RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 POGZQ7Z3K3 1410 aa34.48■■■■□ 3.11
PPP4R1-228ENST00000584074 ZMYM4Q5VZL5 1548 aa34.48■■■■□ 3.11
PPP4R1-228ENST00000584074 ARHGEF40Q8TER5 1519 aa34.47■■■■□ 3.11
PPP4R1-228ENST00000584074 ARID4BQ4LE39 1312 aaPredicted RBP34.44■■■■□ 3.1
PPP4R1-228ENST00000584074 YEATS2Q9ULM3 1422 aa34.43■■■■□ 3.1
PPP4R1-228ENST00000584074 ZFYVE16Q7Z3T8 1539 aa34.4■■■■□ 3.1
PPP4R1-228ENST00000584074 MAGI2Q86UL8 1455 aa34.4■■■■□ 3.1
PPP4R1-228ENST00000584074 CDC42BPBQ9Y5S2 1711 aa34.39■■■■□ 3.1
PPP4R1-228ENST00000584074 PREX2Q70Z35 1606 aa34.37■■■■□ 3.09
PPP4R1-228ENST00000584074 AFAP1Q8N556 730 aa34.34■■■■□ 3.09
PPP4R1-228ENST00000584074 ADAMTSL3P82987 1691 aa34.34■■■■□ 3.09
PPP4R1-228ENST00000584074 ZNF518AQ6AHZ1 1483 aa34.33■■■■□ 3.09
PPP4R1-228ENST00000584074 MTUS2Q5JR59 1369 aa34.32■■■■□ 3.08
PPP4R1-228ENST00000584074 BCORL1Q5H9F3 1711 aa34.31■■■■□ 3.08
PPP4R1-228ENST00000584074 CDC42BPAQ5VT25 1732 aa34.3■■■■□ 3.08
PPP4R1-228ENST00000584074 GPATCH8Q9UKJ3 1502 aaKnown RBP34.28■■■■□ 3.08
PPP4R1-228ENST00000584074 ARHGEF12Q9NZN5 1544 aa34.27■■■■□ 3.08
PPP4R1-228ENST00000584074 ABCC1P33527 1531 aa34.26■■■■□ 3.08
PPP4R1-228ENST00000584074 SIGLEC1Q9BZZ2 1709 aa34.26■■■■□ 3.07
PPP4R1-228ENST00000584074 KDM5CP41229 1560 aa34.25■■■■□ 3.07
PPP4R1-228ENST00000584074 ZNF777Q9ULD5 760 aaPredicted RBP34.25■■■■□ 3.07
PPP4R1-228ENST00000584074 PTPRMP28827 1452 aa34.25■■■■□ 3.07
PPP4R1-228ENST00000584074 TRAPPC8Q9Y2L5 1435 aa34.24■■■■□ 3.07
PPP4R1-228ENST00000584074 ATP10AO60312 1499 aa34.24■■■■□ 3.07
PPP4R1-228ENST00000584074 MADDQ8WXG6 1647 aa34.23■■■■□ 3.07
PPP4R1-228ENST00000584074 MYT1LQ9UL68 1186 aa34.21■■■■□ 3.07
PPP4R1-228ENST00000584074 CCNB3Q8WWL7 1395 aa34.21■■■■□ 3.07
PPP4R1-228ENST00000584074 C9orf84Q5VXU9 1444 aa34.19■■■■□ 3.06
PPP4R1-228ENST00000584074 EHBP1L1Q8N3D4 1523 aa34.19■■■■□ 3.06
PPP4R1-228ENST00000584074 CFDP1Q9UEE9 299 aaPredicted RBP34.18■■■■□ 3.06
PPP4R1-228ENST00000584074 ITSN2Q9NZM3 1697 aa34.18■■■■□ 3.06
PPP4R1-228ENST00000584074 MLECQ14165 292 aa34.17■■■■□ 3.06
PPP4R1-228ENST00000584074 SAMD9LQ8IVG5 1584 aa34.17■■■■□ 3.06
PPP4R1-228ENST00000584074 HECW2Q9P2P5 1572 aa34.17■■■■□ 3.06
PPP4R1-228ENST00000584074 VPS8Q8N3P4 1428 aa34.16■■■■□ 3.06
PPP4R1-228ENST00000584074 MLH3Q9UHC1 1453 aa34.15■■■■□ 3.06
PPP4R1-228ENST00000584074 HNRNPMP52272 730 aaKnown RBP eCLIP34.12■■■■□ 3.054e-6■■■■□ 23.6
PPP4R1-228ENST00000584074 DIP2CQ9Y2E4 1556 aa34.11■■■■□ 3.05
PPP4R1-228ENST00000584074 SYCP2Q9BX26 1530 aa34.1■■■■□ 3.05
PPP4R1-228ENST00000584074 RIMS1Q86UR5 1692 aaKnown RBP34.09■■■■□ 3.05
PPP4R1-228ENST00000584074 TIAM1Q13009 1591 aa34.09■■■■□ 3.05
PPP4R1-228ENST00000584074 ABCA6Q8N139 1617 aa34.07■■■■□ 3.04
PPP4R1-228ENST00000584074 KIAA1107Q9UPP5 1409 aa34.06■■■■□ 3.04
PPP4R1-228ENST00000584074 PLEKHH2Q8IVE3 1493 aa34.05■■■■□ 3.04
PPP4R1-228ENST00000584074 ZNF644Q9H582 1327 aaPredicted RBP34.04■■■■□ 3.04
PPP4R1-228ENST00000584074 PLPPR3Q6T4P5 718 aa34.02■■■■□ 3.04
PPP4R1-228ENST00000584074 NCOA2Q15596 1464 aa34.01■■■■□ 3.04
PPP4R1-228ENST00000584074 KIDINS220Q9ULH0 1771 aa34.01■■■■□ 3.04
PPP4R1-228ENST00000584074 REREQ9P2R6 1566 aa34.01■■■■□ 3.03
PPP4R1-228ENST00000584074 SPAG9O60271 1321 aaKnown RBP34.01■■■■□ 3.03
PPP4R1-228ENST00000584074 SUPT6HQ7KZ85 1726 aaKnown RBP33.97■■■■□ 3.03
PPP4R1-228ENST00000584074 LRRC9Q6ZRR7 1453 aa33.96■■■■□ 3.03
PPP4R1-228ENST00000584074 FER1L4A9Z1Z3 1794 aa33.96■■■■□ 3.03
PPP4R1-228ENST00000584074 KANK4Q5T7N3 995 aaPredicted RBP33.92■■■■□ 3.02
PPP4R1-228ENST00000584074 AGLP35573 1532 aa33.91■■■■□ 3.02
PPP4R1-228ENST00000584074 MBD5Q9P267 1494 aa33.9■■■■□ 3.02
PPP4R1-228ENST00000584074 ATP7AQ04656 1500 aa33.89■■■■□ 3.02
PPP4R1-228ENST00000584074 MAP3K1Q13233 1512 aa33.89■■■■□ 3.02
PPP4R1-228ENST00000584074 INO80Q9ULG1 1556 aaPredicted RBP33.87■■■■□ 3.01
PPP4R1-228ENST00000584074 LMTK3Q96Q04 1460 aa33.86■■■■□ 3.01
PPP4R1-228ENST00000584074 CEBPAP49715 358 aaPredicted RBP33.85■■■■□ 3.01
PPP4R1-228ENST00000584074 CAMSAP2Q08AD1 1489 aa33.82■■■■□ 3.01
PPP4R1-228ENST00000584074 A2MP01023 1474 aa33.78■■■■□ 3
PPP4R1-228ENST00000584074 ESF1Q9H501 851 aaKnown RBP33.77■■■■□ 3
PPP4R1-228ENST00000584074 APLP2Q06481 763 aa33.75■■■□□ 2.99
PPP4R1-228ENST00000584074 CCDC141Q6ZP82 1450 aa33.75■■■□□ 2.99
PPP4R1-228ENST00000584074 PLXNC1O60486 1568 aa33.74■■■□□ 2.99
PPP4R1-228ENST00000584074 RTEL1-TNFRSF6BF6WH68 1400 aa33.74■■■□□ 2.99
PPP4R1-228ENST00000584074 HSPA2P54652 639 aa33.74■■■□□ 2.99
PPP4R1-228ENST00000584074 RSPH4AQ5TD94 716 aa33.71■■■□□ 2.99
PPP4R1-228ENST00000584074 MYOM3Q5VTT5 1437 aa33.68■■■□□ 2.98
PPP4R1-228ENST00000584074 CNTLNQ9NXG0 1405 aa33.67■■■□□ 2.98
PPP4R1-228ENST00000584074 ADGBQ8N7X0 1667 aa33.67■■■□□ 2.98
PPP4R1-228ENST00000584074 ARHGEF5Q12774 1597 aa33.66■■■□□ 2.98
PPP4R1-228ENST00000584074 C3P01024 1663 aa33.64■■■□□ 2.98
PPP4R1-228ENST00000584074 GGT6Q6P531 493 aa33.64■■■□□ 2.98
PPP4R1-228ENST00000584074 MIA2Q96PC5 1412 aa33.63■■■□□ 2.97
PPP4R1-228ENST00000584074 DHX29Q7Z478 1369 aaKnown RBP33.63■■■□□ 2.97
PPP4R1-228ENST00000584074 TSPY4P0CV99 314 aa33.62■■■□□ 2.97
PPP4R1-228ENST00000584074 TSPY10P0CW01 314 aa33.62■■■□□ 2.97
PPP4R1-228ENST00000584074 PREX1Q8TCU6 1659 aa33.6■■■□□ 2.97
PPP4R1-228ENST00000584074 ZMYM3Q14202 1370 aa33.57■■■□□ 2.96
PPP4R1-228ENST00000584074 UHRF1BP1Q6BDS2 1440 aa33.56■■■□□ 2.96
PPP4R1-228ENST00000584074 MROH2AA6NES4 1674 aa33.53■■■□□ 2.96
PPP4R1-228ENST00000584074 KIF3BO15066 747 aa33.53■■■□□ 2.96
PPP4R1-228ENST00000584074 CLTCQ00610 1675 aaKnown RBP33.52■■■□□ 2.96
PPP4R1-228ENST00000584074 PPP6R1Q9UPN7 881 aa33.51■■■□□ 2.95
PPP4R1-228ENST00000584074 MAST1Q9Y2H9 1570 aa33.47■■■□□ 2.95
PPP4R1-228ENST00000584074 SETD1BQ9UPS6 1966 aaKnown RBP33.47■■■□□ 2.95
PPP4R1-228ENST00000584074 NPATQ14207 1427 aa33.46■■■□□ 2.95
PPP4R1-228ENST00000584074 FGD6Q6ZV73 1430 aa33.45■■■□□ 2.94
PPP4R1-228ENST00000584074 PTPN23Q9H3S7 1636 aa33.44■■■□□ 2.94
PPP4R1-228ENST00000584074 ILDR1Q86SU0 546 aaPredicted RBP33.43■■■□□ 2.94
PPP4R1-228ENST00000584074 ABCC5O15440 1437 aa33.4■■■□□ 2.94
PPP4R1-228ENST00000584074 PTPRKQ15262 1439 aa33.4■■■□□ 2.94
PPP4R1-228ENST00000584074 TCOF1Q13428 1488 aaKnown RBP33.37■■■□□ 2.93
PPP4R1-228ENST00000584074 WASHC2CQ9Y4E1 1318 aa33.35■■■□□ 2.93
PPP4R1-228ENST00000584074 KDM5DQ9BY66 1539 aa33.33■■■□□ 2.93
PPP4R1-228ENST00000584074 DAPK1P53355 1430 aa33.33■■■□□ 2.93
PPP4R1-228ENST00000584074 SHANK2Q9UPX8 1470 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms