RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 EHBP1L1Q8N3D4 1523 aa17.37■□□□□ 0.37
NDEL1-208ENST00000580237 ARHGEF40Q8TER5 1519 aa17.37■□□□□ 0.37
NDEL1-208ENST00000580237 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
NDEL1-208ENST00000580237 EFCAB2Q5VUJ9 269 aa17.35■□□□□ 0.37
NDEL1-208ENST00000580237 VPS8Q8N3P4 1428 aa17.35■□□□□ 0.37
NDEL1-208ENST00000580237 ZMYM4Q5VZL5 1548 aa17.35■□□□□ 0.37
NDEL1-208ENST00000580237 ITSN2Q9NZM3 1697 aa17.34■□□□□ 0.37
NDEL1-208ENST00000580237 POGZQ7Z3K3 1410 aa17.33■□□□□ 0.36
NDEL1-208ENST00000580237 SCAPERQ9BY12 1400 aa17.33■□□□□ 0.36
NDEL1-208ENST00000580237 ZFYVE16Q7Z3T8 1539 aa17.32■□□□□ 0.36
NDEL1-208ENST00000580237 TIAM1Q13009 1591 aa17.32■□□□□ 0.36
NDEL1-208ENST00000580237 SUPT6HQ7KZ85 1726 aaKnown RBP17.31■□□□□ 0.36
NDEL1-208ENST00000580237 ABCC1P33527 1531 aa17.31■□□□□ 0.36
NDEL1-208ENST00000580237 KDM4FA0A1W2PPD8 638 aa17.29■□□□□ 0.36
NDEL1-208ENST00000580237 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
NDEL1-208ENST00000580237 HECW2Q9P2P5 1572 aa17.28■□□□□ 0.36
NDEL1-208ENST00000580237 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
NDEL1-208ENST00000580237 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
NDEL1-208ENST00000580237 KDM5CP41229 1560 aa17.26■□□□□ 0.35
NDEL1-208ENST00000580237 SAMD9LQ8IVG5 1584 aa17.26■□□□□ 0.35
NDEL1-208ENST00000580237 GPATCH8Q9UKJ3 1502 aaKnown RBP17.25■□□□□ 0.35
NDEL1-208ENST00000580237 BCORL1Q5H9F3 1711 aa17.24■□□□□ 0.35
NDEL1-208ENST00000580237 ARID4BQ4LE39 1312 aaPredicted RBP17.24■□□□□ 0.35
NDEL1-208ENST00000580237 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
NDEL1-208ENST00000580237 SYCP2Q9BX26 1530 aa17.24■□□□□ 0.35
NDEL1-208ENST00000580237 YEATS2Q9ULM3 1422 aa17.23■□□□□ 0.35
NDEL1-208ENST00000580237 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
NDEL1-208ENST00000580237 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
NDEL1-208ENST00000580237 PLEKHH2Q8IVE3 1493 aa17.21■□□□□ 0.35
NDEL1-208ENST00000580237 ADAMTSL3P82987 1691 aa17.2■□□□□ 0.34
NDEL1-208ENST00000580237 CFDP1Q9UEE9 299 aaPredicted RBP17.2■□□□□ 0.34
NDEL1-208ENST00000580237 MAP3K1Q13233 1512 aa17.2■□□□□ 0.34
NDEL1-208ENST00000580237 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
NDEL1-208ENST00000580237 SIGLEC1Q9BZZ2 1709 aa17.19■□□□□ 0.34
NDEL1-208ENST00000580237 ABCA6Q8N139 1617 aa17.19■□□□□ 0.34
NDEL1-208ENST00000580237 MADDQ8WXG6 1647 aa17.19■□□□□ 0.34
NDEL1-208ENST00000580237 ARHGEF12Q9NZN5 1544 aa17.19■□□□□ 0.34
NDEL1-208ENST00000580237 C9orf84Q5VXU9 1444 aa17.19■□□□□ 0.34
NDEL1-208ENST00000580237 APLP2Q06481 763 aa17.18■□□□□ 0.34
NDEL1-208ENST00000580237 TRAPPC8Q9Y2L5 1435 aa17.18■□□□□ 0.34
NDEL1-208ENST00000580237 DIP2CQ9Y2E4 1556 aa17.18■□□□□ 0.34
NDEL1-208ENST00000580237 FER1L4A9Z1Z3 1794 aa17.17■□□□□ 0.34
NDEL1-208ENST00000580237 RIMS1Q86UR5 1692 aaKnown RBP17.17■□□□□ 0.34
NDEL1-208ENST00000580237 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
NDEL1-208ENST00000580237 KIDINS220Q9ULH0 1771 aa17.16■□□□□ 0.34
NDEL1-208ENST00000580237 ATP10AO60312 1499 aa17.16■□□□□ 0.34
NDEL1-208ENST00000580237 MLH3Q9UHC1 1453 aa17.15■□□□□ 0.34
NDEL1-208ENST00000580237 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
NDEL1-208ENST00000580237 INO80Q9ULG1 1556 aaPredicted RBP17.13■□□□□ 0.33
NDEL1-208ENST00000580237 CAMSAP2Q08AD1 1489 aa17.12■□□□□ 0.33
NDEL1-208ENST00000580237 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
NDEL1-208ENST00000580237 REREQ9P2R6 1566 aa17.12■□□□□ 0.33
NDEL1-208ENST00000580237 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.33
NDEL1-208ENST00000580237 PTPRMP28827 1452 aa17.1■□□□□ 0.33
NDEL1-208ENST00000580237 MLECQ14165 292 aa17.09■□□□□ 0.33
NDEL1-208ENST00000580237 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
NDEL1-208ENST00000580237 ADGBQ8N7X0 1667 aa17.08■□□□□ 0.32
NDEL1-208ENST00000580237 ZNF644Q9H582 1327 aaPredicted RBP17.07■□□□□ 0.32
NDEL1-208ENST00000580237 KANK4Q5T7N3 995 aaPredicted RBP17.07■□□□□ 0.32
NDEL1-208ENST00000580237 CCDC141Q6ZP82 1450 aa17.06■□□□□ 0.32
NDEL1-208ENST00000580237 MYOM3Q5VTT5 1437 aa17.05■□□□□ 0.32
NDEL1-208ENST00000580237 ARHGEF5Q12774 1597 aa17.04■□□□□ 0.32
NDEL1-208ENST00000580237 AGLP35573 1532 aa17.04■□□□□ 0.32
NDEL1-208ENST00000580237 MBD5Q9P267 1494 aa17.03■□□□□ 0.32
NDEL1-208ENST00000580237 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
NDEL1-208ENST00000580237 MIA2Q96PC5 1412 aa17.01■□□□□ 0.31
NDEL1-208ENST00000580237 PLXNC1O60486 1568 aa17.01■□□□□ 0.31
NDEL1-208ENST00000580237 A2MP01023 1474 aa17■□□□□ 0.31
NDEL1-208ENST00000580237 PTPN23Q9H3S7 1636 aa17■□□□□ 0.31
NDEL1-208ENST00000580237 CROCC2H7BZ55 1655 aa16.99■□□□□ 0.31
NDEL1-208ENST00000580237 ESF1Q9H501 851 aaKnown RBP16.98■□□□□ 0.31
NDEL1-208ENST00000580237 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
NDEL1-208ENST00000580237 RSPH4AQ5TD94 716 aa16.96■□□□□ 0.31
NDEL1-208ENST00000580237 C3P01024 1663 aa16.95■□□□□ 0.3
NDEL1-208ENST00000580237 MAST1Q9Y2H9 1570 aa16.95■□□□□ 0.3
NDEL1-208ENST00000580237 MROH2AA6NES4 1674 aa16.94■□□□□ 0.3
NDEL1-208ENST00000580237 FGD6Q6ZV73 1430 aa16.94■□□□□ 0.3
NDEL1-208ENST00000580237 CLTCQ00610 1675 aaKnown RBP16.94■□□□□ 0.3
NDEL1-208ENST00000580237 PREX1Q8TCU6 1659 aa16.94■□□□□ 0.3
NDEL1-208ENST00000580237 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
NDEL1-208ENST00000580237 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
NDEL1-208ENST00000580237 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
NDEL1-208ENST00000580237 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
NDEL1-208ENST00000580237 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
NDEL1-208ENST00000580237 LMTK3Q96Q04 1460 aa16.89■□□□□ 0.29
NDEL1-208ENST00000580237 SHANK2Q9UPX8 1470 aa16.89■□□□□ 0.29
NDEL1-208ENST00000580237 SETD1BQ9UPS6 1966 aaKnown RBP16.88■□□□□ 0.29
NDEL1-208ENST00000580237 GGT6Q6P531 493 aa16.87■□□□□ 0.29
NDEL1-208ENST00000580237 EIF2AK4Q9P2K8 1649 aaKnown RBP16.87■□□□□ 0.29
NDEL1-208ENST00000580237 DHX29Q7Z478 1369 aaKnown RBP16.87■□□□□ 0.29
NDEL1-208ENST00000580237 CEBPAP49715 358 aaPredicted RBP16.86■□□□□ 0.29
NDEL1-208ENST00000580237 DAPK1P53355 1430 aa16.86■□□□□ 0.29
NDEL1-208ENST00000580237 KDM5DQ9BY66 1539 aa16.84■□□□□ 0.29
NDEL1-208ENST00000580237 RNF17Q9BXT8 1623 aaKnown RBP16.84■□□□□ 0.29
NDEL1-208ENST00000580237 KIF3BO15066 747 aa16.83■□□□□ 0.28
NDEL1-208ENST00000580237 ABCC5O15440 1437 aa16.83■□□□□ 0.28
NDEL1-208ENST00000580237 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.28
NDEL1-208ENST00000580237 UHRF1BP1Q6BDS2 1440 aa16.83■□□□□ 0.28
NDEL1-208ENST00000580237 DUOX2Q9NRD8 1548 aa16.83■□□□□ 0.28
NDEL1-208ENST00000580237 FAM135AQ9P2D6 1515 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms