376 YEATS2Q9ULM3 1422 aa24.68■■□□□ 1.54
ERCC2-210ENST00000587376 CDC42BPBQ9Y5S2 1711 aa24.67■■□□□ 1.54
ERCC2-210ENST00000587376 HECW2Q9P2P5 1572 aa24.67■■□□□ 1.54
ERCC2-210ENST00000587376 PTPRMP28827 1452 aa24.66■■□□□ 1.54
ERCC2-210ENST00000587376 CEP162Q5TB80 1403 aa24.66■■□□□ 1.54
ERCC2-210ENST00000587376 MADDQ8WXG6 1647 aa24.64■■□□□ 1.53
ERCC2-210ENST00000587376 MTUS2Q5JR59 1369 aa24.63■■□□□ 1.53
ERCC2-210ENST00000587376 ATP10AO60312 1499 aa24.62■■□□□ 1.53
ERCC2-210ENST00000587376 CDC42BPAQ5VT25 1732 aa24.61■■□□□ 1.53
ERCC2-210ENST00000587376 C9orf84Q5VXU9 1444 aa24.61■■□□□ 1.53
ERCC2-210ENST00000587376 AFAP1Q8N556 730 aa24.6■■□□□ 1.53
ERCC2-210ENST00000587376 KDM5CP41229 1560 aa24.59■■□□□ 1.53
ERCC2-210ENST00000587376 RIMS1Q86UR5 1692 aaKnown RBP24.59■■□□□ 1.53
ERCC2-210ENST00000587376 MLECQ14165 292 aa24.58■■□□□ 1.53
ERCC2-210ENST00000587376 ZNF777Q9ULD5 760 aaPredicted RBP24.58■■□□□ 1.53
ERCC2-210ENST00000587376 ABCC1P33527 1531 aa24.57■■□□□ 1.52
ERCC2-210ENST00000587376 CCNB3Q8WWL7 1395 aa24.56■■□□□ 1.52
ERCC2-210ENST00000587376 ITSN2Q9NZM3 1697 aa24.55■■□□□ 1.52
ERCC2-210ENST00000587376 CFDP1Q9UEE9 299 aaPredicted RBP24.53■■□□□ 1.52
ERCC2-210ENST00000587376 MLH3Q9UHC1 1453 aa24.52■■□□□ 1.52
ERCC2-210ENST00000587376 FER1L4A9Z1Z3 1794 aa24.52■■□□□ 1.52
ERCC2-210ENST00000587376 GPATCH8Q9UKJ3 1502 aaKnown RBP24.52■■□□□ 1.52
ERCC2-210ENST00000587376 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
ERCC2-210ENST00000587376 PLPPR3Q6T4P5 718 aa24.51■■□□□ 1.51
ERCC2-210ENST00000587376 SIGLEC1Q9BZZ2 1709 aa24.51■■□□□ 1.51
ERCC2-210ENST00000587376 TRAPPC8Q9Y2L5 1435 aa24.5■■□□□ 1.51
ERCC2-210ENST00000587376 PLEKHH2Q8IVE3 1493 aa24.5■■□□□ 1.51
ERCC2-210ENST00000587376 ARHGEF12Q9NZN5 1544 aa24.48■■□□□ 1.51
ERCC2-210ENST00000587376 DIP2CQ9Y2E4 1556 aa24.48■■□□□ 1.51
ERCC2-210ENST00000587376 SAMD9LQ8IVG5 1584 aa24.47■■□□□ 1.51
ERCC2-210ENST00000587376 LOC105371045A0A1W2PR82 267 aa24.47■■□□□ 1.51
ERCC2-210ENST00000587376 REREQ9P2R6 1566 aa24.46■■□□□ 1.51
ERCC2-210ENST00000587376 SYCP2Q9BX26 1530 aa24.45■■□□□ 1.51
ERCC2-210ENST00000587376 ESF1Q9H501 851 aaKnown RBP24.45■■□□□ 1.5
ERCC2-210ENST00000587376 ABCA6Q8N139 1617 aa24.45■■□□□ 1.5
ERCC2-210ENST00000587376 SPAG9O60271 1321 aaKnown RBP24.43■■□□□ 1.5
ERCC2-210ENST00000587376 HNRNPMP52272 730 aaKnown RBP eCLIP24.43■■□□□ 1.52e-7■■■■□ 22.5
ERCC2-210ENST00000587376 KIAA1107Q9UPP5 1409 aa24.43■■□□□ 1.5
ERCC2-210ENST00000587376 KIDINS220Q9ULH0 1771 aa24.4■■□□□ 1.5
ERCC2-210ENST00000587376 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
ERCC2-210ENST00000587376 SUPT6HQ7KZ85 1726 aaKnown RBP24.4■■□□□ 1.5
ERCC2-210ENST00000587376 TIAM1Q13009 1591 aa24.39■■□□□ 1.5
ERCC2-210ENST00000587376 AGLP35573 1532 aa24.37■■□□□ 1.49
ERCC2-210ENST00000587376 LMTK3Q96Q04 1460 aa24.37■■□□□ 1.49
ERCC2-210ENST00000587376 ATP7AQ04656 1500 aa24.35■■□□□ 1.49
ERCC2-210ENST00000587376 NCOA2Q15596 1464 aa24.32■■□□□ 1.48
ERCC2-210ENST00000587376 INO80Q9ULG1 1556 aaPredicted RBP24.3■■□□□ 1.48
ERCC2-210ENST00000587376 CEBPAP49715 358 aaPredicted RBP24.29■■□□□ 1.48
ERCC2-210ENST00000587376 APLP2Q06481 763 aa24.29■■□□□ 1.48
ERCC2-210ENST00000587376 CNTLNQ9NXG0 1405 aa24.28■■□□□ 1.48
ERCC2-210ENST00000587376 PREX1Q8TCU6 1659 aa24.28■■□□□ 1.48
ERCC2-210ENST00000587376 ZNF644Q9H582 1327 aaPredicted RBP24.28■■□□□ 1.48
ERCC2-210ENST00000587376 LRRC9Q6ZRR7 1453 aa24.26■■□□□ 1.47
ERCC2-210ENST00000587376 HSPA2P54652 639 aa24.26■■□□□ 1.47
ERCC2-210ENST00000587376 RSPH4AQ5TD94 716 aa24.26■■□□□ 1.47
ERCC2-210ENST00000587376 A2MP01023 1474 aa24.26■■□□□ 1.47
ERCC2-210ENST00000587376 MAP3K1Q13233 1512 aa24.25■■□□□ 1.47
ERCC2-210ENST00000587376 ADGBQ8N7X0 1667 aa24.24■■□□□ 1.47
ERCC2-210ENST00000587376 RTEL1-TNFRSF6BF6WH68 1400 aa24.23■■□□□ 1.47
ERCC2-210ENST00000587376 UHRF1BP1Q6BDS2 1440 aa24.23■■□□□ 1.47
ERCC2-210ENST00000587376 CAMSAP2Q08AD1 1489 aa24.23■■□□□ 1.47
ERCC2-210ENST00000587376 CCDC141Q6ZP82 1450 aa24.22■■□□□ 1.47
ERCC2-210ENST00000587376 MBD5Q9P267 1494 aa24.22■■□□□ 1.47
ERCC2-210ENST00000587376 SETD1BQ9UPS6 1966 aaKnown RBP24.22■■□□□ 1.47
ERCC2-210ENST00000587376 C3P01024 1663 aa24.21■■□□□ 1.47
ERCC2-210ENST00000587376 PLXNC1O60486 1568 aa24.2■■□□□ 1.46
ERCC2-210ENST00000587376 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
ERCC2-210ENST00000587376 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
ERCC2-210ENST00000587376 GGT6Q6P531 493 aa24.18■■□□□ 1.46
ERCC2-210ENST00000587376 ILDR1Q86SU0 546 aaPredicted RBP24.18■■□□□ 1.46
ERCC2-210ENST00000587376 MROH2AA6NES4 1674 aa24.18■■□□□ 1.46
ERCC2-210ENST00000587376 PPP6R1Q9UPN7 881 aa24.15■■□□□ 1.46
ERCC2-210ENST00000587376 KANK4Q5T7N3 995 aaPredicted RBP24.14■■□□□ 1.45
ERCC2-210ENST00000587376 ARHGEF5Q12774 1597 aa24.13■■□□□ 1.45
ERCC2-210ENST00000587376 DHX29Q7Z478 1369 aaKnown RBP24.13■■□□□ 1.45
ERCC2-210ENST00000587376 DMRT2Q9Y5R5 561 aa24.12■■□□□ 1.45
ERCC2-210ENST00000587376 ZMYM3Q14202 1370 aa24.12■■□□□ 1.45
ERCC2-210ENST00000587376 CLTCQ00610 1675 aaKnown RBP24.11■■□□□ 1.45
ERCC2-210ENST00000587376 NPATQ14207 1427 aa24.1■■□□□ 1.45
ERCC2-210ENST00000587376 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
ERCC2-210ENST00000587376 MIA2Q96PC5 1412 aa24.1■■□□□ 1.45
ERCC2-210ENST00000587376 KIF3BO15066 747 aa24.07■■□□□ 1.44
ERCC2-210ENST00000587376 FBXO41Q8TF61 875 aa24.03■■□□□ 1.44
ERCC2-210ENST00000587376 FAM135AQ9P2D6 1515 aa24■■□□□ 1.43
ERCC2-210ENST00000587376 MAST1Q9Y2H9 1570 aa24■■□□□ 1.43
ERCC2-210ENST00000587376 WASHC2CQ9Y4E1 1318 aa23.99■■□□□ 1.43
ERCC2-210ENST00000587376 KDM5DQ9BY66 1539 aa23.99■■□□□ 1.43
ERCC2-210ENST00000587376 STRCQ7RTU9 1775 aa23.97■■□□□ 1.43
ERCC2-210ENST00000587376 PTPRKQ15262 1439 aa23.96■■□□□ 1.43
ERCC2-210ENST00000587376 MYO3AQ8NEV4 1616 aa23.95■■□□□ 1.42
ERCC2-210ENST00000587376 PTPN23Q9H3S7 1636 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms