RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 CDC42BPAQ5VT25 1732 aa19.03■□□□□ 0.64
PPP4R1-219ENST00000581250 ARHGEF40Q8TER5 1519 aa19.01■□□□□ 0.63
PPP4R1-219ENST00000581250 SCAPERQ9BY12 1400 aa19■□□□□ 0.63
PPP4R1-219ENST00000581250 MTUS2Q5JR59 1369 aa19■□□□□ 0.63
PPP4R1-219ENST00000581250 POGZQ7Z3K3 1410 aa19■□□□□ 0.63
PPP4R1-219ENST00000581250 EFCAB2Q5VUJ9 269 aa18.99■□□□□ 0.63
PPP4R1-219ENST00000581250 ZMYM4Q5VZL5 1548 aa18.99■□□□□ 0.63
PPP4R1-219ENST00000581250 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
PPP4R1-219ENST00000581250 EHBP1L1Q8N3D4 1523 aa18.98■□□□□ 0.63
PPP4R1-219ENST00000581250 ZFYVE16Q7Z3T8 1539 aa18.95■□□□□ 0.62
PPP4R1-219ENST00000581250 TIAM1Q13009 1591 aa18.94■□□□□ 0.62
PPP4R1-219ENST00000581250 ABCC1P33527 1531 aa18.94■□□□□ 0.62
PPP4R1-219ENST00000581250 YEATS2Q9ULM3 1422 aa18.93■□□□□ 0.62
PPP4R1-219ENST00000581250 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
PPP4R1-219ENST00000581250 ZNF518AQ6AHZ1 1483 aa18.91■□□□□ 0.62
PPP4R1-219ENST00000581250 GPATCH8Q9UKJ3 1502 aaKnown RBP18.91■□□□□ 0.62
PPP4R1-219ENST00000581250 SAMD9LQ8IVG5 1584 aa18.91■□□□□ 0.62
PPP4R1-219ENST00000581250 SIGLEC1Q9BZZ2 1709 aa18.9■□□□□ 0.62
PPP4R1-219ENST00000581250 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
PPP4R1-219ENST00000581250 KDM5CP41229 1560 aa18.89■□□□□ 0.62
PPP4R1-219ENST00000581250 ZNF777Q9ULD5 760 aaPredicted RBP18.89■□□□□ 0.61
PPP4R1-219ENST00000581250 ARID4BQ4LE39 1312 aaPredicted RBP18.89■□□□□ 0.61
PPP4R1-219ENST00000581250 ARHGEF12Q9NZN5 1544 aa18.89■□□□□ 0.61
PPP4R1-219ENST00000581250 MAGI2Q86UL8 1455 aa18.88■□□□□ 0.61
PPP4R1-219ENST00000581250 SYCP2Q9BX26 1530 aa18.88■□□□□ 0.61
PPP4R1-219ENST00000581250 HECW2Q9P2P5 1572 aa18.88■□□□□ 0.61
PPP4R1-219ENST00000581250 SUPT6HQ7KZ85 1726 aaKnown RBP18.88■□□□□ 0.61
PPP4R1-219ENST00000581250 BCORL1Q5H9F3 1711 aa18.87■□□□□ 0.61
PPP4R1-219ENST00000581250 TRAPPC8Q9Y2L5 1435 aa18.87■□□□□ 0.61
PPP4R1-219ENST00000581250 AFAP1Q8N556 730 aa18.86■□□□□ 0.61
PPP4R1-219ENST00000581250 ADAMTSL3P82987 1691 aa18.85■□□□□ 0.61
PPP4R1-219ENST00000581250 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
PPP4R1-219ENST00000581250 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
PPP4R1-219ENST00000581250 MYT1LQ9UL68 1186 aa18.84■□□□□ 0.61
PPP4R1-219ENST00000581250 MADDQ8WXG6 1647 aa18.84■□□□□ 0.61
PPP4R1-219ENST00000581250 ABCA6Q8N139 1617 aa18.83■□□□□ 0.61
PPP4R1-219ENST00000581250 LRRC9Q6ZRR7 1453 aa18.83■□□□□ 0.6
PPP4R1-219ENST00000581250 DIP2CQ9Y2E4 1556 aa18.82■□□□□ 0.6
PPP4R1-219ENST00000581250 C9orf84Q5VXU9 1444 aa18.81■□□□□ 0.6
PPP4R1-219ENST00000581250 ATP10AO60312 1499 aa18.8■□□□□ 0.6
PPP4R1-219ENST00000581250 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
PPP4R1-219ENST00000581250 KIDINS220Q9ULH0 1771 aa18.79■□□□□ 0.6
PPP4R1-219ENST00000581250 MAP3K1Q13233 1512 aa18.79■□□□□ 0.6
PPP4R1-219ENST00000581250 PLEKHH2Q8IVE3 1493 aa18.78■□□□□ 0.6
PPP4R1-219ENST00000581250 HNRNPMP52272 730 aaKnown RBP eCLIP18.78■□□□□ 0.64e-6■■■■□ 23.6
PPP4R1-219ENST00000581250 MLH3Q9UHC1 1453 aa18.77■□□□□ 0.6
PPP4R1-219ENST00000581250 ZNF644Q9H582 1327 aaPredicted RBP18.77■□□□□ 0.6
PPP4R1-219ENST00000581250 KANK4Q5T7N3 995 aaPredicted RBP18.77■□□□□ 0.6
PPP4R1-219ENST00000581250 MLECQ14165 292 aa18.76■□□□□ 0.59
PPP4R1-219ENST00000581250 PTPRMP28827 1452 aa18.75■□□□□ 0.59
PPP4R1-219ENST00000581250 FER1L4A9Z1Z3 1794 aa18.75■□□□□ 0.59
PPP4R1-219ENST00000581250 KIAA1107Q9UPP5 1409 aa18.74■□□□□ 0.59
PPP4R1-219ENST00000581250 INO80Q9ULG1 1556 aaPredicted RBP18.74■□□□□ 0.59
PPP4R1-219ENST00000581250 CAMSAP2Q08AD1 1489 aa18.74■□□□□ 0.59
PPP4R1-219ENST00000581250 ATP7AQ04656 1500 aa18.74■□□□□ 0.59
PPP4R1-219ENST00000581250 APLP2Q06481 763 aa18.72■□□□□ 0.59
PPP4R1-219ENST00000581250 REREQ9P2R6 1566 aa18.72■□□□□ 0.59
PPP4R1-219ENST00000581250 SPAG9O60271 1321 aaKnown RBP18.72■□□□□ 0.59
PPP4R1-219ENST00000581250 MBD5Q9P267 1494 aa18.69■□□□□ 0.58
PPP4R1-219ENST00000581250 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
PPP4R1-219ENST00000581250 MYOM3Q5VTT5 1437 aa18.66■□□□□ 0.58
PPP4R1-219ENST00000581250 CCDC141Q6ZP82 1450 aa18.66■□□□□ 0.58
PPP4R1-219ENST00000581250 AGLP35573 1532 aa18.64■□□□□ 0.58
PPP4R1-219ENST00000581250 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
PPP4R1-219ENST00000581250 PLXNC1O60486 1568 aa18.63■□□□□ 0.57
PPP4R1-219ENST00000581250 ARHGEF5Q12774 1597 aa18.63■□□□□ 0.57
PPP4R1-219ENST00000581250 A2MP01023 1474 aa18.61■□□□□ 0.57
PPP4R1-219ENST00000581250 MIA2Q96PC5 1412 aa18.59■□□□□ 0.57
PPP4R1-219ENST00000581250 PTPN23Q9H3S7 1636 aa18.59■□□□□ 0.57
PPP4R1-219ENST00000581250 RTEL1-TNFRSF6BF6WH68 1400 aa18.57■□□□□ 0.56
PPP4R1-219ENST00000581250 C3P01024 1663 aa18.55■□□□□ 0.56
PPP4R1-219ENST00000581250 FGD6Q6ZV73 1430 aa18.55■□□□□ 0.56
PPP4R1-219ENST00000581250 CROCC2H7BZ55 1655 aa18.54■□□□□ 0.56
PPP4R1-219ENST00000581250 CEBPAP49715 358 aaPredicted RBP18.54■□□□□ 0.56
PPP4R1-219ENST00000581250 LMTK3Q96Q04 1460 aa18.53■□□□□ 0.56
PPP4R1-219ENST00000581250 ESF1Q9H501 851 aaKnown RBP18.53■□□□□ 0.56
PPP4R1-219ENST00000581250 MAST1Q9Y2H9 1570 aa18.53■□□□□ 0.56
PPP4R1-219ENST00000581250 RSPH4AQ5TD94 716 aa18.52■□□□□ 0.56
PPP4R1-219ENST00000581250 CLTCQ00610 1675 aaKnown RBP18.52■□□□□ 0.56
PPP4R1-219ENST00000581250 TSPY4P0CV99 314 aa18.51■□□□□ 0.55
PPP4R1-219ENST00000581250 TSPY10P0CW01 314 aa18.51■□□□□ 0.55
PPP4R1-219ENST00000581250 DHX29Q7Z478 1369 aaKnown RBP18.5■□□□□ 0.55
PPP4R1-219ENST00000581250 PREX1Q8TCU6 1659 aa18.5■□□□□ 0.55
PPP4R1-219ENST00000581250 DNMT1P26358 1616 aaKnown RBP18.49■□□□□ 0.55
PPP4R1-219ENST00000581250 GGT6Q6P531 493 aa18.49■□□□□ 0.55
PPP4R1-219ENST00000581250 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
PPP4R1-219ENST00000581250 MROH2AA6NES4 1674 aa18.49■□□□□ 0.55
PPP4R1-219ENST00000581250 CNTLNQ9NXG0 1405 aa18.49■□□□□ 0.55
PPP4R1-219ENST00000581250 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
PPP4R1-219ENST00000581250 ABCC5O15440 1437 aa18.47■□□□□ 0.55
PPP4R1-219ENST00000581250 DAPK1P53355 1430 aa18.46■□□□□ 0.55
PPP4R1-219ENST00000581250 SHANK2Q9UPX8 1470 aa18.46■□□□□ 0.54
PPP4R1-219ENST00000581250 KIF3BO15066 747 aa18.45■□□□□ 0.54
PPP4R1-219ENST00000581250 HSPA2P54652 639 aa18.45■□□□□ 0.54
PPP4R1-219ENST00000581250 FAM50AQ14320 339 aaKnown RBP18.43■□□□□ 0.54
PPP4R1-219ENST00000581250 RNF17Q9BXT8 1623 aaKnown RBP18.41■□□□□ 0.54
PPP4R1-219ENST00000581250 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
PPP4R1-219ENST00000581250 ZMYM3Q14202 1370 aa18.41■□□□□ 0.54
PPP4R1-219ENST00000581250 KIF15Q9NS87 1388 aa18.41■□□□□ 0.54
PPP4R1-219ENST00000581250 SETD1BQ9UPS6 1966 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms