RNA–Protein interactions for RNA: ENST00000581339.1

RIOK3-206, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-206ENST00000581339 KDM2AQ9Y2K7 1162 aa13.72□□□□□ -0.21
RIOK3-206ENST00000581339 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
RIOK3-206ENST00000581339 CRISPLD2Q9H0B8 497 aa13.68□□□□□ -0.22
RIOK3-206ENST00000581339 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
RIOK3-206ENST00000581339 PDE4AP27815 886 aa13.67□□□□□ -0.22
RIOK3-206ENST00000581339 POTEJP0CG39 1038 aa13.65□□□□□ -0.22
RIOK3-206ENST00000581339 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
RIOK3-206ENST00000581339 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.64□□□□□ -0.23
RIOK3-206ENST00000581339 NACADO15069 1562 aa13.63□□□□□ -0.23
RIOK3-206ENST00000581339 LARP6Q9BRS8 491 aaKnown RBP13.63□□□□□ -0.23
RIOK3-206ENST00000581339 WDR70Q9NW82 654 aa13.63□□□□□ -0.23
RIOK3-206ENST00000581339 MAMSTRQ6ZN01 415 aa13.62□□□□□ -0.23
RIOK3-206ENST00000581339 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
RIOK3-206ENST00000581339 TMEM92Q6UXU6 159 aa13.6□□□□□ -0.23
RIOK3-206ENST00000581339 SCUBE2Q9NQ36 999 aa13.6□□□□□ -0.23
RIOK3-206ENST00000581339 C2orf72A6NCS6 295 aa13.59□□□□□ -0.23
RIOK3-206ENST00000581339 DDX27Q96GQ7 796 aaKnown RBP13.59□□□□□ -0.23
RIOK3-206ENST00000581339 KIF3CO14782 793 aa13.58□□□□□ -0.24
RIOK3-206ENST00000581339 MFSD10Q14728 455 aa13.58□□□□□ -0.24
RIOK3-206ENST00000581339 PPP1R15BQ5SWA1 713 aa13.55□□□□□ -0.24
RIOK3-206ENST00000581339 LHX8Q68G74 356 aa13.55□□□□□ -0.24
RIOK3-206ENST00000581339 FOXK1P85037 733 aa13.53□□□□□ -0.24
RIOK3-206ENST00000581339 DSG2Q14126 1118 aa13.53□□□□□ -0.24
RIOK3-206ENST00000581339 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
RIOK3-206ENST00000581339 PLPP6Q8IY26 295 aa13.49□□□□□ -0.25
RIOK3-206ENST00000581339 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
RIOK3-206ENST00000581339 E2F4Q16254 413 aa13.48□□□□□ -0.25
RIOK3-206ENST00000581339 P3H3Q8IVL6 736 aa13.47□□□□□ -0.25
RIOK3-206ENST00000581339 OTUD5Q96G74 571 aa13.46□□□□□ -0.25
RIOK3-206ENST00000581339 CAMK2BQ13554 666 aa13.43□□□□□ -0.26
RIOK3-206ENST00000581339 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
RIOK3-206ENST00000581339 BICRAQ9NZM4 1560 aa13.43□□□□□ -0.26
RIOK3-206ENST00000581339 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
RIOK3-206ENST00000581339 EMILIN3Q9NT22 766 aa13.36□□□□□ -0.27
RIOK3-206ENST00000581339 ARHGEF1Q92888 912 aaKnown RBP13.35□□□□□ -0.27
RIOK3-206ENST00000581339 SLC34A2O95436 690 aa13.33□□□□□ -0.28
RIOK3-206ENST00000581339 ARIH1Q9Y4X5 557 aaPredicted RBP13.33□□□□□ -0.28
RIOK3-206ENST00000581339 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
RIOK3-206ENST00000581339 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
RIOK3-206ENST00000581339 UPF1Q92900 1129 aaKnown RBP eCLIP13.32□□□□□ -0.28
RIOK3-206ENST00000581339 SNPHO15079 494 aa13.31□□□□□ -0.28
RIOK3-206ENST00000581339 OXER1Q8TDS5 423 aa13.31□□□□□ -0.28
RIOK3-206ENST00000581339 DPYSL4O14531 572 aa13.29□□□□□ -0.28
RIOK3-206ENST00000581339 HOXB3P14651 431 aaPredicted RBP13.29□□□□□ -0.28
RIOK3-206ENST00000581339 NBR1Q14596 966 aa13.29□□□□□ -0.28
RIOK3-206ENST00000581339 PTCD2Q8WV60 388 aaKnown RBP13.29□□□□□ -0.28
RIOK3-206ENST00000581339 RIMBP2O15034 1052 aa13.27□□□□□ -0.29
RIOK3-206ENST00000581339 TBC1D12O60347 775 aa13.27□□□□□ -0.29
RIOK3-206ENST00000581339 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
RIOK3-206ENST00000581339 BCANQ96GW7 911 aa13.27□□□□□ -0.29
RIOK3-206ENST00000581339 ZNF710Q8N1W2 664 aa13.25□□□□□ -0.29
RIOK3-206ENST00000581339 PCDHGA4Q9Y5G9 962 aa13.24□□□□□ -0.29
RIOK3-206ENST00000581339 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
RIOK3-206ENST00000581339 ZSWIM6Q9HCJ5 1215 aa13.23□□□□□ -0.29
RIOK3-206ENST00000581339 ZNF316A6NFI3 1004 aaPredicted RBP13.21□□□□□ -0.29
RIOK3-206ENST00000581339 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
RIOK3-206ENST00000581339 PDIA6Q15084 440 aa13.21□□□□□ -0.29
RIOK3-206ENST00000581339 SCRIBQ14160 1630 aa13.19□□□□□ -0.3
RIOK3-206ENST00000581339 EVI5O60447 810 aa13.17□□□□□ -0.3
RIOK3-206ENST00000581339 ARSIQ5FYB1 569 aa13.17□□□□□ -0.3
RIOK3-206ENST00000581339 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
RIOK3-206ENST00000581339 SEMA3EO15041 775 aa13.15□□□□□ -0.3
RIOK3-206ENST00000581339 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
RIOK3-206ENST00000581339 NUDT7P0C024 238 aa13.12□□□□□ -0.31
RIOK3-206ENST00000581339 HOXB1P14653 301 aaPredicted RBP13.12□□□□□ -0.31
RIOK3-206ENST00000581339 SHROOM4Q9ULL8 1493 aa13.11□□□□□ -0.31
RIOK3-206ENST00000581339 CC2D2AQ9P2K1 1620 aa13.11□□□□□ -0.31
RIOK3-206ENST00000581339 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
RIOK3-206ENST00000581339 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
RIOK3-206ENST00000581339 KDM4FA0A1W2PPD8 638 aa13.1□□□□□ -0.31
RIOK3-206ENST00000581339 CECR2Q9BXF3 1484 aa13.09□□□□□ -0.31
RIOK3-206ENST00000581339 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
RIOK3-206ENST00000581339 ST18O60284 1047 aa13.07□□□□□ -0.32
RIOK3-206ENST00000581339 PTGER2P43116 358 aa13.07□□□□□ -0.32
RIOK3-206ENST00000581339 FAM163AQ96GL9 167 aaPredicted RBP13.07□□□□□ -0.32
RIOK3-206ENST00000581339 MLLT3P42568 568 aaPredicted RBP13.06□□□□□ -0.32
RIOK3-206ENST00000581339 SMYD5Q6GMV2 418 aa13.06□□□□□ -0.32
RIOK3-206ENST00000581339 EIF4G1Q04637 1599 aaKnown RBP13.06□□□□□ -0.32
RIOK3-206ENST00000581339 DDX12PQ92771 950 aa13.05□□□□□ -0.32
RIOK3-206ENST00000581339 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
RIOK3-206ENST00000581339 LHX6Q9UPM6 363 aa13.02□□□□□ -0.33
RIOK3-206ENST00000581339 JPH4Q96JJ6 628 aa13.01□□□□□ -0.33
RIOK3-206ENST00000581339 PHF14O94880 888 aa12.99□□□□□ -0.33
RIOK3-206ENST00000581339 PSDA5PKW4 1024 aaPredicted RBP12.98□□□□□ -0.33
RIOK3-206ENST00000581339 FOSBP53539 338 aa12.98□□□□□ -0.33
RIOK3-206ENST00000581339 EMP3P54852 163 aa12.98□□□□□ -0.33
RIOK3-206ENST00000581339 ZNF454Q8N9F8 522 aa12.98□□□□□ -0.33
RIOK3-206ENST00000581339 EPAS1Q99814 870 aa12.98□□□□□ -0.33
RIOK3-206ENST00000581339 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
RIOK3-206ENST00000581339 PCDHGA10Q9Y5H3 936 aa12.97□□□□□ -0.33
RIOK3-206ENST00000581339 OSBPP22059 807 aa12.95□□□□□ -0.34
RIOK3-206ENST00000581339 LCE2DQ5TA82 110 aaPredicted RBP12.95□□□□□ -0.34
RIOK3-206ENST00000581339 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
RIOK3-206ENST00000581339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.95□□□□□ -0.34
RIOK3-206ENST00000581339 ERBB3P21860 1342 aa12.94□□□□□ -0.34
RIOK3-206ENST00000581339 LMOD2Q6P5Q4 547 aa12.94□□□□□ -0.34
RIOK3-206ENST00000581339 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
RIOK3-206ENST00000581339 PPP4R3BQ5MIZ7 849 aa12.93□□□□□ -0.34
RIOK3-206ENST00000581339 ZDHHC16Q969W1 377 aa12.92□□□□□ -0.34
RIOK3-206ENST00000581339 RBM26Q5T8P6 1007 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms