RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 PREX2Q70Z35 1606 aa39.54■■■■□ 3.92
TTC39C-209ENST00000584250 CDC42BPAQ5VT25 1732 aa39.54■■■■□ 3.92
TTC39C-209ENST00000584250 SCAPERQ9BY12 1400 aa39.53■■■■□ 3.92
TTC39C-209ENST00000584250 KDM4FA0A1W2PPD8 638 aa39.5■■■■□ 3.91
TTC39C-209ENST00000584250 TIAM1Q13009 1591 aa39.49■■■■□ 3.91
TTC39C-209ENST00000584250 EHBP1L1Q8N3D4 1523 aa39.48■■■■□ 3.91
TTC39C-209ENST00000584250 GPATCH8Q9UKJ3 1502 aaKnown RBP39.46■■■■□ 3.91
TTC39C-209ENST00000584250 POGZQ7Z3K3 1410 aa39.43■■■■□ 3.9
TTC39C-209ENST00000584250 ZMYM4Q5VZL5 1548 aa39.38■■■■□ 3.89
TTC39C-209ENST00000584250 ARHGEF12Q9NZN5 1544 aa39.38■■■■□ 3.89
TTC39C-209ENST00000584250 CCNB3Q8WWL7 1395 aa39.37■■■■□ 3.89
TTC39C-209ENST00000584250 AEBP2Q6ZN18 517 aaPredicted RBP39.37■■■■□ 3.89
TTC39C-209ENST00000584250 KANK4Q5T7N3 995 aaPredicted RBP39.35■■■■□ 3.89
TTC39C-209ENST00000584250 YEATS2Q9ULM3 1422 aa39.34■■■■□ 3.89
TTC39C-209ENST00000584250 ZNF777Q9ULD5 760 aaPredicted RBP39.34■■■■□ 3.89
TTC39C-209ENST00000584250 ABCC1P33527 1531 aa39.34■■■■□ 3.89
TTC39C-209ENST00000584250 AFAP1Q8N556 730 aa39.33■■■■□ 3.89
TTC39C-209ENST00000584250 LRRC9Q6ZRR7 1453 aa39.32■■■■□ 3.89
TTC39C-209ENST00000584250 ARHGEF40Q8TER5 1519 aa39.32■■■■□ 3.89
TTC39C-209ENST00000584250 SAMD9LQ8IVG5 1584 aa39.32■■■■□ 3.88
TTC39C-209ENST00000584250 NCOA2Q15596 1464 aa39.3■■■■□ 3.88
TTC39C-209ENST00000584250 TRAPPC8Q9Y2L5 1435 aa39.29■■■■□ 3.88
TTC39C-209ENST00000584250 MAP3K1Q13233 1512 aa39.29■■■■□ 3.88
TTC39C-209ENST00000584250 CFDP1Q9UEE9 299 aaPredicted RBP39.28■■■■□ 3.88
TTC39C-209ENST00000584250 ITSN2Q9NZM3 1697 aa39.28■■■■□ 3.88
TTC39C-209ENST00000584250 SUPT6HQ7KZ85 1726 aaKnown RBP39.28■■■■□ 3.88
TTC39C-209ENST00000584250 ZFYVE16Q7Z3T8 1539 aa39.26■■■■□ 3.88
TTC39C-209ENST00000584250 ZNF518AQ6AHZ1 1483 aa39.25■■■■□ 3.87
TTC39C-209ENST00000584250 KDM5CP41229 1560 aa39.24■■■■□ 3.87
TTC39C-209ENST00000584250 MAGI2Q86UL8 1455 aa39.22■■■■□ 3.87
TTC39C-209ENST00000584250 ZNF644Q9H582 1327 aaPredicted RBP39.21■■■■□ 3.87
TTC39C-209ENST00000584250 SYCP2Q9BX26 1530 aa39.21■■■■□ 3.87
TTC39C-209ENST00000584250 SIGLEC1Q9BZZ2 1709 aa39.2■■■■□ 3.87
TTC39C-209ENST00000584250 HNRNPMP52272 730 aaKnown RBP eCLIP39.19■■■■□ 3.86
TTC39C-209ENST00000584250 HECW2Q9P2P5 1572 aa39.12■■■■□ 3.85
TTC39C-209ENST00000584250 ARID4BQ4LE39 1312 aaPredicted RBP39.12■■■■□ 3.85
TTC39C-209ENST00000584250 KIAA1107Q9UPP5 1409 aa39.09■■■■□ 3.85
TTC39C-209ENST00000584250 APLP2Q06481 763 aa39.09■■■■□ 3.85
TTC39C-209ENST00000584250 MYT1LQ9UL68 1186 aa39.08■■■■□ 3.85
TTC39C-209ENST00000584250 MLH3Q9UHC1 1453 aa39.08■■■■□ 3.85
TTC39C-209ENST00000584250 ATP10AO60312 1499 aa39.07■■■■□ 3.85
TTC39C-209ENST00000584250 PLEKHH2Q8IVE3 1493 aa39.07■■■■□ 3.85
TTC39C-209ENST00000584250 DIP2CQ9Y2E4 1556 aa39.06■■■■□ 3.84
TTC39C-209ENST00000584250 BCORL1Q5H9F3 1711 aa39.06■■■■□ 3.84
TTC39C-209ENST00000584250 ABCA6Q8N139 1617 aa39.05■■■■□ 3.84
TTC39C-209ENST00000584250 KIDINS220Q9ULH0 1771 aa39.05■■■■□ 3.84
TTC39C-209ENST00000584250 ADAMTSL3P82987 1691 aa39.03■■■■□ 3.84
TTC39C-209ENST00000584250 MBD5Q9P267 1494 aa39.02■■■■□ 3.84
TTC39C-209ENST00000584250 C9orf84Q5VXU9 1444 aa39.01■■■■□ 3.84
TTC39C-209ENST00000584250 CAMSAP2Q08AD1 1489 aa39■■■■□ 3.83
TTC39C-209ENST00000584250 SPAG9O60271 1321 aaKnown RBP38.96■■■■□ 3.83
TTC39C-209ENST00000584250 MADDQ8WXG6 1647 aa38.94■■■■□ 3.82
TTC39C-209ENST00000584250 MYOM3Q5VTT5 1437 aa38.94■■■■□ 3.82
TTC39C-209ENST00000584250 MLECQ14165 292 aa38.93■■■■□ 3.82
TTC39C-209ENST00000584250 INO80Q9ULG1 1556 aaPredicted RBP38.91■■■■□ 3.82
TTC39C-209ENST00000584250 ATP7AQ04656 1500 aa38.9■■■■□ 3.82
TTC39C-209ENST00000584250 REREQ9P2R6 1566 aa38.87■■■■□ 3.81
TTC39C-209ENST00000584250 MIA2Q96PC5 1412 aa38.83■■■■□ 3.81
TTC39C-209ENST00000584250 PTPRMP28827 1452 aa38.83■■■■□ 3.81
TTC39C-209ENST00000584250 CCDC141Q6ZP82 1450 aa38.82■■■■□ 3.81
TTC39C-209ENST00000584250 RIMS1Q86UR5 1692 aaKnown RBP38.81■■■■□ 3.8
TTC39C-209ENST00000584250 ARHGEF5Q12774 1597 aa38.78■■■■□ 3.8
TTC39C-209ENST00000584250 AGLP35573 1532 aa38.76■■■■□ 3.8
TTC39C-209ENST00000584250 FER1L4A9Z1Z3 1794 aa38.73■■■■□ 3.79
TTC39C-209ENST00000584250 RTEL1-TNFRSF6BF6WH68 1400 aa38.72■■■■□ 3.79
TTC39C-209ENST00000584250 PPARGC1BQ86YN6 1023 aaKnown RBP38.72■■■■□ 3.79
TTC39C-209ENST00000584250 FGD6Q6ZV73 1430 aa38.72■■■■□ 3.79
TTC39C-209ENST00000584250 PTPN23Q9H3S7 1636 aa38.71■■■■□ 3.79
TTC39C-209ENST00000584250 A2MP01023 1474 aa38.71■■■■□ 3.79
TTC39C-209ENST00000584250 RSPH4AQ5TD94 716 aa38.7■■■■□ 3.79
TTC39C-209ENST00000584250 PLXNC1O60486 1568 aa38.69■■■■□ 3.78
TTC39C-209ENST00000584250 PLPPR3Q6T4P5 718 aa38.67■■■■□ 3.78
TTC39C-209ENST00000584250 ADGBQ8N7X0 1667 aa38.66■■■■□ 3.78
TTC39C-209ENST00000584250 TCOF1Q13428 1488 aaKnown RBP38.62■■■■□ 3.77
TTC39C-209ENST00000584250 TSPY4P0CV99 314 aa38.61■■■■□ 3.77
TTC39C-209ENST00000584250 TSPY10P0CW01 314 aa38.61■■■■□ 3.77
TTC39C-209ENST00000584250 MAST1Q9Y2H9 1570 aa38.57■■■■□ 3.77
TTC39C-209ENST00000584250 ABCC5O15440 1437 aa38.57■■■■□ 3.77
TTC39C-209ENST00000584250 DHX29Q7Z478 1369 aaKnown RBP38.57■■■■□ 3.76
TTC39C-209ENST00000584250 CEBPAP49715 358 aaPredicted RBP38.56■■■■□ 3.76
TTC39C-209ENST00000584250 DAPK1P53355 1430 aa38.51■■■■□ 3.76
TTC39C-209ENST00000584250 DNMT1P26358 1616 aaKnown RBP38.51■■■■□ 3.76
TTC39C-209ENST00000584250 CROCC2H7BZ55 1655 aa38.51■■■■□ 3.76
TTC39C-209ENST00000584250 GGT6Q6P531 493 aa38.49■■■■□ 3.75
TTC39C-209ENST00000584250 FAM50AQ14320 339 aaKnown RBP38.47■■■■□ 3.75
TTC39C-209ENST00000584250 KIF3BO15066 747 aa38.44■■■■□ 3.74
TTC39C-209ENST00000584250 SHANK2Q9UPX8 1470 aa38.43■■■■□ 3.74
TTC39C-209ENST00000584250 C3P01024 1663 aa38.42■■■■□ 3.74
TTC39C-209ENST00000584250 ESF1Q9H501 851 aaKnown RBP38.41■■■■□ 3.74
TTC39C-209ENST00000584250 CHIC2Q9UKJ5 165 aa38.4■■■■□ 3.74
TTC39C-209ENST00000584250 CLTCQ00610 1675 aaKnown RBP38.38■■■■□ 3.73
TTC39C-209ENST00000584250 CNTLNQ9NXG0 1405 aa38.36■■■■□ 3.73
TTC39C-209ENST00000584250 LMTK3Q96Q04 1460 aa38.35■■■■□ 3.73
TTC39C-209ENST00000584250 RRP7BPQ9NSQ0 103 aa38.35■■■■□ 3.73
TTC39C-209ENST00000584250 KIF15Q9NS87 1388 aa38.33■■■■□ 3.73
TTC39C-209ENST00000584250 MROH2AA6NES4 1674 aa38.31■■■■□ 3.72
TTC39C-209ENST00000584250 ZMYM3Q14202 1370 aa38.31■■■■□ 3.72
TTC39C-209ENST00000584250 DUOX2Q9NRD8 1548 aa38.3■■■■□ 3.72
TTC39C-209ENST00000584250 PTPRKQ15262 1439 aa38.29■■■■□ 3.72
TTC39C-209ENST00000584250 NCOA1Q15788 1441 aa38.25■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms