RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 PREX2Q70Z35 1606 aa12.66□□□□□ -0.38
PRKCA-204ENST00000583361 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
PRKCA-204ENST00000583361 EFCAB2Q5VUJ9 269 aa12.66□□□□□ -0.38
PRKCA-204ENST00000583361 MYT1LQ9UL68 1186 aa12.66□□□□□ -0.38
PRKCA-204ENST00000583361 SCAPERQ9BY12 1400 aa12.65□□□□□ -0.38
PRKCA-204ENST00000583361 ARHGEF40Q8TER5 1519 aa12.65□□□□□ -0.38
PRKCA-204ENST00000583361 ZFYVE16Q7Z3T8 1539 aa12.63□□□□□ -0.39
PRKCA-204ENST00000583361 MTUS2Q5JR59 1369 aa12.62□□□□□ -0.39
PRKCA-204ENST00000583361 BCORL1Q5H9F3 1711 aa12.62□□□□□ -0.39
PRKCA-204ENST00000583361 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
PRKCA-204ENST00000583361 ITSN2Q9NZM3 1697 aa12.61□□□□□ -0.39
PRKCA-204ENST00000583361 POGZQ7Z3K3 1410 aa12.61□□□□□ -0.39
PRKCA-204ENST00000583361 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
PRKCA-204ENST00000583361 RIMS1Q86UR5 1692 aaKnown RBP12.59□□□□□ -0.39
PRKCA-204ENST00000583361 ZNF518AQ6AHZ1 1483 aa12.59□□□□□ -0.39
PRKCA-204ENST00000583361 MADDQ8WXG6 1647 aa12.59□□□□□ -0.39
PRKCA-204ENST00000583361 EHBP1L1Q8N3D4 1523 aa12.58□□□□□ -0.4
PRKCA-204ENST00000583361 ADAMTSL3P82987 1691 aa12.58□□□□□ -0.4
PRKCA-204ENST00000583361 YEATS2Q9ULM3 1422 aa12.58□□□□□ -0.4
PRKCA-204ENST00000583361 MAGI2Q86UL8 1455 aa12.58□□□□□ -0.4
PRKCA-204ENST00000583361 HECW2Q9P2P5 1572 aa12.57□□□□□ -0.4
PRKCA-204ENST00000583361 FER1L4A9Z1Z3 1794 aa12.57□□□□□ -0.4
PRKCA-204ENST00000583361 ABCC1P33527 1531 aa12.57□□□□□ -0.4
PRKCA-204ENST00000583361 SUPT6HQ7KZ85 1726 aaKnown RBP12.57□□□□□ -0.4
PRKCA-204ENST00000583361 CCNB3Q8WWL7 1395 aa12.56□□□□□ -0.4
PRKCA-204ENST00000583361 MLECQ14165 292 aa12.56□□□□□ -0.4
PRKCA-204ENST00000583361 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
PRKCA-204ENST00000583361 SIGLEC1Q9BZZ2 1709 aa12.56□□□□□ -0.4
PRKCA-204ENST00000583361 AFAP1Q8N556 730 aa12.55□□□□□ -0.4
PRKCA-204ENST00000583361 SAMD9LQ8IVG5 1584 aa12.55□□□□□ -0.4
PRKCA-204ENST00000583361 SYCP2Q9BX26 1530 aa12.54□□□□□ -0.4
PRKCA-204ENST00000583361 KDM5CP41229 1560 aa12.54□□□□□ -0.4
PRKCA-204ENST00000583361 TIAM1Q13009 1591 aa12.54□□□□□ -0.4
PRKCA-204ENST00000583361 VPS8Q8N3P4 1428 aa12.54□□□□□ -0.4
PRKCA-204ENST00000583361 GPATCH8Q9UKJ3 1502 aaKnown RBP12.53□□□□□ -0.4
PRKCA-204ENST00000583361 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
PRKCA-204ENST00000583361 C9orf84Q5VXU9 1444 aa12.53□□□□□ -0.4
PRKCA-204ENST00000583361 ATP10AO60312 1499 aa12.53□□□□□ -0.4
PRKCA-204ENST00000583361 PTPRMP28827 1452 aa12.53□□□□□ -0.4
PRKCA-204ENST00000583361 ABCA6Q8N139 1617 aa12.52□□□□□ -0.4
PRKCA-204ENST00000583361 TRAPPC8Q9Y2L5 1435 aa12.52□□□□□ -0.41
PRKCA-204ENST00000583361 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.41
PRKCA-204ENST00000583361 ARHGEF12Q9NZN5 1544 aa12.51□□□□□ -0.41
PRKCA-204ENST00000583361 KIDINS220Q9ULH0 1771 aa12.51□□□□□ -0.41
PRKCA-204ENST00000583361 PLEKHH2Q8IVE3 1493 aa12.49□□□□□ -0.41
PRKCA-204ENST00000583361 HNRNPMP52272 730 aaKnown RBP eCLIP12.49□□□□□ -0.413e-6■■■■□ 19.4
PRKCA-204ENST00000583361 APLP2Q06481 763 aa12.49□□□□□ -0.41
PRKCA-204ENST00000583361 NCOA2Q15596 1464 aa12.47□□□□□ -0.41
PRKCA-204ENST00000583361 MLH3Q9UHC1 1453 aa12.47□□□□□ -0.41
PRKCA-204ENST00000583361 SPAG9O60271 1321 aaKnown RBP12.47□□□□□ -0.41
PRKCA-204ENST00000583361 ATP7AQ04656 1500 aa12.46□□□□□ -0.42
PRKCA-204ENST00000583361 LRRC9Q6ZRR7 1453 aa12.46□□□□□ -0.42
PRKCA-204ENST00000583361 ESF1Q9H501 851 aaKnown RBP12.45□□□□□ -0.42
PRKCA-204ENST00000583361 REREQ9P2R6 1566 aa12.44□□□□□ -0.42
PRKCA-204ENST00000583361 ZNF644Q9H582 1327 aaPredicted RBP12.44□□□□□ -0.42
PRKCA-204ENST00000583361 ADGBQ8N7X0 1667 aa12.44□□□□□ -0.42
PRKCA-204ENST00000583361 INO80Q9ULG1 1556 aaPredicted RBP12.43□□□□□ -0.42
PRKCA-204ENST00000583361 CAMSAP2Q08AD1 1489 aa12.43□□□□□ -0.42
PRKCA-204ENST00000583361 KIAA1107Q9UPP5 1409 aa12.43□□□□□ -0.42
PRKCA-204ENST00000583361 MAP3K1Q13233 1512 aa12.41□□□□□ -0.42
PRKCA-204ENST00000583361 KANK4Q5T7N3 995 aaPredicted RBP12.4□□□□□ -0.42
PRKCA-204ENST00000583361 C3P01024 1663 aa12.4□□□□□ -0.42
PRKCA-204ENST00000583361 PREX1Q8TCU6 1659 aa12.4□□□□□ -0.42
PRKCA-204ENST00000583361 AGLP35573 1532 aa12.4□□□□□ -0.42
PRKCA-204ENST00000583361 SETD1BQ9UPS6 1966 aaKnown RBP12.39□□□□□ -0.43
PRKCA-204ENST00000583361 A2MP01023 1474 aa12.39□□□□□ -0.43
PRKCA-204ENST00000583361 CCDC141Q6ZP82 1450 aa12.39□□□□□ -0.43
PRKCA-204ENST00000583361 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
PRKCA-204ENST00000583361 CEBPAP49715 358 aaPredicted RBP12.38□□□□□ -0.43
PRKCA-204ENST00000583361 MBD5Q9P267 1494 aa12.37□□□□□ -0.43
PRKCA-204ENST00000583361 LMTK3Q96Q04 1460 aa12.36□□□□□ -0.43
PRKCA-204ENST00000583361 TSPY4P0CV99 314 aa12.36□□□□□ -0.43
PRKCA-204ENST00000583361 TSPY10P0CW01 314 aa12.36□□□□□ -0.43
PRKCA-204ENST00000583361 GGT6Q6P531 493 aa12.36□□□□□ -0.43
PRKCA-204ENST00000583361 MYOM3Q5VTT5 1437 aa12.36□□□□□ -0.43
PRKCA-204ENST00000583361 MROH2AA6NES4 1674 aa12.35□□□□□ -0.43
PRKCA-204ENST00000583361 ARHGEF5Q12774 1597 aa12.35□□□□□ -0.43
PRKCA-204ENST00000583361 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
PRKCA-204ENST00000583361 HSPA2P54652 639 aa12.34□□□□□ -0.43
PRKCA-204ENST00000583361 RSPH4AQ5TD94 716 aa12.34□□□□□ -0.43
PRKCA-204ENST00000583361 RTEL1-TNFRSF6BF6WH68 1400 aa12.34□□□□□ -0.43
PRKCA-204ENST00000583361 PTPN23Q9H3S7 1636 aa12.33□□□□□ -0.43
PRKCA-204ENST00000583361 CNTLNQ9NXG0 1405 aa12.33□□□□□ -0.44
PRKCA-204ENST00000583361 CROCC2H7BZ55 1655 aa12.32□□□□□ -0.44
PRKCA-204ENST00000583361 UHRF1BP1Q6BDS2 1440 aa12.31□□□□□ -0.44
PRKCA-204ENST00000583361 MIA2Q96PC5 1412 aa12.31□□□□□ -0.44
PRKCA-204ENST00000583361 KIF3BO15066 747 aa12.3□□□□□ -0.44
PRKCA-204ENST00000583361 CFAP65Q6ZU64 1925 aaKnown RBP12.3□□□□□ -0.44
PRKCA-204ENST00000583361 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
PRKCA-204ENST00000583361 MAST1Q9Y2H9 1570 aa12.29□□□□□ -0.44
PRKCA-204ENST00000583361 ZMYM3Q14202 1370 aa12.27□□□□□ -0.45
PRKCA-204ENST00000583361 FGD6Q6ZV73 1430 aa12.26□□□□□ -0.45
PRKCA-204ENST00000583361 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
PRKCA-204ENST00000583361 FAM50AQ14320 339 aaKnown RBP12.25□□□□□ -0.45
PRKCA-204ENST00000583361 MYO3AQ8NEV4 1616 aa12.25□□□□□ -0.45
PRKCA-204ENST00000583361 EIF2AK4Q9P2K8 1649 aaKnown RBP12.25□□□□□ -0.45
PRKCA-204ENST00000583361 CEP152O94986 1710 aa12.25□□□□□ -0.45
PRKCA-204ENST00000583361 STRCQ7RTU9 1775 aa12.24□□□□□ -0.45
PRKCA-204ENST00000583361 KDM5DQ9BY66 1539 aa12.24□□□□□ -0.45
PRKCA-204ENST00000583361 WASHC2CQ9Y4E1 1318 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms