RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 YEATS2Q9ULM3 1422 aa15.97■□□□□ 0.15
CDK5RAP3-227ENST00000583352 EFCAB2Q5VUJ9 269 aa15.95■□□□□ 0.14
CDK5RAP3-227ENST00000583352 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
CDK5RAP3-227ENST00000583352 LMTK3Q96Q04 1460 aa15.95■□□□□ 0.14
CDK5RAP3-227ENST00000583352 MYO5CQ9NQX4 1742 aa15.94■□□□□ 0.14
CDK5RAP3-227ENST00000583352 SIGLEC1Q9BZZ2 1709 aa15.92■□□□□ 0.14
CDK5RAP3-227ENST00000583352 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
CDK5RAP3-227ENST00000583352 KIF14Q15058 1648 aa15.92■□□□□ 0.14
CDK5RAP3-227ENST00000583352 MLECQ14165 292 aa15.91■□□□□ 0.14
CDK5RAP3-227ENST00000583352 FBXO41Q8TF61 875 aa15.91■□□□□ 0.14
CDK5RAP3-227ENST00000583352 CLIP1P30622 1438 aa15.91■□□□□ 0.14
CDK5RAP3-227ENST00000583352 TROQ12816 1431 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-227ENST00000583352 ATP10AO60312 1499 aa15.9■□□□□ 0.14
CDK5RAP3-227ENST00000583352 C9orf84Q5VXU9 1444 aa15.89■□□□□ 0.13
CDK5RAP3-227ENST00000583352 FER1L4A9Z1Z3 1794 aa15.89■□□□□ 0.13
CDK5RAP3-227ENST00000583352 ARHGAP5Q13017 1502 aa15.89■□□□□ 0.13
CDK5RAP3-227ENST00000583352 ZNF518AQ6AHZ1 1483 aa15.87■□□□□ 0.13
CDK5RAP3-227ENST00000583352 HSPA2P54652 639 aa15.86■□□□□ 0.13
CDK5RAP3-227ENST00000583352 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
CDK5RAP3-227ENST00000583352 ARHGEF12Q9NZN5 1544 aa15.85■□□□□ 0.13
CDK5RAP3-227ENST00000583352 MYT1LQ9UL68 1186 aa15.84■□□□□ 0.13
CDK5RAP3-227ENST00000583352 KDM5CP41229 1560 aa15.83■□□□□ 0.13
CDK5RAP3-227ENST00000583352 AFAP1Q8N556 730 aa15.83■□□□□ 0.12
CDK5RAP3-227ENST00000583352 CCDC18Q5T9S5 1454 aa15.83■□□□□ 0.12
CDK5RAP3-227ENST00000583352 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
CDK5RAP3-227ENST00000583352 CDC42BPBQ9Y5S2 1711 aa15.8■□□□□ 0.12
CDK5RAP3-227ENST00000583352 PREX2Q70Z35 1606 aa15.79■□□□□ 0.12
CDK5RAP3-227ENST00000583352 DIP2CQ9Y2E4 1556 aa15.79■□□□□ 0.12
CDK5RAP3-227ENST00000583352 PREX1Q8TCU6 1659 aa15.78■□□□□ 0.12
CDK5RAP3-227ENST00000583352 REREQ9P2R6 1566 aa15.78■□□□□ 0.12
CDK5RAP3-227ENST00000583352 MLH3Q9UHC1 1453 aa15.78■□□□□ 0.12
CDK5RAP3-227ENST00000583352 CEBPAP49715 358 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-227ENST00000583352 ABCC1P33527 1531 aa15.77■□□□□ 0.11
CDK5RAP3-227ENST00000583352 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
CDK5RAP3-227ENST00000583352 TRAPPC8Q9Y2L5 1435 aa15.76■□□□□ 0.11
CDK5RAP3-227ENST00000583352 ABCA6Q8N139 1617 aa15.76■□□□□ 0.11
CDK5RAP3-227ENST00000583352 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
CDK5RAP3-227ENST00000583352 CDC42BPAQ5VT25 1732 aa15.73■□□□□ 0.11
CDK5RAP3-227ENST00000583352 AGLP35573 1532 aa15.73■□□□□ 0.11
CDK5RAP3-227ENST00000583352 UHRF1BP1Q6BDS2 1440 aa15.72■□□□□ 0.11
CDK5RAP3-227ENST00000583352 CERKQ8TCT0 537 aa15.72■□□□□ 0.11
CDK5RAP3-227ENST00000583352 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-227ENST00000583352 SETD1BQ9UPS6 1966 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-227ENST00000583352 ZNF777Q9ULD5 760 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-227ENST00000583352 KIDINS220Q9ULH0 1771 aa15.7■□□□□ 0.1
CDK5RAP3-227ENST00000583352 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
CDK5RAP3-227ENST00000583352 C3P01024 1663 aa15.68■□□□□ 0.1
CDK5RAP3-227ENST00000583352 SAMD9LQ8IVG5 1584 aa15.67■□□□□ 0.1
CDK5RAP3-227ENST00000583352 GPATCH8Q9UKJ3 1502 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-227ENST00000583352 CNTLNQ9NXG0 1405 aa15.67■□□□□ 0.1
CDK5RAP3-227ENST00000583352 SYCP2Q9BX26 1530 aa15.66■□□□□ 0.1
CDK5RAP3-227ENST00000583352 STRCQ7RTU9 1775 aa15.65■□□□□ 0.1
CDK5RAP3-227ENST00000583352 SPAG9O60271 1321 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-227ENST00000583352 PLEKHH2Q8IVE3 1493 aa15.64■□□□□ 0.09
CDK5RAP3-227ENST00000583352 CCNB3Q8WWL7 1395 aa15.63■□□□□ 0.09
CDK5RAP3-227ENST00000583352 HNRNPMP52272 730 aaKnown RBP eCLIP15.63■□□□□ 0.093e-14■■□□□ 13.7
CDK5RAP3-227ENST00000583352 CFDP1Q9UEE9 299 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP3-227ENST00000583352 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
CDK5RAP3-227ENST00000583352 KIAA1107Q9UPP5 1409 aa15.62■□□□□ 0.09
CDK5RAP3-227ENST00000583352 ATP7AQ04656 1500 aa15.61■□□□□ 0.09
CDK5RAP3-227ENST00000583352 PTPRTO14522 1441 aa15.6■□□□□ 0.09
CDK5RAP3-227ENST00000583352 MROH2AA6NES4 1674 aa15.6■□□□□ 0.09
CDK5RAP3-227ENST00000583352 SUPT6HQ7KZ85 1726 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-227ENST00000583352 NPATQ14207 1427 aa15.59■□□□□ 0.09
CDK5RAP3-227ENST00000583352 INO80Q9ULG1 1556 aaPredicted RBP15.58■□□□□ 0.09
CDK5RAP3-227ENST00000583352 A2MP01023 1474 aa15.58■□□□□ 0.08
CDK5RAP3-227ENST00000583352 ZMYM3Q14202 1370 aa15.57■□□□□ 0.08
CDK5RAP3-227ENST00000583352 PLXNC1O60486 1568 aa15.57■□□□□ 0.08
CDK5RAP3-227ENST00000583352 NCOA1Q15788 1441 aa15.56■□□□□ 0.08
CDK5RAP3-227ENST00000583352 EHBP1L1Q8N3D4 1523 aa15.56■□□□□ 0.08
CDK5RAP3-227ENST00000583352 CLTCQ00610 1675 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-227ENST00000583352 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
CDK5RAP3-227ENST00000583352 ADGBQ8N7X0 1667 aa15.54■□□□□ 0.08
CDK5RAP3-227ENST00000583352 GGT6Q6P531 493 aa15.53■□□□□ 0.08
CDK5RAP3-227ENST00000583352 CAMSAP1Q5T5Y3 1602 aa15.53■□□□□ 0.08
CDK5RAP3-227ENST00000583352 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
CDK5RAP3-227ENST00000583352 ZNF644Q9H582 1327 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-227ENST00000583352 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
CDK5RAP3-227ENST00000583352 MBD5Q9P267 1494 aa15.5■□□□□ 0.07
CDK5RAP3-227ENST00000583352 RTEL1-TNFRSF6BF6WH68 1400 aa15.5■□□□□ 0.07
CDK5RAP3-227ENST00000583352 PTPRKQ15262 1439 aa15.5■□□□□ 0.07
CDK5RAP3-227ENST00000583352 LTBP4Q8N2S1 1624 aa15.5■□□□□ 0.07
CDK5RAP3-227ENST00000583352 MYO3AQ8NEV4 1616 aa15.5■□□□□ 0.07
CDK5RAP3-227ENST00000583352 ZNF142P52746 1687 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-227ENST00000583352 IQSEC2Q5JU85 1478 aa15.48■□□□□ 0.07
CDK5RAP3-227ENST00000583352 NCKAP5LQ9HCH0 1330 aa15.47■□□□□ 0.07
CDK5RAP3-227ENST00000583352 PLA2R1Q13018 1463 aa15.47■□□□□ 0.07
CDK5RAP3-227ENST00000583352 CEP170BQ9Y4F5 1589 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-227ENST00000583352 DHX29Q7Z478 1369 aaKnown RBP15.47■□□□□ 0.07
CDK5RAP3-227ENST00000583352 PKD2Q13563 968 aa15.46■□□□□ 0.07
CDK5RAP3-227ENST00000583352 NCOA2Q15596 1464 aa15.46■□□□□ 0.06
CDK5RAP3-227ENST00000583352 CCDC141Q6ZP82 1450 aa15.45■□□□□ 0.06
CDK5RAP3-227ENST00000583352 RSPH4AQ5TD94 716 aa15.44■□□□□ 0.06
CDK5RAP3-227ENST00000583352 CAMSAP2Q08AD1 1489 aa15.44■□□□□ 0.06
CDK5RAP3-227ENST00000583352 DISP3Q9P2K9 1392 aa15.43■□□□□ 0.06
CDK5RAP3-227ENST00000583352 A2ML1A8K2U0 1454 aa15.42■□□□□ 0.06
CDK5RAP3-227ENST00000583352 TCOF1Q13428 1488 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-227ENST00000583352 KIF3BO15066 747 aa15.42■□□□□ 0.06
CDK5RAP3-227ENST00000583352 ZNF335Q9H4Z2 1342 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-227ENST00000583352 FAM135AQ9P2D6 1515 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms