RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CDC42BPBQ9Y5S2 1711 aa22.17■■□□□ 1.14
CDK5RAP3-236ENST00000584991 PREX2Q70Z35 1606 aa22.16■■□□□ 1.14
CDK5RAP3-236ENST00000584991 MYO5CQ9NQX4 1742 aa22.16■■□□□ 1.14
CDK5RAP3-236ENST00000584991 CAMSAP2Q08AD1 1489 aa22.15■■□□□ 1.14
CDK5RAP3-236ENST00000584991 PTPRKQ15262 1439 aa22.13■■□□□ 1.13
CDK5RAP3-236ENST00000584991 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
CDK5RAP3-236ENST00000584991 DNMT1P26358 1616 aaKnown RBP22.09■■□□□ 1.13
CDK5RAP3-236ENST00000584991 DIEXFQ68CQ4 756 aaKnown RBP22.09■■□□□ 1.13
CDK5RAP3-236ENST00000584991 ABCA9Q8IUA7 1624 aa22.08■■□□□ 1.12
CDK5RAP3-236ENST00000584991 PLCH2O75038 1416 aa22.07■■□□□ 1.12
CDK5RAP3-236ENST00000584991 DAPK1P53355 1430 aa22.07■■□□□ 1.12
CDK5RAP3-236ENST00000584991 MAPKBP1O60336 1514 aa22.06■■□□□ 1.12
CDK5RAP3-236ENST00000584991 SAMD9LQ8IVG5 1584 aa22.06■■□□□ 1.12
CDK5RAP3-236ENST00000584991 ABCC5O15440 1437 aa22.06■■□□□ 1.12
CDK5RAP3-236ENST00000584991 CHIC2Q9UKJ5 165 aa22.05■■□□□ 1.12
CDK5RAP3-236ENST00000584991 CLSPNQ9HAW4 1339 aa22.04■■□□□ 1.12
CDK5RAP3-236ENST00000584991 SETD5Q9C0A6 1442 aa22.04■■□□□ 1.12
CDK5RAP3-236ENST00000584991 ZNF316A6NFI3 1004 aaPredicted RBP22.02■■□□□ 1.12
CDK5RAP3-236ENST00000584991 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
CDK5RAP3-236ENST00000584991 HNRNPMP52272 730 aaKnown RBP eCLIP22■■□□□ 1.114e-8■■□□□ 12.7
CDK5RAP3-236ENST00000584991 EFCAB2Q5VUJ9 269 aa22■■□□□ 1.11
CDK5RAP3-236ENST00000584991 ARAP3Q8WWN8 1544 aa22■■□□□ 1.11
CDK5RAP3-236ENST00000584991 CROCC2H7BZ55 1655 aa21.99■■□□□ 1.11
CDK5RAP3-236ENST00000584991 HFM1A2PYH4 1435 aa21.98■■□□□ 1.11
CDK5RAP3-236ENST00000584991 RRP7BPQ9NSQ0 103 aa21.98■■□□□ 1.11
CDK5RAP3-236ENST00000584991 MBD5Q9P267 1494 aa21.97■■□□□ 1.11
CDK5RAP3-236ENST00000584991 ARHGEF5Q12774 1597 aa21.97■■□□□ 1.11
CDK5RAP3-236ENST00000584991 SYCP2Q9BX26 1530 aa21.97■■□□□ 1.11
CDK5RAP3-236ENST00000584991 NAIPQ13075 1403 aa21.96■■□□□ 1.11
CDK5RAP3-236ENST00000584991 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
CDK5RAP3-236ENST00000584991 PLEKHH2Q8IVE3 1493 aa21.95■■□□□ 1.11
CDK5RAP3-236ENST00000584991 CD109Q6YHK3 1445 aa21.94■■□□□ 1.1
CDK5RAP3-236ENST00000584991 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
CDK5RAP3-236ENST00000584991 FANCAO15360 1455 aa21.94■■□□□ 1.1
CDK5RAP3-236ENST00000584991 ADGBQ8N7X0 1667 aa21.94■■□□□ 1.1
CDK5RAP3-236ENST00000584991 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
CDK5RAP3-236ENST00000584991 GCC2Q8IWJ2 1684 aa21.93■■□□□ 1.1
CDK5RAP3-236ENST00000584991 SCAF1Q9H7N4 1312 aaKnown RBP21.93■■□□□ 1.1
CDK5RAP3-236ENST00000584991 CCDC141Q6ZP82 1450 aa21.92■■□□□ 1.1
CDK5RAP3-236ENST00000584991 ABCC1P33527 1531 aa21.92■■□□□ 1.1
CDK5RAP3-236ENST00000584991 ARHGEF12Q9NZN5 1544 aa21.92■■□□□ 1.1
CDK5RAP3-236ENST00000584991 CENPBP07199 599 aaPredicted RBP21.92■■□□□ 1.1
CDK5RAP3-236ENST00000584991 RSPH4AQ5TD94 716 aa21.92■■□□□ 1.1
CDK5RAP3-236ENST00000584991 ACIN1Q9UKV3 1341 aaKnown RBP21.91■■□□□ 1.1
CDK5RAP3-236ENST00000584991 TSPY4P0CV99 314 aa21.91■■□□□ 1.1
CDK5RAP3-236ENST00000584991 TSPY10P0CW01 314 aa21.91■■□□□ 1.1
CDK5RAP3-236ENST00000584991 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
CDK5RAP3-236ENST00000584991 SHANK2Q9UPX8 1470 aa21.91■■□□□ 1.1
CDK5RAP3-236ENST00000584991 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.09
CDK5RAP3-236ENST00000584991 ADGRL2O95490 1459 aa21.89■■□□□ 1.09
CDK5RAP3-236ENST00000584991 GLI2P10070 1586 aa21.89■■□□□ 1.09
CDK5RAP3-236ENST00000584991 NCOA1Q15788 1441 aa21.88■■□□□ 1.09
CDK5RAP3-236ENST00000584991 DIP2BQ9P265 1576 aa21.88■■□□□ 1.09
CDK5RAP3-236ENST00000584991 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
CDK5RAP3-236ENST00000584991 MAP3K4Q9Y6R4 1608 aa21.86■■□□□ 1.09
CDK5RAP3-236ENST00000584991 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
CDK5RAP3-236ENST00000584991 FAM69CQ0P6D2 419 aa21.86■■□□□ 1.09
CDK5RAP3-236ENST00000584991 KDM6BO15054 1643 aa21.85■■□□□ 1.09
CDK5RAP3-236ENST00000584991 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
CDK5RAP3-236ENST00000584991 CFAP74Q9C0B2 1584 aa21.84■■□□□ 1.09
CDK5RAP3-236ENST00000584991 ADGRL1O94910 1474 aa21.84■■□□□ 1.09
CDK5RAP3-236ENST00000584991 MAST1Q9Y2H9 1570 aa21.83■■□□□ 1.08
CDK5RAP3-236ENST00000584991 SCAPERQ9BY12 1400 aa21.82■■□□□ 1.08
CDK5RAP3-236ENST00000584991 DNAJC5Q9H3Z4 198 aa21.81■■□□□ 1.08
CDK5RAP3-236ENST00000584991 AFAP1Q8N556 730 aa21.79■■□□□ 1.08
CDK5RAP3-236ENST00000584991 KIF13AQ9H1H9 1805 aa21.77■■□□□ 1.08
CDK5RAP3-236ENST00000584991 TSPOAP1O95153 1857 aa21.77■■□□□ 1.08
CDK5RAP3-236ENST00000584991 KIF15Q9NS87 1388 aa21.77■■□□□ 1.07
CDK5RAP3-236ENST00000584991 NEO1Q92859 1461 aa21.77■■□□□ 1.07
CDK5RAP3-236ENST00000584991 ANKRD50Q9ULJ7 1429 aa21.75■■□□□ 1.07
CDK5RAP3-236ENST00000584991 SPAG9O60271 1321 aaKnown RBP21.74■■□□□ 1.07
CDK5RAP3-236ENST00000584991 TRIM52Q96A61 297 aa21.74■■□□□ 1.07
CDK5RAP3-236ENST00000584991 PLXNC1O60486 1568 aa21.74■■□□□ 1.07
CDK5RAP3-236ENST00000584991 NEUROD1Q13562 356 aa21.73■■□□□ 1.07
CDK5RAP3-236ENST00000584991 PPRC1Q5VV67 1664 aaKnown RBP21.72■■□□□ 1.07
CDK5RAP3-236ENST00000584991 RTEL1-TNFRSF6BF6WH68 1400 aa21.71■■□□□ 1.07
CDK5RAP3-236ENST00000584991 ZNF518AQ6AHZ1 1483 aa21.7■■□□□ 1.06
CDK5RAP3-236ENST00000584991 ZFYVE16Q7Z3T8 1539 aa21.7■■□□□ 1.06
CDK5RAP3-236ENST00000584991 POGZQ7Z3K3 1410 aa21.68■■□□□ 1.06
CDK5RAP3-236ENST00000584991 INO80Q9ULG1 1556 aaPredicted RBP21.68■■□□□ 1.06
CDK5RAP3-236ENST00000584991 ATP7AQ04656 1500 aa21.68■■□□□ 1.06
CDK5RAP3-236ENST00000584991 MYT1LQ9UL68 1186 aa21.67■■□□□ 1.06
CDK5RAP3-236ENST00000584991 DUOX2Q9NRD8 1548 aa21.66■■□□□ 1.06
CDK5RAP3-236ENST00000584991 DENND4BO75064 1496 aaPredicted RBP21.66■■□□□ 1.06
CDK5RAP3-236ENST00000584991 TEX14Q8IWB6 1497 aa21.65■■□□□ 1.06
CDK5RAP3-236ENST00000584991 KDM5CP41229 1560 aa21.65■■□□□ 1.06
CDK5RAP3-236ENST00000584991 KIDINS220Q9ULH0 1771 aa21.64■■□□□ 1.05
CDK5RAP3-236ENST00000584991 RAPGEF3O95398 923 aa21.64■■□□□ 1.05
CDK5RAP3-236ENST00000584991 MPHOSPH9Q99550 1183 aa21.62■■□□□ 1.05
CDK5RAP3-236ENST00000584991 RICTORQ6R327 1708 aa21.62■■□□□ 1.05
CDK5RAP3-236ENST00000584991 ERBINQ96RT1 1412 aa21.6■■□□□ 1.05
CDK5RAP3-236ENST00000584991 HECW2Q9P2P5 1572 aa21.6■■□□□ 1.05
CDK5RAP3-236ENST00000584991 MLH3Q9UHC1 1453 aa21.59■■□□□ 1.05
CDK5RAP3-236ENST00000584991 PZPP20742 1482 aa21.58■■□□□ 1.04
CDK5RAP3-236ENST00000584991 SLC4A1APQ9BWU0 796 aaKnown RBP21.58■■□□□ 1.04
CDK5RAP3-236ENST00000584991 NUP155O75694 1391 aa21.57■■□□□ 1.04
CDK5RAP3-236ENST00000584991 FRMPD1Q5SYB0 1578 aa21.56■■□□□ 1.04
CDK5RAP3-236ENST00000584991 UNC13BO14795 1591 aa21.55■■□□□ 1.04
CDK5RAP3-236ENST00000584991 SIN3AQ96ST3 1273 aa21.54■■□□□ 1.04
CDK5RAP3-236ENST00000584991 KDM5DQ9BY66 1539 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms