RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-209	ENST00000586555	PCF11	O94913	1555 aa	Known RBP	33.08	■■■□□ 2.89
CIRBP-209	ENST00000586555	MAGI2	Q86UL8	1455 aa		33.07	■■■□□ 2.88
CIRBP-209	ENST00000586555	KIF14	Q15058	1648 aa		33.07	■■■□□ 2.88
CIRBP-209	ENST00000586555	EFCAB2	Q5VUJ9	269 aa		33.07	■■■□□ 2.88
CIRBP-209	ENST00000586555	FYCO1	Q9BQS8	1478 aa		33.06	■■■□□ 2.88
CIRBP-209	ENST00000586555	CEP162	Q5TB80	1403 aa		33.05	■■■□□ 2.88
CIRBP-209	ENST00000586555	YEATS2	Q9ULM3	1422 aa		33.04	■■■□□ 2.88
CIRBP-209	ENST00000586555	POGZ	Q7Z3K3	1410 aa		33.03	■■■□□ 2.88
CIRBP-209	ENST00000586555	ZFYVE16	Q7Z3T8	1539 aa		33.02	■■■□□ 2.88
CIRBP-209	ENST00000586555	MADD	Q8WXG6	1647 aa		33.02	■■■□□ 2.88
CIRBP-209	ENST00000586555	LOC105371045	A0A1W2PR82	267 aa		33.02	■■■□□ 2.88
CIRBP-209	ENST00000586555	SIGLEC1	Q9BZZ2	1709 aa		32.97	■■■□□ 2.87
CIRBP-209	ENST00000586555	ARHGAP5	Q13017	1502 aa		32.92	■■■□□ 2.86
CIRBP-209	ENST00000586555	CDC42BPB	Q9Y5S2	1711 aa		32.91	■■■□□ 2.86
CIRBP-209	ENST00000586555	RIMS1	Q86UR5	1692 aa	Known RBP	32.9	■■■□□ 2.86
CIRBP-209	ENST00000586555	ATP10A	O60312	1499 aa		32.88	■■■□□ 2.85
CIRBP-209	ENST00000586555	ZNF518A	Q6AHZ1	1483 aa		32.86	■■■□□ 2.85
CIRBP-209	ENST00000586555	KDM5C	P41229	1560 aa		32.85	■■■□□ 2.85
CIRBP-209	ENST00000586555	AFAP1	Q8N556	730 aa		32.85	■■■□□ 2.85
CIRBP-209	ENST00000586555	ILDR1	Q86SU0	546 aa	Predicted RBP	32.84	■■■□□ 2.85
CIRBP-209	ENST00000586555	PREX2	Q70Z35	1606 aa		32.83	■■■□□ 2.85
CIRBP-209	ENST00000586555	C9orf84	Q5VXU9	1444 aa		32.82	■■■□□ 2.84
CIRBP-209	ENST00000586555	MLEC	Q14165	292 aa		32.79	■■■□□ 2.84
CIRBP-209	ENST00000586555	LMTK3	Q96Q04	1460 aa		32.78	■■■□□ 2.84
CIRBP-209	ENST00000586555	CDC42BPA	Q5VT25	1732 aa		32.76	■■■□□ 2.83
CIRBP-209	ENST00000586555	ARHGEF12	Q9NZN5	1544 aa		32.76	■■■□□ 2.83
CIRBP-209	ENST00000586555	FER1L4	A9Z1Z3	1794 aa		32.75	■■■□□ 2.83
CIRBP-209	ENST00000586555	MLH3	Q9UHC1	1453 aa		32.74	■■■□□ 2.83
CIRBP-209	ENST00000586555	MTUS2	Q5JR59	1369 aa		32.74	■■■□□ 2.83
CIRBP-209	ENST00000586555	ABCC1	P33527	1531 aa		32.73	■■■□□ 2.83
CIRBP-209	ENST00000586555	TRAPPC8	Q9Y2L5	1435 aa		32.72	■■■□□ 2.83
CIRBP-209	ENST00000586555	DIP2C	Q9Y2E4	1556 aa		32.7	■■■□□ 2.82
CIRBP-209	ENST00000586555	ITSN2	Q9NZM3	1697 aa		32.69	■■■□□ 2.82
CIRBP-209	ENST00000586555	VPS8	Q8N3P4	1428 aa		32.68	■■■□□ 2.82
CIRBP-209	ENST00000586555	RERE	Q9P2R6	1566 aa		32.68	■■■□□ 2.82
CIRBP-209	ENST00000586555	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.67	■■■□□ 2.82
CIRBP-209	ENST00000586555	PLPPR3	Q6T4P5	718 aa		32.65	■■■□□ 2.82
CIRBP-209	ENST00000586555	MYT1L	Q9UL68	1186 aa		32.65	■■■□□ 2.82
CIRBP-209	ENST00000586555	ABCA6	Q8N139	1617 aa		32.65	■■■□□ 2.82
CIRBP-209	ENST00000586555	EHBP1L1	Q8N3D4	1523 aa		32.61	■■■□□ 2.81
CIRBP-209	ENST00000586555	KIDINS220	Q9ULH0	1771 aa		32.6	■■■□□ 2.81
CIRBP-209	ENST00000586555	SAMD9L	Q8IVG5	1584 aa		32.59	■■■□□ 2.81
CIRBP-209	ENST00000586555	CCNB3	Q8WWL7	1395 aa		32.58	■■■□□ 2.81
CIRBP-209	ENST00000586555	AGL	P35573	1532 aa		32.58	■■■□□ 2.81
CIRBP-209	ENST00000586555	HSPA2	P54652	639 aa		32.58	■■■□□ 2.81
CIRBP-209	ENST00000586555	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.57	■■■□□ 2.8
CIRBP-209	ENST00000586555	CEBPA	P49715	358 aa	Predicted RBP	32.54	■■■□□ 2.8
CIRBP-209	ENST00000586555	SETD1B	Q9UPS6	1966 aa	Known RBP	32.53	■■■□□ 2.8
CIRBP-209	ENST00000586555	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.53	■■■□□ 2.8
CIRBP-209	ENST00000586555	TIAM1	Q13009	1591 aa		32.53	■■■□□ 2.8
CIRBP-209	ENST00000586555	KIAA1107	Q9UPP5	1409 aa		32.52	■■■□□ 2.8
CIRBP-209	ENST00000586555	SYCP2	Q9BX26	1530 aa		32.51	■■■□□ 2.8
CIRBP-209	ENST00000586555	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.51	■■■□□ 2.79
CIRBP-209	ENST00000586555	PLEKHH2	Q8IVE3	1493 aa		32.48	■■■□□ 2.79
CIRBP-209	ENST00000586555	APLP2	Q06481	763 aa		32.47	■■■□□ 2.79
CIRBP-209	ENST00000586555	PREX1	Q8TCU6	1659 aa		32.46	■■■□□ 2.79
CIRBP-209	ENST00000586555	SPAG9	O60271	1321 aa	Known RBP	32.46	■■■□□ 2.79
CIRBP-209	ENST00000586555	MAP3K1	Q13233	1512 aa		32.46	■■■□□ 2.79
CIRBP-209	ENST00000586555	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.46	■■■□□ 2.79
CIRBP-209	ENST00000586555	FBXO41	Q8TF61	875 aa		32.41	■■■□□ 2.78
CIRBP-209	ENST00000586555	LRRC9	Q6ZRR7	1453 aa		32.41	■■■□□ 2.78
CIRBP-209	ENST00000586555	C3	P01024	1663 aa		32.4	■■■□□ 2.78
CIRBP-209	ENST00000586555	NCOA2	Q15596	1464 aa		32.39	■■■□□ 2.78
CIRBP-209	ENST00000586555	ATP7A	Q04656	1500 aa		32.38	■■■□□ 2.77
CIRBP-209	ENST00000586555	INO80	Q9ULG1	1556 aa	Predicted RBP	32.37	■■■□□ 2.77
CIRBP-209	ENST00000586555	ZNF644	Q9H582	1327 aa	Predicted RBP	32.36	■■■□□ 2.77
CIRBP-209	ENST00000586555	ESF1	Q9H501	851 aa	Known RBP	32.36	■■■□□ 2.77
CIRBP-209	ENST00000586555	CNTLN	Q9NXG0	1405 aa		32.35	■■■□□ 2.77
CIRBP-209	ENST00000586555	MBD5	Q9P267	1494 aa		32.34	■■■□□ 2.77
CIRBP-209	ENST00000586555	UHRF1BP1	Q6BDS2	1440 aa		32.34	■■■□□ 2.77
CIRBP-209	ENST00000586555	PLXNC1	O60486	1568 aa		32.32	■■■□□ 2.76
CIRBP-209	ENST00000586555	A2M	P01023	1474 aa		32.3	■■■□□ 2.76
CIRBP-209	ENST00000586555	KANK4	Q5T7N3	995 aa	Predicted RBP	32.3	■■■□□ 2.76
CIRBP-209	ENST00000586555	STRC	Q7RTU9	1775 aa		32.27	■■■□□ 2.76
CIRBP-209	ENST00000586555	MROH2A	A6NES4	1674 aa		32.27	■■■□□ 2.76
CIRBP-209	ENST00000586555	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.25	■■■□□ 2.75
CIRBP-209	ENST00000586555	ZMYM3	Q14202	1370 aa		32.23	■■■□□ 2.75
CIRBP-209	ENST00000586555	ADGB	Q8N7X0	1667 aa		32.23	■■■□□ 2.75
CIRBP-209	ENST00000586555	RSPH4A	Q5TD94	716 aa		32.22	■■■□□ 2.75
CIRBP-209	ENST00000586555	DMRT2	Q9Y5R5	561 aa		32.2	■■■□□ 2.75
CIRBP-209	ENST00000586555	NPAT	Q14207	1427 aa		32.19	■■■□□ 2.74
CIRBP-209	ENST00000586555	CAMSAP2	Q08AD1	1489 aa		32.17	■■■□□ 2.74
CIRBP-209	ENST00000586555	CERK	Q8TCT0	537 aa		32.17	■■■□□ 2.74
CIRBP-209	ENST00000586555	PPP6R1	Q9UPN7	881 aa		32.17	■■■□□ 2.74
CIRBP-209	ENST00000586555	GGT6	Q6P531	493 aa		32.16	■■■□□ 2.74
CIRBP-209	ENST00000586555	CLTC	Q00610	1675 aa	Known RBP	32.15	■■■□□ 2.74
CIRBP-209	ENST00000586555	DHX29	Q7Z478	1369 aa	Known RBP	32.14	■■■□□ 2.74
CIRBP-209	ENST00000586555	MYOM3	Q5VTT5	1437 aa		32.13	■■■□□ 2.73
CIRBP-209	ENST00000586555	CCDC141	Q6ZP82	1450 aa		32.13	■■■□□ 2.73
CIRBP-209	ENST00000586555	MIA2	Q96PC5	1412 aa		32.12	■■■□□ 2.73
CIRBP-209	ENST00000586555	PTPRT	O14522	1441 aa		32.1	■■■□□ 2.73
CIRBP-209	ENST00000586555	TSPY4	P0CV99	314 aa		32.08	■■■□□ 2.73
CIRBP-209	ENST00000586555	TSPY10	P0CW01	314 aa		32.08	■■■□□ 2.73
CIRBP-209	ENST00000586555	PTPRK	Q15262	1439 aa		32.08	■■■□□ 2.73
CIRBP-209	ENST00000586555	ARHGEF5	Q12774	1597 aa		32.07	■■■□□ 2.72
CIRBP-209	ENST00000586555	NCOA1	Q15788	1441 aa		32.06	■■■□□ 2.72
CIRBP-209	ENST00000586555	KIF3B	O15066	747 aa		32	■■■□□ 2.71
CIRBP-209	ENST00000586555	CAMSAP1	Q5T5Y3	1602 aa		31.99	■■■□□ 2.71
CIRBP-209	ENST00000586555	ZNF142	P52746	1687 aa	Predicted RBP	31.98	■■■□□ 2.71
CIRBP-209	ENST00000586555	MYO3A	Q8NEV4	1616 aa		31.97	■■■□□ 2.71

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