RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 POGZQ7Z3K3 1410 aa28.68■■■□□ 2.18
SRSF1-209ENST00000585096 MAGI2Q86UL8 1455 aa28.66■■■□□ 2.18
SRSF1-209ENST00000585096 ZMYM4Q5VZL5 1548 aa28.65■■■□□ 2.18
SRSF1-209ENST00000585096 ARHGEF40Q8TER5 1519 aa28.64■■■□□ 2.18
SRSF1-209ENST00000585096 ZFYVE16Q7Z3T8 1539 aa28.61■■■□□ 2.17
SRSF1-209ENST00000585096 LOC105371045A0A1W2PR82 267 aa28.6■■■□□ 2.17
SRSF1-209ENST00000585096 YEATS2Q9ULM3 1422 aa28.6■■■□□ 2.17
SRSF1-209ENST00000585096 ZNF518AQ6AHZ1 1483 aa28.57■■■□□ 2.16
SRSF1-209ENST00000585096 AFAP1Q8N556 730 aa28.56■■■□□ 2.16
SRSF1-209ENST00000585096 MTUS2Q5JR59 1369 aa28.55■■■□□ 2.16
SRSF1-209ENST00000585096 PREX2Q70Z35 1606 aa28.52■■■□□ 2.16
SRSF1-209ENST00000585096 MYT1LQ9UL68 1186 aa28.52■■■□□ 2.16
SRSF1-209ENST00000585096 ADAMTSL3P82987 1691 aa28.51■■■□□ 2.16
SRSF1-209ENST00000585096 ATP10AO60312 1499 aa28.5■■■□□ 2.15
SRSF1-209ENST00000585096 BCORL1Q5H9F3 1711 aa28.49■■■□□ 2.15
SRSF1-209ENST00000585096 CDC42BPBQ9Y5S2 1711 aa28.49■■■□□ 2.15
SRSF1-209ENST00000585096 PTPRMP28827 1452 aa28.49■■■□□ 2.15
SRSF1-209ENST00000585096 ZNF777Q9ULD5 760 aaPredicted RBP28.49■■■□□ 2.15
SRSF1-209ENST00000585096 GPATCH8Q9UKJ3 1502 aaKnown RBP28.48■■■□□ 2.15
SRSF1-209ENST00000585096 CCNB3Q8WWL7 1395 aa28.48■■■□□ 2.15
SRSF1-209ENST00000585096 C9orf84Q5VXU9 1444 aa28.46■■■□□ 2.15
SRSF1-209ENST00000585096 CFDP1Q9UEE9 299 aaPredicted RBP28.46■■■□□ 2.15
SRSF1-209ENST00000585096 KDM5CP41229 1560 aa28.45■■■□□ 2.15
SRSF1-209ENST00000585096 ABCC1P33527 1531 aa28.45■■■□□ 2.15
SRSF1-209ENST00000585096 TRAPPC8Q9Y2L5 1435 aa28.43■■■□□ 2.14
SRSF1-209ENST00000585096 ARHGEF12Q9NZN5 1544 aa28.43■■■□□ 2.14
SRSF1-209ENST00000585096 MLECQ14165 292 aa28.43■■■□□ 2.14
SRSF1-209ENST00000585096 MLH3Q9UHC1 1453 aa28.42■■■□□ 2.14
SRSF1-209ENST00000585096 CDC42BPAQ5VT25 1732 aa28.41■■■□□ 2.14
SRSF1-209ENST00000585096 MADDQ8WXG6 1647 aa28.41■■■□□ 2.14
SRSF1-209ENST00000585096 EHBP1L1Q8N3D4 1523 aa28.4■■■□□ 2.14
SRSF1-209ENST00000585096 HECW2Q9P2P5 1572 aa28.39■■■□□ 2.14
SRSF1-209ENST00000585096 VPS8Q8N3P4 1428 aa28.38■■■□□ 2.13
SRSF1-209ENST00000585096 PLEKHH2Q8IVE3 1493 aa28.36■■■□□ 2.13
SRSF1-209ENST00000585096 HNRNPMP52272 730 aaKnown RBP eCLIP28.36■■■□□ 2.13
SRSF1-209ENST00000585096 KIAA1107Q9UPP5 1409 aa28.35■■■□□ 2.13
SRSF1-209ENST00000585096 SAMD9LQ8IVG5 1584 aa28.34■■■□□ 2.13
SRSF1-209ENST00000585096 ITSN2Q9NZM3 1697 aa28.34■■■□□ 2.13
SRSF1-209ENST00000585096 SIGLEC1Q9BZZ2 1709 aa28.34■■■□□ 2.13
SRSF1-209ENST00000585096 DIP2CQ9Y2E4 1556 aa28.32■■■□□ 2.12
SRSF1-209ENST00000585096 SPAG9O60271 1321 aaKnown RBP28.31■■■□□ 2.12
SRSF1-209ENST00000585096 SYCP2Q9BX26 1530 aa28.31■■■□□ 2.12
SRSF1-209ENST00000585096 RIMS1Q86UR5 1692 aaKnown RBP28.29■■■□□ 2.12
SRSF1-209ENST00000585096 REREQ9P2R6 1566 aa28.28■■■□□ 2.12
SRSF1-209ENST00000585096 PLPPR3Q6T4P5 718 aa28.28■■■□□ 2.12
SRSF1-209ENST00000585096 TIAM1Q13009 1591 aa28.28■■■□□ 2.12
SRSF1-209ENST00000585096 ABCA6Q8N139 1617 aa28.25■■■□□ 2.11
SRSF1-209ENST00000585096 NCOA2Q15596 1464 aa28.25■■■□□ 2.11
SRSF1-209ENST00000585096 ZNF644Q9H582 1327 aaPredicted RBP28.24■■■□□ 2.11
SRSF1-209ENST00000585096 AGLP35573 1532 aa28.23■■■□□ 2.11
SRSF1-209ENST00000585096 KIDINS220Q9ULH0 1771 aa28.21■■■□□ 2.11
SRSF1-209ENST00000585096 LRRC9Q6ZRR7 1453 aa28.21■■■□□ 2.11
SRSF1-209ENST00000585096 SUPT6HQ7KZ85 1726 aaKnown RBP28.2■■■□□ 2.1
SRSF1-209ENST00000585096 ESF1Q9H501 851 aaKnown RBP28.19■■■□□ 2.1
SRSF1-209ENST00000585096 FER1L4A9Z1Z3 1794 aa28.19■■■□□ 2.1
SRSF1-209ENST00000585096 MAP3K1Q13233 1512 aa28.18■■■□□ 2.1
SRSF1-209ENST00000585096 MBD5Q9P267 1494 aa28.16■■■□□ 2.1
SRSF1-209ENST00000585096 ATP7AQ04656 1500 aa28.16■■■□□ 2.1
SRSF1-209ENST00000585096 APLP2Q06481 763 aa28.15■■■□□ 2.1
SRSF1-209ENST00000585096 RSPH4AQ5TD94 716 aa28.15■■■□□ 2.1
SRSF1-209ENST00000585096 LMTK3Q96Q04 1460 aa28.15■■■□□ 2.1
SRSF1-209ENST00000585096 KANK4Q5T7N3 995 aaPredicted RBP28.14■■■□□ 2.1
SRSF1-209ENST00000585096 CEBPAP49715 358 aaPredicted RBP28.13■■■□□ 2.09
SRSF1-209ENST00000585096 INO80Q9ULG1 1556 aaPredicted RBP28.11■■■□□ 2.09
SRSF1-209ENST00000585096 A2MP01023 1474 aa28.1■■■□□ 2.09
SRSF1-209ENST00000585096 RTEL1-TNFRSF6BF6WH68 1400 aa28.09■■■□□ 2.09
SRSF1-209ENST00000585096 CAMSAP2Q08AD1 1489 aa28.09■■■□□ 2.09
SRSF1-209ENST00000585096 CNTLNQ9NXG0 1405 aa28.07■■■□□ 2.08
SRSF1-209ENST00000585096 CCDC141Q6ZP82 1450 aa28.07■■■□□ 2.08
SRSF1-209ENST00000585096 HSPA2P54652 639 aa28.05■■■□□ 2.08
SRSF1-209ENST00000585096 TSPY4P0CV99 314 aa28.03■■■□□ 2.08
SRSF1-209ENST00000585096 TSPY10P0CW01 314 aa28.03■■■□□ 2.08
SRSF1-209ENST00000585096 PLXNC1O60486 1568 aa28.02■■■□□ 2.08
SRSF1-209ENST00000585096 GGT6Q6P531 493 aa28■■■□□ 2.07
SRSF1-209ENST00000585096 MYOM3Q5VTT5 1437 aa28■■■□□ 2.07
SRSF1-209ENST00000585096 MIA2Q96PC5 1412 aa28■■■□□ 2.07
SRSF1-209ENST00000585096 DHX29Q7Z478 1369 aaKnown RBP27.99■■■□□ 2.07
SRSF1-209ENST00000585096 PPP6R1Q9UPN7 881 aa27.98■■■□□ 2.07
SRSF1-209ENST00000585096 ARHGEF5Q12774 1597 aa27.96■■■□□ 2.07
SRSF1-209ENST00000585096 UHRF1BP1Q6BDS2 1440 aa27.96■■■□□ 2.07
SRSF1-209ENST00000585096 ADGBQ8N7X0 1667 aa27.96■■■□□ 2.07
SRSF1-209ENST00000585096 ZMYM3Q14202 1370 aa27.95■■■□□ 2.06
SRSF1-209ENST00000585096 PREX1Q8TCU6 1659 aa27.91■■■□□ 2.06
SRSF1-209ENST00000585096 C3P01024 1663 aa27.91■■■□□ 2.06
SRSF1-209ENST00000585096 KIF3BO15066 747 aa27.9■■■□□ 2.06
SRSF1-209ENST00000585096 NPATQ14207 1427 aa27.88■■■□□ 2.05
SRSF1-209ENST00000585096 MROH2AA6NES4 1674 aa27.85■■■□□ 2.05
SRSF1-209ENST00000585096 ILDR1Q86SU0 546 aaPredicted RBP27.84■■■□□ 2.05
SRSF1-209ENST00000585096 SETD1BQ9UPS6 1966 aaKnown RBP27.83■■■□□ 2.05
SRSF1-209ENST00000585096 DMRT2Q9Y5R5 561 aa27.81■■■□□ 2.04
SRSF1-209ENST00000585096 MAST1Q9Y2H9 1570 aa27.81■■■□□ 2.04
SRSF1-209ENST00000585096 CLTCQ00610 1675 aaKnown RBP27.8■■■□□ 2.04
SRSF1-209ENST00000585096 WASHC2CQ9Y4E1 1318 aa27.78■■■□□ 2.04
SRSF1-209ENST00000585096 PTPRKQ15262 1439 aa27.77■■■□□ 2.04
SRSF1-209ENST00000585096 FGD6Q6ZV73 1430 aa27.77■■■□□ 2.04
SRSF1-209ENST00000585096 PTPN23Q9H3S7 1636 aa27.74■■■□□ 2.03
SRSF1-209ENST00000585096 FAM135AQ9P2D6 1515 aa27.74■■■□□ 2.03
SRSF1-209ENST00000585096 ABCC5O15440 1437 aa27.74■■■□□ 2.03
SRSF1-209ENST00000585096 KDM5DQ9BY66 1539 aa27.72■■■□□ 2.03
SRSF1-209ENST00000585096 TCOF1Q13428 1488 aaKnown RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms