RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 DENND4BO75064 1496 aaPredicted RBP26.67■■□□□ 1.86
VAT1-204ENST00000587147 SUPT6HQ7KZ85 1726 aaKnown RBP26.66■■□□□ 1.86
VAT1-204ENST00000587147 ADGRL1O94910 1474 aa26.66■■□□□ 1.86
VAT1-204ENST00000587147 LRRC9Q6ZRR7 1453 aa26.66■■□□□ 1.86
VAT1-204ENST00000587147 RICTORQ6R327 1708 aa26.65■■□□□ 1.86
VAT1-204ENST00000587147 GPATCH8Q9UKJ3 1502 aaKnown RBP26.64■■□□□ 1.85
VAT1-204ENST00000587147 FRMPD1Q5SYB0 1578 aa26.63■■□□□ 1.85
VAT1-204ENST00000587147 ITSN2Q9NZM3 1697 aa26.63■■□□□ 1.85
VAT1-204ENST00000587147 CCNB3Q8WWL7 1395 aa26.62■■□□□ 1.85
VAT1-204ENST00000587147 ZMYM4Q5VZL5 1548 aa26.6■■□□□ 1.85
VAT1-204ENST00000587147 POGZQ7Z3K3 1410 aa26.59■■□□□ 1.85
VAT1-204ENST00000587147 SCAPERQ9BY12 1400 aa26.59■■□□□ 1.85
VAT1-204ENST00000587147 APLP2Q06481 763 aa26.59■■□□□ 1.85
VAT1-204ENST00000587147 NCOA2Q15596 1464 aa26.58■■□□□ 1.85
VAT1-204ENST00000587147 MAGI2Q86UL8 1455 aa26.57■■□□□ 1.84
VAT1-204ENST00000587147 ABCC1P33527 1531 aa26.57■■□□□ 1.84
VAT1-204ENST00000587147 RAPGEF3O95398 923 aa26.56■■□□□ 1.84
VAT1-204ENST00000587147 ZNF518AQ6AHZ1 1483 aa26.55■■□□□ 1.84
VAT1-204ENST00000587147 PLEKHH2Q8IVE3 1493 aa26.55■■□□□ 1.84
VAT1-204ENST00000587147 CFDP1Q9UEE9 299 aaPredicted RBP26.52■■□□□ 1.84
VAT1-204ENST00000587147 KIAA1107Q9UPP5 1409 aa26.52■■□□□ 1.84
VAT1-204ENST00000587147 KDM5CP41229 1560 aa26.51■■□□□ 1.83
VAT1-204ENST00000587147 SAMD9LQ8IVG5 1584 aa26.51■■□□□ 1.83
VAT1-204ENST00000587147 ARHGEF40Q8TER5 1519 aa26.49■■□□□ 1.83
VAT1-204ENST00000587147 KANK4Q5T7N3 995 aaPredicted RBP26.47■■□□□ 1.83
VAT1-204ENST00000587147 ZFYVE16Q7Z3T8 1539 aa26.45■■□□□ 1.83
VAT1-204ENST00000587147 ARHGEF12Q9NZN5 1544 aa26.44■■□□□ 1.82
VAT1-204ENST00000587147 SYCP2Q9BX26 1530 aa26.43■■□□□ 1.82
VAT1-204ENST00000587147 MLH3Q9UHC1 1453 aa26.42■■□□□ 1.82
VAT1-204ENST00000587147 HECW2Q9P2P5 1572 aa26.42■■□□□ 1.82
VAT1-204ENST00000587147 MIA2Q96PC5 1412 aa26.41■■□□□ 1.82
VAT1-204ENST00000587147 MYOM3Q5VTT5 1437 aa26.4■■□□□ 1.82
VAT1-204ENST00000587147 TRAPPC8Q9Y2L5 1435 aa26.39■■□□□ 1.82
VAT1-204ENST00000587147 ZNF777Q9ULD5 760 aaPredicted RBP26.39■■□□□ 1.82
VAT1-204ENST00000587147 AFAP1Q8N556 730 aa26.37■■□□□ 1.81
VAT1-204ENST00000587147 CAMSAP2Q08AD1 1489 aa26.36■■□□□ 1.81
VAT1-204ENST00000587147 RSPH4AQ5TD94 716 aa26.35■■□□□ 1.81
VAT1-204ENST00000587147 MBD5Q9P267 1494 aa26.35■■□□□ 1.81
VAT1-204ENST00000587147 YEATS2Q9ULM3 1422 aa26.34■■□□□ 1.81
VAT1-204ENST00000587147 ATP10AO60312 1499 aa26.34■■□□□ 1.81
VAT1-204ENST00000587147 REREQ9P2R6 1566 aa26.33■■□□□ 1.81
VAT1-204ENST00000587147 ARHGEF5Q12774 1597 aa26.33■■□□□ 1.8
VAT1-204ENST00000587147 C9orf84Q5VXU9 1444 aa26.31■■□□□ 1.8
VAT1-204ENST00000587147 KIDINS220Q9ULH0 1771 aa26.3■■□□□ 1.8
VAT1-204ENST00000587147 HNRNPMP52272 730 aaKnown RBP eCLIP26.3■■□□□ 1.8
VAT1-204ENST00000587147 INO80Q9ULG1 1556 aaPredicted RBP26.29■■□□□ 1.8
VAT1-204ENST00000587147 DIP2CQ9Y2E4 1556 aa26.29■■□□□ 1.8
VAT1-204ENST00000587147 ZNF644Q9H582 1327 aaPredicted RBP26.29■■□□□ 1.8
VAT1-204ENST00000587147 CCDC141Q6ZP82 1450 aa26.29■■□□□ 1.8
VAT1-204ENST00000587147 SPAG9O60271 1321 aaKnown RBP26.27■■□□□ 1.8
VAT1-204ENST00000587147 RTEL1-TNFRSF6BF6WH68 1400 aa26.27■■□□□ 1.8
VAT1-204ENST00000587147 ATP7AQ04656 1500 aa26.27■■□□□ 1.8
VAT1-204ENST00000587147 ABCA6Q8N139 1617 aa26.27■■□□□ 1.8
VAT1-204ENST00000587147 KDM4FA0A1W2PPD8 638 aa26.25■■□□□ 1.79
VAT1-204ENST00000587147 BCORL1Q5H9F3 1711 aa26.25■■□□□ 1.79
VAT1-204ENST00000587147 FGD6Q6ZV73 1430 aa26.24■■□□□ 1.79
VAT1-204ENST00000587147 TCOF1Q13428 1488 aaKnown RBP26.23■■□□□ 1.79
VAT1-204ENST00000587147 PTPN23Q9H3S7 1636 aa26.22■■□□□ 1.79
VAT1-204ENST00000587147 AGLP35573 1532 aa26.22■■□□□ 1.79
VAT1-204ENST00000587147 MYT1LQ9UL68 1186 aa26.21■■□□□ 1.79
VAT1-204ENST00000587147 ADAMTSL3P82987 1691 aa26.21■■□□□ 1.79
VAT1-204ENST00000587147 MAST1Q9Y2H9 1570 aa26.19■■□□□ 1.78
VAT1-204ENST00000587147 ADGBQ8N7X0 1667 aa26.19■■□□□ 1.78
VAT1-204ENST00000587147 SIGLEC1Q9BZZ2 1709 aa26.18■■□□□ 1.78
VAT1-204ENST00000587147 ARID4BQ4LE39 1312 aaPredicted RBP26.17■■□□□ 1.78
VAT1-204ENST00000587147 TSPY4P0CV99 314 aa26.15■■□□□ 1.78
VAT1-204ENST00000587147 TSPY10P0CW01 314 aa26.15■■□□□ 1.78
VAT1-204ENST00000587147 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
VAT1-204ENST00000587147 PLXNC1O60486 1568 aa26.15■■□□□ 1.78
VAT1-204ENST00000587147 SHANK2Q9UPX8 1470 aa26.14■■□□□ 1.78
VAT1-204ENST00000587147 DNMT1P26358 1616 aaKnown RBP26.12■■□□□ 1.77
VAT1-204ENST00000587147 A2MP01023 1474 aa26.11■■□□□ 1.77
VAT1-204ENST00000587147 CROCC2H7BZ55 1655 aa26.11■■□□□ 1.77
VAT1-204ENST00000587147 MADDQ8WXG6 1647 aa26.08■■□□□ 1.77
VAT1-204ENST00000587147 ABCC5O15440 1437 aa26.05■■□□□ 1.76
VAT1-204ENST00000587147 DAPK1P53355 1430 aa26.05■■□□□ 1.76
VAT1-204ENST00000587147 DHX29Q7Z478 1369 aaKnown RBP26.05■■□□□ 1.76
VAT1-204ENST00000587147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.05■■□□□ 1.76
VAT1-204ENST00000587147 FER1L4A9Z1Z3 1794 aa26.05■■□□□ 1.76
VAT1-204ENST00000587147 PTPRMP28827 1452 aa26.02■■□□□ 1.76
VAT1-204ENST00000587147 RIMS1Q86UR5 1692 aaKnown RBP25.99■■□□□ 1.75
VAT1-204ENST00000587147 PPP6R1Q9UPN7 881 aa25.98■■□□□ 1.75
VAT1-204ENST00000587147 FAM135AQ9P2D6 1515 aa25.98■■□□□ 1.75
VAT1-204ENST00000587147 CNTLNQ9NXG0 1405 aa25.97■■□□□ 1.75
VAT1-204ENST00000587147 EIF2AK4Q9P2K8 1649 aaKnown RBP25.97■■□□□ 1.75
VAT1-204ENST00000587147 DUOX2Q9NRD8 1548 aa25.97■■□□□ 1.75
VAT1-204ENST00000587147 ADGRL2O95490 1459 aa25.96■■□□□ 1.75
VAT1-204ENST00000587147 MLECQ14165 292 aa25.95■■□□□ 1.74
VAT1-204ENST00000587147 FAM50AQ14320 339 aaKnown RBP25.94■■□□□ 1.74
VAT1-204ENST00000587147 RRBP1Q9P2E9 1410 aaKnown RBP25.94■■□□□ 1.74
VAT1-204ENST00000587147 ANKRD30AQ9BXX3 1397 aa25.93■■□□□ 1.74
VAT1-204ENST00000587147 MROH2AA6NES4 1674 aa25.92■■□□□ 1.74
VAT1-204ENST00000587147 ERBINQ96RT1 1412 aa25.9■■□□□ 1.74
VAT1-204ENST00000587147 KIF15Q9NS87 1388 aa25.9■■□□□ 1.74
VAT1-204ENST00000587147 NCOA1Q15788 1441 aa25.89■■□□□ 1.74
VAT1-204ENST00000587147 RNF17Q9BXT8 1623 aaKnown RBP25.89■■□□□ 1.74
VAT1-204ENST00000587147 PPARGC1BQ86YN6 1023 aaKnown RBP25.89■■□□□ 1.74
VAT1-204ENST00000587147 ESF1Q9H501 851 aaKnown RBP25.89■■□□□ 1.74
VAT1-204ENST00000587147 ROCK1Q13464 1354 aa25.85■■□□□ 1.73
VAT1-204ENST00000587147 KIF3BO15066 747 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms