RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 CEP170Q5SW79 1584 aa18.66■□□□□ 0.58
CSNK1D-222ENST00000584377 MPHOSPH9Q99550 1183 aa18.66■□□□□ 0.58
CSNK1D-222ENST00000584377 ROCK1Q13464 1354 aa18.65■□□□□ 0.58
CSNK1D-222ENST00000584377 ZNF644Q9H582 1327 aaPredicted RBP18.64■□□□□ 0.57
CSNK1D-222ENST00000584377 ABCC5O15440 1437 aa18.64■□□□□ 0.57
CSNK1D-222ENST00000584377 DNMT1P26358 1616 aaKnown RBP18.63■□□□□ 0.57
CSNK1D-222ENST00000584377 ANP32CO43423 234 aa18.62■□□□□ 0.57
CSNK1D-222ENST00000584377 TROQ12816 1431 aaPredicted RBP18.62■□□□□ 0.57
CSNK1D-222ENST00000584377 PLB1Q6P1J6 1458 aa18.62■□□□□ 0.57
CSNK1D-222ENST00000584377 PRG4Q92954 1404 aaPredicted RBP18.62■□□□□ 0.57
CSNK1D-222ENST00000584377 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
CSNK1D-222ENST00000584377 NUP160Q12769 1436 aa18.59■□□□□ 0.57
CSNK1D-222ENST00000584377 JPH4Q96JJ6 628 aa18.59■□□□□ 0.57
CSNK1D-222ENST00000584377 CCER2I3L3R5 266 aa18.59■□□□□ 0.57
CSNK1D-222ENST00000584377 FOXD1Q16676 465 aa18.58■□□□□ 0.56
CSNK1D-222ENST00000584377 CFDP1Q9UEE9 299 aaPredicted RBP18.57■□□□□ 0.56
CSNK1D-222ENST00000584377 CAMSAP2Q08AD1 1489 aa18.55■□□□□ 0.56
CSNK1D-222ENST00000584377 L3MBTL2Q969R5 705 aa18.54■□□□□ 0.56
CSNK1D-222ENST00000584377 GPATCH8Q9UKJ3 1502 aaKnown RBP18.54■□□□□ 0.56
CSNK1D-222ENST00000584377 ANKRD30BQ9BXX2 1392 aa18.53■□□□□ 0.56
CSNK1D-222ENST00000584377 ITSN2Q9NZM3 1697 aa18.53■□□□□ 0.56
CSNK1D-222ENST00000584377 HSPA5P11021 654 aaKnown RBP18.52■□□□□ 0.56
CSNK1D-222ENST00000584377 SLC4A1APQ9BWU0 796 aaKnown RBP18.52■□□□□ 0.55
CSNK1D-222ENST00000584377 KIF14Q15058 1648 aa18.51■□□□□ 0.55
CSNK1D-222ENST00000584377 ADCY10Q96PN6 1610 aa18.51■□□□□ 0.55
CSNK1D-222ENST00000584377 ZNF777Q9ULD5 760 aaPredicted RBP18.51■□□□□ 0.55
CSNK1D-222ENST00000584377 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
CSNK1D-222ENST00000584377 RPRD2Q5VT52 1461 aaKnown RBP18.5■□□□□ 0.55
CSNK1D-222ENST00000584377 NCOA1Q15788 1441 aa18.49■□□□□ 0.55
CSNK1D-222ENST00000584377 WASHC2AQ641Q2 1341 aa18.47■□□□□ 0.55
CSNK1D-222ENST00000584377 PLEKHD1A6NEE1 506 aa18.47■□□□□ 0.55
CSNK1D-222ENST00000584377 ABCA8O94911 1581 aa18.46■□□□□ 0.55
CSNK1D-222ENST00000584377 ADGRL2O95490 1459 aa18.44■□□□□ 0.54
CSNK1D-222ENST00000584377 TEX14Q8IWB6 1497 aa18.44■□□□□ 0.54
CSNK1D-222ENST00000584377 ADGBQ8N7X0 1667 aa18.44■□□□□ 0.54
CSNK1D-222ENST00000584377 PZPP20742 1482 aa18.44■□□□□ 0.54
CSNK1D-222ENST00000584377 ATP10BO94823 1461 aa18.43■□□□□ 0.54
CSNK1D-222ENST00000584377 ANKRD30AQ9BXX3 1397 aa18.43■□□□□ 0.54
CSNK1D-222ENST00000584377 CROCC2H7BZ55 1655 aa18.41■□□□□ 0.54
CSNK1D-222ENST00000584377 NBPF8Q3BBV2 869 aa18.41■□□□□ 0.54
CSNK1D-222ENST00000584377 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
CSNK1D-222ENST00000584377 PRKCSHP14314 528 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-222ENST00000584377 CDC42BPAQ5VT25 1732 aa18.38■□□□□ 0.53
CSNK1D-222ENST00000584377 ANKRD50Q9ULJ7 1429 aa18.38■□□□□ 0.53
CSNK1D-222ENST00000584377 KIAA1107Q9UPP5 1409 aa18.37■□□□□ 0.53
CSNK1D-222ENST00000584377 PTPRGP23470 1445 aa18.36■□□□□ 0.53
CSNK1D-222ENST00000584377 CNTLNQ9NXG0 1405 aa18.36■□□□□ 0.53
CSNK1D-222ENST00000584377 CCDC7Q96M83 1385 aa18.35■□□□□ 0.53
CSNK1D-222ENST00000584377 C9orf84Q5VXU9 1444 aa18.35■□□□□ 0.53
CSNK1D-222ENST00000584377 SHANK2Q9UPX8 1470 aa18.35■□□□□ 0.53
CSNK1D-222ENST00000584377 C11orf95C9JLR9 678 aaPredicted RBP18.35■□□□□ 0.53
CSNK1D-222ENST00000584377 PKD2Q13563 968 aa18.35■□□□□ 0.53
CSNK1D-222ENST00000584377 TSPY4P0CV99 314 aa18.32■□□□□ 0.52
CSNK1D-222ENST00000584377 TSPY10P0CW01 314 aa18.32■□□□□ 0.52
CSNK1D-222ENST00000584377 FKBP8Q14318 412 aa18.32■□□□□ 0.52
CSNK1D-222ENST00000584377 SPATA31E1Q6ZUB1 1445 aa18.32■□□□□ 0.52
CSNK1D-222ENST00000584377 NUP155O75694 1391 aa18.3■□□□□ 0.52
CSNK1D-222ENST00000584377 NEFLP07196 543 aa18.29■□□□□ 0.52
CSNK1D-222ENST00000584377 MBD5Q9P267 1494 aa18.29■□□□□ 0.52
CSNK1D-222ENST00000584377 HNRNPMP52272 730 aaKnown RBP eCLIP18.28■□□□□ 0.527e-7■■■□□ 15.3
CSNK1D-222ENST00000584377 BCANQ96GW7 911 aa18.28■□□□□ 0.52
CSNK1D-222ENST00000584377 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
CSNK1D-222ENST00000584377 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.52
CSNK1D-222ENST00000584377 KIF15Q9NS87 1388 aa18.26■□□□□ 0.51
CSNK1D-222ENST00000584377 ZNF326Q5BKZ1 582 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-222ENST00000584377 ARHGEF5Q12774 1597 aa18.25■□□□□ 0.51
CSNK1D-222ENST00000584377 PRKRIP1Q9H875 184 aaPredicted RBP18.25■□□□□ 0.51
CSNK1D-222ENST00000584377 CHD1O14646 1710 aa18.24■□□□□ 0.51
CSNK1D-222ENST00000584377 RBM19Q9Y4C8 960 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-222ENST00000584377 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
CSNK1D-222ENST00000584377 CCDC141Q6ZP82 1450 aa18.22■□□□□ 0.51
CSNK1D-222ENST00000584377 USP47Q96K76 1375 aa18.21■□□□□ 0.51
CSNK1D-222ENST00000584377 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
CSNK1D-222ENST00000584377 CCDC184Q52MB2 194 aa18.21■□□□□ 0.51
CSNK1D-222ENST00000584377 PREX2Q70Z35 1606 aa18.21■□□□□ 0.51
CSNK1D-222ENST00000584377 POLR1AO95602 1720 aaPredicted RBP18.21■□□□□ 0.51
CSNK1D-222ENST00000584377 RSPH4AQ5TD94 716 aa18.2■□□□□ 0.5
CSNK1D-222ENST00000584377 CDC42BPBQ9Y5S2 1711 aa18.2■□□□□ 0.5
CSNK1D-222ENST00000584377 SHROOM2Q13796 1616 aa18.18■□□□□ 0.5
CSNK1D-222ENST00000584377 UHRF1BP1Q6BDS2 1440 aa18.18■□□□□ 0.5
CSNK1D-222ENST00000584377 MRS2Q9HD23 443 aa18.17■□□□□ 0.5
CSNK1D-222ENST00000584377 ARHGEF12Q9NZN5 1544 aa18.16■□□□□ 0.5
CSNK1D-222ENST00000584377 RALGAPBQ86X10 1494 aa18.15■□□□□ 0.5
CSNK1D-222ENST00000584377 ARHGAP5Q13017 1502 aa18.15■□□□□ 0.5
CSNK1D-222ENST00000584377 SYCP2Q9BX26 1530 aa18.14■□□□□ 0.49
CSNK1D-222ENST00000584377 KDM5CP41229 1560 aa18.14■□□□□ 0.49
CSNK1D-222ENST00000584377 TTC37Q6PGP7 1564 aa18.14■□□□□ 0.49
CSNK1D-222ENST00000584377 FAM9BQ8IZU0 186 aa18.14■□□□□ 0.49
CSNK1D-222ENST00000584377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.13■□□□□ 0.49
CSNK1D-222ENST00000584377 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
CSNK1D-222ENST00000584377 POLR3GLQ9BT43 218 aa18.13■□□□□ 0.49
CSNK1D-222ENST00000584377 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
CSNK1D-222ENST00000584377 BCORL1Q5H9F3 1711 aa18.12■□□□□ 0.49
CSNK1D-222ENST00000584377 ERCC6L2Q5T890 1561 aa18.12■□□□□ 0.49
CSNK1D-222ENST00000584377 CARD11Q9BXL7 1154 aa18.12■□□□□ 0.49
CSNK1D-222ENST00000584377 ARID4BQ4LE39 1312 aaPredicted RBP18.12■□□□□ 0.49
CSNK1D-222ENST00000584377 KDM2AQ9Y2K7 1162 aa18.12■□□□□ 0.49
CSNK1D-222ENST00000584377 DCAF11Q8TEB1 546 aa18.11■□□□□ 0.49
CSNK1D-222ENST00000584377 DHX29Q7Z478 1369 aaKnown RBP18.1■□□□□ 0.49
CSNK1D-222ENST00000584377 MSH5O43196 834 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms