RNA–Protein interactions for RNA: ENST00000582509.1

TRAPPC8-209, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-209ENST00000582509 SLAIN1Q8ND83 568 aa13.11□□□□□ -0.31
TRAPPC8-209ENST00000582509 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
TRAPPC8-209ENST00000582509 GPHNQ9NQX3 736 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC8-209ENST00000582509 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
TRAPPC8-209ENST00000582509 CRISPLD2Q9H0B8 497 aa13.07□□□□□ -0.32
TRAPPC8-209ENST00000582509 KIF3CO14782 793 aa13.05□□□□□ -0.32
TRAPPC8-209ENST00000582509 CADPS2Q86UW7 1296 aa13.05□□□□□ -0.32
TRAPPC8-209ENST00000582509 C2orf72A6NCS6 295 aa13.04□□□□□ -0.32
TRAPPC8-209ENST00000582509 TMEM92Q6UXU6 159 aa13.04□□□□□ -0.32
TRAPPC8-209ENST00000582509 NCKAP5LQ9HCH0 1330 aa13.03□□□□□ -0.32
TRAPPC8-209ENST00000582509 SNPHO15079 494 aa13.02□□□□□ -0.33
TRAPPC8-209ENST00000582509 FOXK1P85037 733 aa13.02□□□□□ -0.33
TRAPPC8-209ENST00000582509 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.33
TRAPPC8-209ENST00000582509 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
TRAPPC8-209ENST00000582509 WDR70Q9NW82 654 aa13.02□□□□□ -0.33
TRAPPC8-209ENST00000582509 MFSD10Q14728 455 aa13□□□□□ -0.33
TRAPPC8-209ENST00000582509 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
TRAPPC8-209ENST00000582509 PPP1R15BQ5SWA1 713 aa12.97□□□□□ -0.33
TRAPPC8-209ENST00000582509 DSG2Q14126 1118 aa12.96□□□□□ -0.33
TRAPPC8-209ENST00000582509 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
TRAPPC8-209ENST00000582509 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
TRAPPC8-209ENST00000582509 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
TRAPPC8-209ENST00000582509 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
TRAPPC8-209ENST00000582509 SLC34A2O95436 690 aa12.89□□□□□ -0.35
TRAPPC8-209ENST00000582509 ZNF710Q8N1W2 664 aa12.87□□□□□ -0.35
TRAPPC8-209ENST00000582509 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
TRAPPC8-209ENST00000582509 E2F4Q16254 413 aa12.86□□□□□ -0.35
TRAPPC8-209ENST00000582509 TBC1D12O60347 775 aa12.85□□□□□ -0.35
TRAPPC8-209ENST00000582509 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
TRAPPC8-209ENST00000582509 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
TRAPPC8-209ENST00000582509 HOXB3P14651 431 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC8-209ENST00000582509 KDM2AQ9Y2K7 1162 aa12.83□□□□□ -0.36
TRAPPC8-209ENST00000582509 PTCD2Q8WV60 388 aaKnown RBP12.82□□□□□ -0.36
TRAPPC8-209ENST00000582509 OXER1Q8TDS5 423 aa12.77□□□□□ -0.37
TRAPPC8-209ENST00000582509 ARIH1Q9Y4X5 557 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC8-209ENST00000582509 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC8-209ENST00000582509 MAP3K9P80192 1104 aa12.75□□□□□ -0.37
TRAPPC8-209ENST00000582509 FAM163AQ96GL9 167 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC8-209ENST00000582509 PCDHGA4Q9Y5G9 962 aa12.75□□□□□ -0.37
TRAPPC8-209ENST00000582509 ARHGEF1Q92888 912 aaKnown RBP12.74□□□□□ -0.37
TRAPPC8-209ENST00000582509 EMILIN3Q9NT22 766 aa12.74□□□□□ -0.37
TRAPPC8-209ENST00000582509 HOXB1P14653 301 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC8-209ENST00000582509 UPF1Q92900 1129 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAPPC8-209ENST00000582509 GPR153Q6NV75 609 aa12.72□□□□□ -0.37
TRAPPC8-209ENST00000582509 ST18O60284 1047 aa12.71□□□□□ -0.37
TRAPPC8-209ENST00000582509 KCNV2Q8TDN2 545 aa12.7□□□□□ -0.38
TRAPPC8-209ENST00000582509 ARSIQ5FYB1 569 aa12.69□□□□□ -0.38
TRAPPC8-209ENST00000582509 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC8-209ENST00000582509 DPYSL4O14531 572 aa12.67□□□□□ -0.38
TRAPPC8-209ENST00000582509 EVI5O60447 810 aa12.64□□□□□ -0.39
TRAPPC8-209ENST00000582509 NUDT7P0C024 238 aa12.63□□□□□ -0.39
TRAPPC8-209ENST00000582509 PDIA6Q15084 440 aa12.63□□□□□ -0.39
TRAPPC8-209ENST00000582509 PSDA5PKW4 1024 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC8-209ENST00000582509 EMP3P54852 163 aa12.62□□□□□ -0.39
TRAPPC8-209ENST00000582509 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC8-209ENST00000582509 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
TRAPPC8-209ENST00000582509 KHSRPQ92945 711 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAPPC8-209ENST00000582509 LCE2DQ5TA82 110 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC8-209ENST00000582509 ERBB3P21860 1342 aa12.57□□□□□ -0.4
TRAPPC8-209ENST00000582509 PTGER2P43116 358 aa12.56□□□□□ -0.4
TRAPPC8-209ENST00000582509 MARVELD3Q96A59 401 aa12.56□□□□□ -0.4
TRAPPC8-209ENST00000582509 LHX6Q9UPM6 363 aa12.55□□□□□ -0.4
TRAPPC8-209ENST00000582509 NBR1Q14596 966 aa12.52□□□□□ -0.41
TRAPPC8-209ENST00000582509 JPH4Q96JJ6 628 aa12.52□□□□□ -0.41
TRAPPC8-209ENST00000582509 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
TRAPPC8-209ENST00000582509 FAM205CA6NFA0 338 aa12.5□□□□□ -0.41
TRAPPC8-209ENST00000582509 PHF14O94880 888 aa12.5□□□□□ -0.41
TRAPPC8-209ENST00000582509 VARS2Q5ST30 1063 aaKnown RBP12.49□□□□□ -0.41
TRAPPC8-209ENST00000582509 SMYD5Q6GMV2 418 aa12.49□□□□□ -0.41
TRAPPC8-209ENST00000582509 EPAS1Q99814 870 aa12.49□□□□□ -0.41
TRAPPC8-209ENST00000582509 ZNF454Q8N9F8 522 aa12.48□□□□□ -0.41
TRAPPC8-209ENST00000582509 FBXW7Q969H0 707 aa12.48□□□□□ -0.41
TRAPPC8-209ENST00000582509 TULP1O00294 542 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC8-209ENST00000582509 FOSBP53539 338 aa12.47□□□□□ -0.41
TRAPPC8-209ENST00000582509 POTEGQ6S5H5 508 aa12.46□□□□□ -0.41
TRAPPC8-209ENST00000582509 HS3ST6Q96QI5 342 aa12.46□□□□□ -0.41
TRAPPC8-209ENST00000582509 POTEMA6NI47 508 aa12.45□□□□□ -0.42
TRAPPC8-209ENST00000582509 TYW1BQ6NUM6 668 aa12.45□□□□□ -0.42
TRAPPC8-209ENST00000582509 DDX12PQ92771 950 aa12.45□□□□□ -0.42
TRAPPC8-209ENST00000582509 SEMA3EO15041 775 aa12.44□□□□□ -0.42
TRAPPC8-209ENST00000582509 ZDHHC16Q969W1 377 aa12.44□□□□□ -0.42
TRAPPC8-209ENST00000582509 TESPA1A2RU30 521 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC8-209ENST00000582509 GRXCR2A6NFK2 248 aa12.43□□□□□ -0.42
TRAPPC8-209ENST00000582509 KCNH8Q96L42 1107 aa12.43□□□□□ -0.42
TRAPPC8-209ENST00000582509 PCDHGA10Q9Y5H3 936 aa12.43□□□□□ -0.42
TRAPPC8-209ENST00000582509 ZNF687Q8N1G0 1237 aa12.42□□□□□ -0.42
TRAPPC8-209ENST00000582509 BCANQ96GW7 911 aa12.42□□□□□ -0.42
TRAPPC8-209ENST00000582509 PBX2P40425 430 aa12.41□□□□□ -0.42
TRAPPC8-209ENST00000582509 PLSCR2Q9NRY7 297 aa12.41□□□□□ -0.42
TRAPPC8-209ENST00000582509 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC8-209ENST00000582509 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
TRAPPC8-209ENST00000582509 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC8-209ENST00000582509 PCDH10Q9P2E7 1040 aa12.37□□□□□ -0.43
TRAPPC8-209ENST00000582509 OSBPP22059 807 aa12.36□□□□□ -0.43
TRAPPC8-209ENST00000582509 PTPREP23469 700 aa12.35□□□□□ -0.43
TRAPPC8-209ENST00000582509 ARHGAP33O14559 1287 aa12.34□□□□□ -0.43
TRAPPC8-209ENST00000582509 POTEB3A0JP26 581 aa12.33□□□□□ -0.44
TRAPPC8-209ENST00000582509 MAP3K7O43318 606 aa12.33□□□□□ -0.44
TRAPPC8-209ENST00000582509 POTEBQ6S5H4 581 aa12.33□□□□□ -0.44
TRAPPC8-209ENST00000582509 ADAM33Q9BZ11 813 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms