RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 MTUS2Q5JR59 1369 aa28.71■■■□□ 2.19
ERBB2-211ENST00000582648 AEBP2Q6ZN18 517 aaPredicted RBP28.7■■■□□ 2.18
ERBB2-211ENST00000582648 EHBP1L1Q8N3D4 1523 aa28.68■■■□□ 2.18
ERBB2-211ENST00000582648 EFCAB2Q5VUJ9 269 aa28.67■■■□□ 2.18
ERBB2-211ENST00000582648 SCAPERQ9BY12 1400 aa28.66■■■□□ 2.18
ERBB2-211ENST00000582648 TIAM1Q13009 1591 aa28.64■■■□□ 2.18
ERBB2-211ENST00000582648 POGZQ7Z3K3 1410 aa28.63■■■□□ 2.17
ERBB2-211ENST00000582648 KDM4FA0A1W2PPD8 638 aa28.62■■■□□ 2.17
ERBB2-211ENST00000582648 ARHGEF40Q8TER5 1519 aa28.62■■■□□ 2.17
ERBB2-211ENST00000582648 ZMYM4Q5VZL5 1548 aa28.61■■■□□ 2.17
ERBB2-211ENST00000582648 ABCC1P33527 1531 aa28.58■■■□□ 2.17
ERBB2-211ENST00000582648 GPATCH8Q9UKJ3 1502 aaKnown RBP28.58■■■□□ 2.17
ERBB2-211ENST00000582648 ZFYVE16Q7Z3T8 1539 aa28.56■■■□□ 2.16
ERBB2-211ENST00000582648 ITSN2Q9NZM3 1697 aa28.56■■■□□ 2.16
ERBB2-211ENST00000582648 CCNB3Q8WWL7 1395 aa28.55■■■□□ 2.16
ERBB2-211ENST00000582648 SUPT6HQ7KZ85 1726 aaKnown RBP28.55■■■□□ 2.16
ERBB2-211ENST00000582648 SAMD9LQ8IVG5 1584 aa28.54■■■□□ 2.16
ERBB2-211ENST00000582648 YEATS2Q9ULM3 1422 aa28.52■■■□□ 2.16
ERBB2-211ENST00000582648 ZNF777Q9ULD5 760 aaPredicted RBP28.52■■■□□ 2.16
ERBB2-211ENST00000582648 ZNF518AQ6AHZ1 1483 aa28.52■■■□□ 2.16
ERBB2-211ENST00000582648 ARHGEF12Q9NZN5 1544 aa28.5■■■□□ 2.15
ERBB2-211ENST00000582648 KDM5CP41229 1560 aa28.5■■■□□ 2.15
ERBB2-211ENST00000582648 NCOA2Q15596 1464 aa28.48■■■□□ 2.15
ERBB2-211ENST00000582648 LRRC9Q6ZRR7 1453 aa28.48■■■□□ 2.15
ERBB2-211ENST00000582648 MAGI2Q86UL8 1455 aa28.48■■■□□ 2.15
ERBB2-211ENST00000582648 SYCP2Q9BX26 1530 aa28.48■■■□□ 2.15
ERBB2-211ENST00000582648 HECW2Q9P2P5 1572 aa28.46■■■□□ 2.15
ERBB2-211ENST00000582648 TRAPPC8Q9Y2L5 1435 aa28.46■■■□□ 2.15
ERBB2-211ENST00000582648 AFAP1Q8N556 730 aa28.46■■■□□ 2.15
ERBB2-211ENST00000582648 CFDP1Q9UEE9 299 aaPredicted RBP28.46■■■□□ 2.15
ERBB2-211ENST00000582648 SIGLEC1Q9BZZ2 1709 aa28.45■■■□□ 2.14
ERBB2-211ENST00000582648 ARID4BQ4LE39 1312 aaPredicted RBP28.44■■■□□ 2.14
ERBB2-211ENST00000582648 MAP3K1Q13233 1512 aa28.44■■■□□ 2.14
ERBB2-211ENST00000582648 MYT1LQ9UL68 1186 aa28.41■■■□□ 2.14
ERBB2-211ENST00000582648 BCORL1Q5H9F3 1711 aa28.4■■■□□ 2.14
ERBB2-211ENST00000582648 KANK4Q5T7N3 995 aaPredicted RBP28.4■■■□□ 2.14
ERBB2-211ENST00000582648 ABCA6Q8N139 1617 aa28.38■■■□□ 2.13
ERBB2-211ENST00000582648 DIP2CQ9Y2E4 1556 aa28.37■■■□□ 2.13
ERBB2-211ENST00000582648 PLEKHH2Q8IVE3 1493 aa28.37■■■□□ 2.13
ERBB2-211ENST00000582648 ADAMTSL3P82987 1691 aa28.36■■■□□ 2.13
ERBB2-211ENST00000582648 ATP10AO60312 1499 aa28.35■■■□□ 2.13
ERBB2-211ENST00000582648 HNRNPMP52272 730 aaKnown RBP eCLIP28.35■■■□□ 2.13
ERBB2-211ENST00000582648 APLP2Q06481 763 aa28.35■■■□□ 2.13
ERBB2-211ENST00000582648 C9orf84Q5VXU9 1444 aa28.35■■■□□ 2.13
ERBB2-211ENST00000582648 MADDQ8WXG6 1647 aa28.34■■■□□ 2.13
ERBB2-211ENST00000582648 ZNF644Q9H582 1327 aaPredicted RBP28.34■■■□□ 2.13
ERBB2-211ENST00000582648 KIDINS220Q9ULH0 1771 aa28.34■■■□□ 2.13
ERBB2-211ENST00000582648 MLH3Q9UHC1 1453 aa28.34■■■□□ 2.13
ERBB2-211ENST00000582648 KIAA1107Q9UPP5 1409 aa28.32■■■□□ 2.12
ERBB2-211ENST00000582648 CAMSAP2Q08AD1 1489 aa28.31■■■□□ 2.12
ERBB2-211ENST00000582648 RIMS1Q86UR5 1692 aaKnown RBP28.27■■■□□ 2.12
ERBB2-211ENST00000582648 INO80Q9ULG1 1556 aaPredicted RBP28.27■■■□□ 2.12
ERBB2-211ENST00000582648 MLECQ14165 292 aa28.26■■■□□ 2.11
ERBB2-211ENST00000582648 ATP7AQ04656 1500 aa28.26■■■□□ 2.11
ERBB2-211ENST00000582648 SPAG9O60271 1321 aaKnown RBP28.25■■■□□ 2.11
ERBB2-211ENST00000582648 MBD5Q9P267 1494 aa28.24■■■□□ 2.11
ERBB2-211ENST00000582648 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
ERBB2-211ENST00000582648 FER1L4A9Z1Z3 1794 aa28.23■■■□□ 2.11
ERBB2-211ENST00000582648 MYOM3Q5VTT5 1437 aa28.22■■■□□ 2.11
ERBB2-211ENST00000582648 PTPRMP28827 1452 aa28.21■■■□□ 2.11
ERBB2-211ENST00000582648 CCDC141Q6ZP82 1450 aa28.19■■■□□ 2.1
ERBB2-211ENST00000582648 ARHGEF5Q12774 1597 aa28.14■■■□□ 2.1
ERBB2-211ENST00000582648 MIA2Q96PC5 1412 aa28.13■■■□□ 2.09
ERBB2-211ENST00000582648 AGLP35573 1532 aa28.13■■■□□ 2.09
ERBB2-211ENST00000582648 PLPPR3Q6T4P5 718 aa28.12■■■□□ 2.09
ERBB2-211ENST00000582648 ADGBQ8N7X0 1667 aa28.12■■■□□ 2.09
ERBB2-211ENST00000582648 PLXNC1O60486 1568 aa28.1■■■□□ 2.09
ERBB2-211ENST00000582648 PTPN23Q9H3S7 1636 aa28.1■■■□□ 2.09
ERBB2-211ENST00000582648 A2MP01023 1474 aa28.08■■■□□ 2.09
ERBB2-211ENST00000582648 RTEL1-TNFRSF6BF6WH68 1400 aa28.07■■■□□ 2.08
ERBB2-211ENST00000582648 FGD6Q6ZV73 1430 aa28.04■■■□□ 2.08
ERBB2-211ENST00000582648 RSPH4AQ5TD94 716 aa28.02■■■□□ 2.08
ERBB2-211ENST00000582648 CROCC2H7BZ55 1655 aa28■■■□□ 2.07
ERBB2-211ENST00000582648 MAST1Q9Y2H9 1570 aa27.99■■■□□ 2.07
ERBB2-211ENST00000582648 TSPY4P0CV99 314 aa27.98■■■□□ 2.07
ERBB2-211ENST00000582648 TSPY10P0CW01 314 aa27.98■■■□□ 2.07
ERBB2-211ENST00000582648 TCOF1Q13428 1488 aaKnown RBP27.97■■■□□ 2.07
ERBB2-211ENST00000582648 PPARGC1BQ86YN6 1023 aaKnown RBP27.95■■■□□ 2.06
ERBB2-211ENST00000582648 DNMT1P26358 1616 aaKnown RBP27.95■■■□□ 2.06
ERBB2-211ENST00000582648 ESF1Q9H501 851 aaKnown RBP27.94■■■□□ 2.06
ERBB2-211ENST00000582648 C3P01024 1663 aa27.94■■■□□ 2.06
ERBB2-211ENST00000582648 CEBPAP49715 358 aaPredicted RBP27.93■■■□□ 2.06
ERBB2-211ENST00000582648 DHX29Q7Z478 1369 aaKnown RBP27.93■■■□□ 2.06
ERBB2-211ENST00000582648 CLTCQ00610 1675 aaKnown RBP27.92■■■□□ 2.06
ERBB2-211ENST00000582648 ABCC5O15440 1437 aa27.91■■■□□ 2.06
ERBB2-211ENST00000582648 DAPK1P53355 1430 aa27.91■■■□□ 2.06
ERBB2-211ENST00000582648 GGT6Q6P531 493 aa27.9■■■□□ 2.06
ERBB2-211ENST00000582648 SHANK2Q9UPX8 1470 aa27.89■■■□□ 2.06
ERBB2-211ENST00000582648 CNTLNQ9NXG0 1405 aa27.88■■■□□ 2.05
ERBB2-211ENST00000582648 LMTK3Q96Q04 1460 aa27.88■■■□□ 2.05
ERBB2-211ENST00000582648 MROH2AA6NES4 1674 aa27.87■■■□□ 2.05
ERBB2-211ENST00000582648 FAM50AQ14320 339 aaKnown RBP27.86■■■□□ 2.05
ERBB2-211ENST00000582648 KIF3BO15066 747 aa27.84■■■□□ 2.05
ERBB2-211ENST00000582648 PREX1Q8TCU6 1659 aa27.84■■■□□ 2.05
ERBB2-211ENST00000582648 KIF15Q9NS87 1388 aa27.8■■■□□ 2.04
ERBB2-211ENST00000582648 DUOX2Q9NRD8 1548 aa27.8■■■□□ 2.04
ERBB2-211ENST00000582648 EIF2AK4Q9P2K8 1649 aaKnown RBP27.8■■■□□ 2.04
ERBB2-211ENST00000582648 CHIC2Q9UKJ5 165 aa27.78■■■□□ 2.04
ERBB2-211ENST00000582648 RNF17Q9BXT8 1623 aaKnown RBP27.78■■■□□ 2.04
ERBB2-211ENST00000582648 KDM5DQ9BY66 1539 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms