RNA–Protein interactions for RNA: ENST00000580597.2

RN7SL339P-201, Transcript of RNA, 7SL, cytoplasmic 339, pseudogene, humanhuman

BASIC

Gene RN7SL339P, Length 296 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL339P-201ENST00000580597 C2orf72A6NCS6 295 aa13.64□□□□□ -0.23
RN7SL339P-201ENST00000580597 PLCB2Q00722 1185 aa13.64□□□□□ -0.23
RN7SL339P-201ENST00000580597 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
RN7SL339P-201ENST00000580597 CRISPLD2Q9H0B8 497 aa13.63□□□□□ -0.23
RN7SL339P-201ENST00000580597 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
RN7SL339P-201ENST00000580597 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
RN7SL339P-201ENST00000580597 NCKAP5LQ9HCH0 1330 aa13.6□□□□□ -0.23
RN7SL339P-201ENST00000580597 SNPHO15079 494 aa13.58□□□□□ -0.24
RN7SL339P-201ENST00000580597 PDE4AP27815 886 aa13.56□□□□□ -0.24
RN7SL339P-201ENST00000580597 FOXK1P85037 733 aa13.56□□□□□ -0.24
RN7SL339P-201ENST00000580597 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
RN7SL339P-201ENST00000580597 MFSD10Q14728 455 aa13.53□□□□□ -0.24
RN7SL339P-201ENST00000580597 DSG2Q14126 1118 aa13.52□□□□□ -0.25
RN7SL339P-201ENST00000580597 DOK7Q18PE1 504 aa13.5□□□□□ -0.25
RN7SL339P-201ENST00000580597 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
RN7SL339P-201ENST00000580597 LARP6Q9BRS8 491 aaKnown RBP13.49□□□□□ -0.25
RN7SL339P-201ENST00000580597 PPP1R15BQ5SWA1 713 aa13.48□□□□□ -0.25
RN7SL339P-201ENST00000580597 LCE2DQ5TA82 110 aaPredicted RBP13.48□□□□□ -0.25
RN7SL339P-201ENST00000580597 PLPP6Q8IY26 295 aa13.48□□□□□ -0.25
RN7SL339P-201ENST00000580597 DDX27Q96GQ7 796 aaKnown RBP13.47□□□□□ -0.25
RN7SL339P-201ENST00000580597 SLC34A2O95436 690 aa13.45□□□□□ -0.26
RN7SL339P-201ENST00000580597 FAM163AQ96GL9 167 aaPredicted RBP13.45□□□□□ -0.26
RN7SL339P-201ENST00000580597 ST18O60284 1047 aa13.44□□□□□ -0.26
RN7SL339P-201ENST00000580597 RIMBP2O15034 1052 aa13.43□□□□□ -0.26
RN7SL339P-201ENST00000580597 ZSWIM6Q9HCJ5 1215 aa13.43□□□□□ -0.26
RN7SL339P-201ENST00000580597 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
RN7SL339P-201ENST00000580597 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
RN7SL339P-201ENST00000580597 HOXB1P14653 301 aaPredicted RBP13.37□□□□□ -0.27
RN7SL339P-201ENST00000580597 GPR153Q6NV75 609 aa13.37□□□□□ -0.27
RN7SL339P-201ENST00000580597 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
RN7SL339P-201ENST00000580597 CAMK2BQ13554 666 aa13.35□□□□□ -0.27
RN7SL339P-201ENST00000580597 PCDHGA4Q9Y5G9 962 aa13.34□□□□□ -0.27
RN7SL339P-201ENST00000580597 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
RN7SL339P-201ENST00000580597 ARSIQ5FYB1 569 aa13.31□□□□□ -0.28
RN7SL339P-201ENST00000580597 WDR70Q9NW82 654 aa13.31□□□□□ -0.28
RN7SL339P-201ENST00000580597 EMILIN3Q9NT22 766 aa13.3□□□□□ -0.28
RN7SL339P-201ENST00000580597 UPF1Q92900 1129 aaKnown RBP eCLIP13.27□□□□□ -0.29
RN7SL339P-201ENST00000580597 KHSRPQ92945 711 aaKnown RBP eCLIP13.27□□□□□ -0.29
RN7SL339P-201ENST00000580597 MARVELD3Q96A59 401 aa13.27□□□□□ -0.29
RN7SL339P-201ENST00000580597 KDM4FA0A1W2PPD8 638 aa13.26□□□□□ -0.29
RN7SL339P-201ENST00000580597 TBC1D12O60347 775 aa13.26□□□□□ -0.29
RN7SL339P-201ENST00000580597 EMP3P54852 163 aa13.26□□□□□ -0.29
RN7SL339P-201ENST00000580597 E2F4Q16254 413 aa13.26□□□□□ -0.29
RN7SL339P-201ENST00000580597 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
RN7SL339P-201ENST00000580597 POTEMA6NI47 508 aa13.24□□□□□ -0.29
RN7SL339P-201ENST00000580597 NUDT7P0C024 238 aa13.23□□□□□ -0.29
RN7SL339P-201ENST00000580597 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
RN7SL339P-201ENST00000580597 ARIH1Q9Y4X5 557 aaPredicted RBP13.21□□□□□ -0.29
RN7SL339P-201ENST00000580597 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
RN7SL339P-201ENST00000580597 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
RN7SL339P-201ENST00000580597 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
RN7SL339P-201ENST00000580597 DPYSL4O14531 572 aa13.17□□□□□ -0.3
RN7SL339P-201ENST00000580597 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
RN7SL339P-201ENST00000580597 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
RN7SL339P-201ENST00000580597 ERBB3P21860 1342 aa13.15□□□□□ -0.3
RN7SL339P-201ENST00000580597 EVI5O60447 810 aa13.15□□□□□ -0.3
RN7SL339P-201ENST00000580597 HS3ST6Q96QI5 342 aa13.15□□□□□ -0.3
RN7SL339P-201ENST00000580597 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
RN7SL339P-201ENST00000580597 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
RN7SL339P-201ENST00000580597 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
RN7SL339P-201ENST00000580597 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
RN7SL339P-201ENST00000580597 P3H3Q8IVL6 736 aa13.14□□□□□ -0.31
RN7SL339P-201ENST00000580597 PDIA6Q15084 440 aa13.12□□□□□ -0.31
RN7SL339P-201ENST00000580597 VARS2Q5ST30 1063 aaKnown RBP13.12□□□□□ -0.31
RN7SL339P-201ENST00000580597 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
RN7SL339P-201ENST00000580597 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
RN7SL339P-201ENST00000580597 SPDYE16A6NNV3 312 aaPredicted RBP13.09□□□□□ -0.31
RN7SL339P-201ENST00000580597 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
RN7SL339P-201ENST00000580597 PTGER2P43116 358 aa13.04□□□□□ -0.32
RN7SL339P-201ENST00000580597 FOSBP53539 338 aa13.04□□□□□ -0.32
RN7SL339P-201ENST00000580597 ZNF687Q8N1G0 1237 aa13.04□□□□□ -0.32
RN7SL339P-201ENST00000580597 PCDH10Q9P2E7 1040 aa13.04□□□□□ -0.32
RN7SL339P-201ENST00000580597 CDAN1Q8IWY9 1227 aa13.03□□□□□ -0.32
RN7SL339P-201ENST00000580597 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
RN7SL339P-201ENST00000580597 ZNF454Q8N9F8 522 aa13□□□□□ -0.33
RN7SL339P-201ENST00000580597 PHF14O94880 888 aa12.98□□□□□ -0.33
RN7SL339P-201ENST00000580597 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
RN7SL339P-201ENST00000580597 PCDHGA10Q9Y5H3 936 aa12.97□□□□□ -0.33
RN7SL339P-201ENST00000580597 PBX2P40425 430 aa12.96□□□□□ -0.33
RN7SL339P-201ENST00000580597 KRTAP3-3Q9BYR6 98 aa12.96□□□□□ -0.33
RN7SL339P-201ENST00000580597 KRTAP3-2Q9BYR7 98 aa12.96□□□□□ -0.33
RN7SL339P-201ENST00000580597 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
RN7SL339P-201ENST00000580597 POTEEQ6S8J3 1075 aa12.94□□□□□ -0.34
RN7SL339P-201ENST00000580597 DDX12PQ92771 950 aa12.94□□□□□ -0.34
RN7SL339P-201ENST00000580597 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
RN7SL339P-201ENST00000580597 EPAS1Q99814 870 aa12.94□□□□□ -0.34
RN7SL339P-201ENST00000580597 FBXW7Q969H0 707 aa12.93□□□□□ -0.34
RN7SL339P-201ENST00000580597 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
RN7SL339P-201ENST00000580597 ADAM33Q9BZ11 813 aa12.91□□□□□ -0.34
RN7SL339P-201ENST00000580597 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
RN7SL339P-201ENST00000580597 NBR1Q14596 966 aa12.89□□□□□ -0.35
RN7SL339P-201ENST00000580597 GRXCR2A6NFK2 248 aa12.87□□□□□ -0.35
RN7SL339P-201ENST00000580597 SEMA3EO15041 775 aa12.87□□□□□ -0.35
RN7SL339P-201ENST00000580597 MLLT3P42568 568 aaPredicted RBP12.86□□□□□ -0.35
RN7SL339P-201ENST00000580597 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
RN7SL339P-201ENST00000580597 AXIN2Q9Y2T1 843 aa12.86□□□□□ -0.35
RN7SL339P-201ENST00000580597 OSBPP22059 807 aa12.85□□□□□ -0.35
RN7SL339P-201ENST00000580597 PTPREP23469 700 aa12.85□□□□□ -0.35
RN7SL339P-201ENST00000580597 KCNK17Q96T54 332 aa12.85□□□□□ -0.35
RN7SL339P-201ENST00000580597 TESPA1A2RU30 521 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms