RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 POGZQ7Z3K3 1410 aa19.52■□□□□ 0.72
PSMD3-205ENST00000580980 ARHGAP5Q13017 1502 aa19.51■□□□□ 0.71
PSMD3-205ENST00000580980 ARHGEF40Q8TER5 1519 aa19.5■□□□□ 0.71
PSMD3-205ENST00000580980 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
PSMD3-205ENST00000580980 ZFYVE16Q7Z3T8 1539 aa19.46■□□□□ 0.71
PSMD3-205ENST00000580980 PREX2Q70Z35 1606 aa19.46■□□□□ 0.71
PSMD3-205ENST00000580980 ZNF518AQ6AHZ1 1483 aa19.46■□□□□ 0.71
PSMD3-205ENST00000580980 ARID4BQ4LE39 1312 aaPredicted RBP19.46■□□□□ 0.71
PSMD3-205ENST00000580980 CDC42BPBQ9Y5S2 1711 aa19.45■□□□□ 0.7
PSMD3-205ENST00000580980 MTUS2Q5JR59 1369 aa19.44■□□□□ 0.7
PSMD3-205ENST00000580980 YEATS2Q9ULM3 1422 aa19.43■□□□□ 0.7
PSMD3-205ENST00000580980 ADAMTSL3P82987 1691 aa19.42■□□□□ 0.7
PSMD3-205ENST00000580980 AFAP1Q8N556 730 aa19.41■□□□□ 0.7
PSMD3-205ENST00000580980 GPATCH8Q9UKJ3 1502 aaKnown RBP19.41■□□□□ 0.7
PSMD3-205ENST00000580980 KDM5CP41229 1560 aa19.4■□□□□ 0.7
PSMD3-205ENST00000580980 BCORL1Q5H9F3 1711 aa19.4■□□□□ 0.7
PSMD3-205ENST00000580980 ATP10AO60312 1499 aa19.4■□□□□ 0.7
PSMD3-205ENST00000580980 ABCC1P33527 1531 aa19.4■□□□□ 0.7
PSMD3-205ENST00000580980 CDC42BPAQ5VT25 1732 aa19.39■□□□□ 0.7
PSMD3-205ENST00000580980 EHBP1L1Q8N3D4 1523 aa19.38■□□□□ 0.69
PSMD3-205ENST00000580980 CCNB3Q8WWL7 1395 aa19.38■□□□□ 0.69
PSMD3-205ENST00000580980 C9orf84Q5VXU9 1444 aa19.37■□□□□ 0.69
PSMD3-205ENST00000580980 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
PSMD3-205ENST00000580980 ARHGEF12Q9NZN5 1544 aa19.36■□□□□ 0.69
PSMD3-205ENST00000580980 MLH3Q9UHC1 1453 aa19.36■□□□□ 0.69
PSMD3-205ENST00000580980 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
PSMD3-205ENST00000580980 PTPRMP28827 1452 aa19.35■□□□□ 0.69
PSMD3-205ENST00000580980 TRAPPC8Q9Y2L5 1435 aa19.35■□□□□ 0.69
PSMD3-205ENST00000580980 ZNF777Q9ULD5 760 aaPredicted RBP19.35■□□□□ 0.69
PSMD3-205ENST00000580980 MYT1LQ9UL68 1186 aa19.34■□□□□ 0.69
PSMD3-205ENST00000580980 HECW2Q9P2P5 1572 aa19.34■□□□□ 0.69
PSMD3-205ENST00000580980 PLEKHH2Q8IVE3 1493 aa19.34■□□□□ 0.69
PSMD3-205ENST00000580980 KIAA1107Q9UPP5 1409 aa19.34■□□□□ 0.69
PSMD3-205ENST00000580980 ITSN2Q9NZM3 1697 aa19.33■□□□□ 0.69
PSMD3-205ENST00000580980 SAMD9LQ8IVG5 1584 aa19.32■□□□□ 0.68
PSMD3-205ENST00000580980 MADDQ8WXG6 1647 aa19.32■□□□□ 0.68
PSMD3-205ENST00000580980 TIAM1Q13009 1591 aa19.3■□□□□ 0.68
PSMD3-205ENST00000580980 SIGLEC1Q9BZZ2 1709 aa19.29■□□□□ 0.68
PSMD3-205ENST00000580980 REREQ9P2R6 1566 aa19.29■□□□□ 0.68
PSMD3-205ENST00000580980 DIP2CQ9Y2E4 1556 aa19.28■□□□□ 0.68
PSMD3-205ENST00000580980 HNRNPMP52272 730 aaKnown RBP eCLIP19.28■□□□□ 0.68
PSMD3-205ENST00000580980 SYCP2Q9BX26 1530 aa19.28■□□□□ 0.68
PSMD3-205ENST00000580980 MAP3K1Q13233 1512 aa19.27■□□□□ 0.68
PSMD3-205ENST00000580980 NCOA2Q15596 1464 aa19.27■□□□□ 0.67
PSMD3-205ENST00000580980 MLECQ14165 292 aa19.26■□□□□ 0.67
PSMD3-205ENST00000580980 SPAG9O60271 1321 aaKnown RBP19.25■□□□□ 0.67
PSMD3-205ENST00000580980 ABCA6Q8N139 1617 aa19.25■□□□□ 0.67
PSMD3-205ENST00000580980 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
PSMD3-205ENST00000580980 RIMS1Q86UR5 1692 aaKnown RBP19.24■□□□□ 0.67
PSMD3-205ENST00000580980 LRRC9Q6ZRR7 1453 aa19.24■□□□□ 0.67
PSMD3-205ENST00000580980 AGLP35573 1532 aa19.24■□□□□ 0.67
PSMD3-205ENST00000580980 KIDINS220Q9ULH0 1771 aa19.24■□□□□ 0.67
PSMD3-205ENST00000580980 ZNF644Q9H582 1327 aaPredicted RBP19.21■□□□□ 0.67
PSMD3-205ENST00000580980 MBD5Q9P267 1494 aa19.2■□□□□ 0.66
PSMD3-205ENST00000580980 RSPH4AQ5TD94 716 aa19.19■□□□□ 0.66
PSMD3-205ENST00000580980 ATP7AQ04656 1500 aa19.19■□□□□ 0.66
PSMD3-205ENST00000580980 FER1L4A9Z1Z3 1794 aa19.19■□□□□ 0.66
PSMD3-205ENST00000580980 APLP2Q06481 763 aa19.17■□□□□ 0.66
PSMD3-205ENST00000580980 KANK4Q5T7N3 995 aaPredicted RBP19.17■□□□□ 0.66
PSMD3-205ENST00000580980 INO80Q9ULG1 1556 aaPredicted RBP19.17■□□□□ 0.66
PSMD3-205ENST00000580980 RTEL1-TNFRSF6BF6WH68 1400 aa19.17■□□□□ 0.66
PSMD3-205ENST00000580980 CAMSAP2Q08AD1 1489 aa19.14■□□□□ 0.65
PSMD3-205ENST00000580980 ESF1Q9H501 851 aaKnown RBP19.13■□□□□ 0.65
PSMD3-205ENST00000580980 A2MP01023 1474 aa19.13■□□□□ 0.65
PSMD3-205ENST00000580980 CCDC141Q6ZP82 1450 aa19.13■□□□□ 0.65
PSMD3-205ENST00000580980 LMTK3Q96Q04 1460 aa19.12■□□□□ 0.65
PSMD3-205ENST00000580980 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
PSMD3-205ENST00000580980 MIA2Q96PC5 1412 aa19.11■□□□□ 0.65
PSMD3-205ENST00000580980 CNTLNQ9NXG0 1405 aa19.11■□□□□ 0.65
PSMD3-205ENST00000580980 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
PSMD3-205ENST00000580980 MYOM3Q5VTT5 1437 aa19.09■□□□□ 0.65
PSMD3-205ENST00000580980 ARHGEF5Q12774 1597 aa19.09■□□□□ 0.65
PSMD3-205ENST00000580980 ADGBQ8N7X0 1667 aa19.08■□□□□ 0.65
PSMD3-205ENST00000580980 TSPY4P0CV99 314 aa19.08■□□□□ 0.64
PSMD3-205ENST00000580980 TSPY10P0CW01 314 aa19.08■□□□□ 0.64
PSMD3-205ENST00000580980 CEBPAP49715 358 aaPredicted RBP19.08■□□□□ 0.64
PSMD3-205ENST00000580980 PPP6R1Q9UPN7 881 aa19.07■□□□□ 0.64
PSMD3-205ENST00000580980 DHX29Q7Z478 1369 aaKnown RBP19.06■□□□□ 0.64
PSMD3-205ENST00000580980 GGT6Q6P531 493 aa19.02■□□□□ 0.64
PSMD3-205ENST00000580980 C3P01024 1663 aa19.01■□□□□ 0.63
PSMD3-205ENST00000580980 PREX1Q8TCU6 1659 aa19.01■□□□□ 0.63
PSMD3-205ENST00000580980 HSPA2P54652 639 aa19■□□□□ 0.63
PSMD3-205ENST00000580980 ZMYM3Q14202 1370 aa19■□□□□ 0.63
PSMD3-205ENST00000580980 MROH2AA6NES4 1674 aa19■□□□□ 0.63
PSMD3-205ENST00000580980 UHRF1BP1Q6BDS2 1440 aa19■□□□□ 0.63
PSMD3-205ENST00000580980 MAST1Q9Y2H9 1570 aa18.99■□□□□ 0.63
PSMD3-205ENST00000580980 NPATQ14207 1427 aa18.99■□□□□ 0.63
PSMD3-205ENST00000580980 SETD1BQ9UPS6 1966 aaKnown RBP18.99■□□□□ 0.63
PSMD3-205ENST00000580980 KIF3BO15066 747 aa18.97■□□□□ 0.63
PSMD3-205ENST00000580980 FGD6Q6ZV73 1430 aa18.95■□□□□ 0.62
PSMD3-205ENST00000580980 FAM135AQ9P2D6 1515 aa18.95■□□□□ 0.62
PSMD3-205ENST00000580980 PTPN23Q9H3S7 1636 aa18.93■□□□□ 0.62
PSMD3-205ENST00000580980 CLTCQ00610 1675 aaKnown RBP18.93■□□□□ 0.62
PSMD3-205ENST00000580980 TCOF1Q13428 1488 aaKnown RBP18.93■□□□□ 0.62
PSMD3-205ENST00000580980 ABCC5O15440 1437 aa18.91■□□□□ 0.62
PSMD3-205ENST00000580980 SHANK2Q9UPX8 1470 aa18.91■□□□□ 0.62
PSMD3-205ENST00000580980 PTPRKQ15262 1439 aa18.9■□□□□ 0.62
PSMD3-205ENST00000580980 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
PSMD3-205ENST00000580980 WASHC2CQ9Y4E1 1318 aa18.88■□□□□ 0.61
PSMD3-205ENST00000580980 DAPK1P53355 1430 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms