RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 EFCAB2Q5VUJ9 269 aa25.85■■□□□ 1.73
ERBB2-222ENST00000584908 ARHGAP5Q13017 1502 aa25.83■■□□□ 1.73
ERBB2-222ENST00000584908 MAP3K1Q13233 1512 aa25.83■■□□□ 1.73
ERBB2-222ENST00000584908 ADGRL1O94910 1474 aa25.83■■□□□ 1.73
ERBB2-222ENST00000584908 RAPGEF3O95398 923 aa25.82■■□□□ 1.72
ERBB2-222ENST00000584908 ZMYM4Q5VZL5 1548 aa25.79■■□□□ 1.72
ERBB2-222ENST00000584908 GPATCH8Q9UKJ3 1502 aaKnown RBP25.78■■□□□ 1.72
ERBB2-222ENST00000584908 SCAPERQ9BY12 1400 aa25.78■■□□□ 1.72
ERBB2-222ENST00000584908 POGZQ7Z3K3 1410 aa25.77■■□□□ 1.72
ERBB2-222ENST00000584908 SUPT6HQ7KZ85 1726 aaKnown RBP25.74■■□□□ 1.71
ERBB2-222ENST00000584908 ABCC1P33527 1531 aa25.73■■□□□ 1.71
ERBB2-222ENST00000584908 LRRC9Q6ZRR7 1453 aa25.73■■□□□ 1.71
ERBB2-222ENST00000584908 CCNB3Q8WWL7 1395 aa25.72■■□□□ 1.71
ERBB2-222ENST00000584908 ARHGEF40Q8TER5 1519 aa25.71■■□□□ 1.71
ERBB2-222ENST00000584908 MAGI2Q86UL8 1455 aa25.71■■□□□ 1.71
ERBB2-222ENST00000584908 ITSN2Q9NZM3 1697 aa25.71■■□□□ 1.71
ERBB2-222ENST00000584908 KDM5CP41229 1560 aa25.7■■□□□ 1.7
ERBB2-222ENST00000584908 ZNF518AQ6AHZ1 1483 aa25.69■■□□□ 1.7
ERBB2-222ENST00000584908 SAMD9LQ8IVG5 1584 aa25.69■■□□□ 1.7
ERBB2-222ENST00000584908 NCOA2Q15596 1464 aa25.68■■□□□ 1.7
ERBB2-222ENST00000584908 ARHGEF12Q9NZN5 1544 aa25.67■■□□□ 1.7
ERBB2-222ENST00000584908 ZFYVE16Q7Z3T8 1539 aa25.65■■□□□ 1.7
ERBB2-222ENST00000584908 KDM4FA0A1W2PPD8 638 aa25.64■■□□□ 1.7
ERBB2-222ENST00000584908 CFDP1Q9UEE9 299 aaPredicted RBP25.63■■□□□ 1.69
ERBB2-222ENST00000584908 KIAA1107Q9UPP5 1409 aa25.62■■□□□ 1.69
ERBB2-222ENST00000584908 PLEKHH2Q8IVE3 1493 aa25.62■■□□□ 1.69
ERBB2-222ENST00000584908 KANK4Q5T7N3 995 aaPredicted RBP25.62■■□□□ 1.69
ERBB2-222ENST00000584908 YEATS2Q9ULM3 1422 aa25.61■■□□□ 1.69
ERBB2-222ENST00000584908 TRAPPC8Q9Y2L5 1435 aa25.61■■□□□ 1.69
ERBB2-222ENST00000584908 HECW2Q9P2P5 1572 aa25.6■■□□□ 1.69
ERBB2-222ENST00000584908 SYCP2Q9BX26 1530 aa25.59■■□□□ 1.69
ERBB2-222ENST00000584908 AFAP1Q8N556 730 aa25.59■■□□□ 1.69
ERBB2-222ENST00000584908 MLH3Q9UHC1 1453 aa25.59■■□□□ 1.69
ERBB2-222ENST00000584908 APLP2Q06481 763 aa25.56■■□□□ 1.68
ERBB2-222ENST00000584908 ZNF777Q9ULD5 760 aaPredicted RBP25.56■■□□□ 1.68
ERBB2-222ENST00000584908 SIGLEC1Q9BZZ2 1709 aa25.53■■□□□ 1.68
ERBB2-222ENST00000584908 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
ERBB2-222ENST00000584908 ATP10AO60312 1499 aa25.53■■□□□ 1.68
ERBB2-222ENST00000584908 KIDINS220Q9ULH0 1771 aa25.53■■□□□ 1.68
ERBB2-222ENST00000584908 BCORL1Q5H9F3 1711 aa25.52■■□□□ 1.68
ERBB2-222ENST00000584908 DIP2CQ9Y2E4 1556 aa25.52■■□□□ 1.68
ERBB2-222ENST00000584908 ADAMTSL3P82987 1691 aa25.51■■□□□ 1.67
ERBB2-222ENST00000584908 MBD5Q9P267 1494 aa25.51■■□□□ 1.67
ERBB2-222ENST00000584908 REREQ9P2R6 1566 aa25.5■■□□□ 1.67
ERBB2-222ENST00000584908 HNRNPMP52272 730 aaKnown RBP eCLIP25.5■■□□□ 1.67
ERBB2-222ENST00000584908 ABCA6Q8N139 1617 aa25.5■■□□□ 1.67
ERBB2-222ENST00000584908 C9orf84Q5VXU9 1444 aa25.49■■□□□ 1.67
ERBB2-222ENST00000584908 ZNF644Q9H582 1327 aaPredicted RBP25.49■■□□□ 1.67
ERBB2-222ENST00000584908 CAMSAP2Q08AD1 1489 aa25.49■■□□□ 1.67
ERBB2-222ENST00000584908 MYOM3Q5VTT5 1437 aa25.48■■□□□ 1.67
ERBB2-222ENST00000584908 INO80Q9ULG1 1556 aaPredicted RBP25.47■■□□□ 1.67
ERBB2-222ENST00000584908 MIA2Q96PC5 1412 aa25.47■■□□□ 1.67
ERBB2-222ENST00000584908 ATP7AQ04656 1500 aa25.44■■□□□ 1.66
ERBB2-222ENST00000584908 ARHGEF5Q12774 1597 aa25.43■■□□□ 1.66
ERBB2-222ENST00000584908 SPAG9O60271 1321 aaKnown RBP25.42■■□□□ 1.66
ERBB2-222ENST00000584908 ARID4BQ4LE39 1312 aaPredicted RBP25.42■■□□□ 1.66
ERBB2-222ENST00000584908 CCDC141Q6ZP82 1450 aa25.4■■□□□ 1.66
ERBB2-222ENST00000584908 RSPH4AQ5TD94 716 aa25.39■■□□□ 1.66
ERBB2-222ENST00000584908 AGLP35573 1532 aa25.39■■□□□ 1.66
ERBB2-222ENST00000584908 RTEL1-TNFRSF6BF6WH68 1400 aa25.39■■□□□ 1.66
ERBB2-222ENST00000584908 MADDQ8WXG6 1647 aa25.38■■□□□ 1.65
ERBB2-222ENST00000584908 MYT1LQ9UL68 1186 aa25.37■■□□□ 1.65
ERBB2-222ENST00000584908 ADGBQ8N7X0 1667 aa25.34■■□□□ 1.65
ERBB2-222ENST00000584908 PLXNC1O60486 1568 aa25.33■■□□□ 1.65
ERBB2-222ENST00000584908 PTPN23Q9H3S7 1636 aa25.33■■□□□ 1.65
ERBB2-222ENST00000584908 FGD6Q6ZV73 1430 aa25.32■■□□□ 1.64
ERBB2-222ENST00000584908 FER1L4A9Z1Z3 1794 aa25.31■■□□□ 1.64
ERBB2-222ENST00000584908 PTPRMP28827 1452 aa25.31■■□□□ 1.64
ERBB2-222ENST00000584908 TCOF1Q13428 1488 aaKnown RBP25.31■■□□□ 1.64
ERBB2-222ENST00000584908 MAST1Q9Y2H9 1570 aa25.3■■□□□ 1.64
ERBB2-222ENST00000584908 RIMS1Q86UR5 1692 aaKnown RBP25.3■■□□□ 1.64
ERBB2-222ENST00000584908 A2MP01023 1474 aa25.29■■□□□ 1.64
ERBB2-222ENST00000584908 CROCC2H7BZ55 1655 aa25.24■■□□□ 1.63
ERBB2-222ENST00000584908 TSPY4P0CV99 314 aa25.24■■□□□ 1.63
ERBB2-222ENST00000584908 TSPY10P0CW01 314 aa25.24■■□□□ 1.63
ERBB2-222ENST00000584908 MLECQ14165 292 aa25.23■■□□□ 1.63
ERBB2-222ENST00000584908 DNMT1P26358 1616 aaKnown RBP25.22■■□□□ 1.63
ERBB2-222ENST00000584908 SHANK2Q9UPX8 1470 aa25.21■■□□□ 1.63
ERBB2-222ENST00000584908 DHX29Q7Z478 1369 aaKnown RBP25.21■■□□□ 1.63
ERBB2-222ENST00000584908 ABCC5O15440 1437 aa25.19■■□□□ 1.62
ERBB2-222ENST00000584908 DAPK1P53355 1430 aa25.17■■□□□ 1.62
ERBB2-222ENST00000584908 MROH2AA6NES4 1674 aa25.12■■□□□ 1.61
ERBB2-222ENST00000584908 CNTLNQ9NXG0 1405 aa25.12■■□□□ 1.61
ERBB2-222ENST00000584908 EIF2AK4Q9P2K8 1649 aaKnown RBP25.1■■□□□ 1.61
ERBB2-222ENST00000584908 PPP6R1Q9UPN7 881 aa25.1■■□□□ 1.61
ERBB2-222ENST00000584908 C3P01024 1663 aa25.09■■□□□ 1.61
ERBB2-222ENST00000584908 DUOX2Q9NRD8 1548 aa25.08■■□□□ 1.61
ERBB2-222ENST00000584908 FAM135AQ9P2D6 1515 aa25.08■■□□□ 1.6
ERBB2-222ENST00000584908 RNF17Q9BXT8 1623 aaKnown RBP25.06■■□□□ 1.6
ERBB2-222ENST00000584908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.06■■□□□ 1.6
ERBB2-222ENST00000584908 ADGRL2O95490 1459 aa25.05■■□□□ 1.6
ERBB2-222ENST00000584908 CLTCQ00610 1675 aaKnown RBP25.05■■□□□ 1.6
ERBB2-222ENST00000584908 PPARGC1BQ86YN6 1023 aaKnown RBP25.05■■□□□ 1.6
ERBB2-222ENST00000584908 ESF1Q9H501 851 aaKnown RBP25.05■■□□□ 1.6
ERBB2-222ENST00000584908 SETD1BQ9UPS6 1966 aaKnown RBP25.05■■□□□ 1.6
ERBB2-222ENST00000584908 FAM50AQ14320 339 aaKnown RBP25.04■■□□□ 1.6
ERBB2-222ENST00000584908 KIF15Q9NS87 1388 aa25.04■■□□□ 1.6
ERBB2-222ENST00000584908 KIF3BO15066 747 aa25.03■■□□□ 1.6
ERBB2-222ENST00000584908 GGT6Q6P531 493 aa25.03■■□□□ 1.6
ERBB2-222ENST00000584908 NCOA1Q15788 1441 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms