RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 DENND4BO75064 1496 aaPredicted RBP29.59■■■□□ 2.33
NEK4P2-201ENST00000580004 RICTORQ6R327 1708 aa29.59■■■□□ 2.33
NEK4P2-201ENST00000580004 ADGRL1O94910 1474 aa29.57■■■□□ 2.32
NEK4P2-201ENST00000580004 FRMPD1Q5SYB0 1578 aa29.56■■■□□ 2.32
NEK4P2-201ENST00000580004 SUPT6HQ7KZ85 1726 aaKnown RBP29.51■■■□□ 2.32
NEK4P2-201ENST00000580004 ZMYM4Q5VZL5 1548 aa29.5■■■□□ 2.31
NEK4P2-201ENST00000580004 GPATCH8Q9UKJ3 1502 aaKnown RBP29.5■■■□□ 2.31
NEK4P2-201ENST00000580004 RAPGEF3O95398 923 aa29.5■■■□□ 2.31
NEK4P2-201ENST00000580004 SCAPERQ9BY12 1400 aa29.5■■■□□ 2.31
NEK4P2-201ENST00000580004 ITSN2Q9NZM3 1697 aa29.49■■■□□ 2.31
NEK4P2-201ENST00000580004 POGZQ7Z3K3 1410 aa29.48■■■□□ 2.31
NEK4P2-201ENST00000580004 CCNB3Q8WWL7 1395 aa29.48■■■□□ 2.31
NEK4P2-201ENST00000580004 LRRC9Q6ZRR7 1453 aa29.48■■■□□ 2.31
NEK4P2-201ENST00000580004 MAGI2Q86UL8 1455 aa29.47■■■□□ 2.31
NEK4P2-201ENST00000580004 ABCC1P33527 1531 aa29.45■■■□□ 2.3
NEK4P2-201ENST00000580004 ZNF518AQ6AHZ1 1483 aa29.44■■■□□ 2.3
NEK4P2-201ENST00000580004 NCOA2Q15596 1464 aa29.41■■■□□ 2.3
NEK4P2-201ENST00000580004 ARHGEF40Q8TER5 1519 aa29.4■■■□□ 2.3
NEK4P2-201ENST00000580004 APLP2Q06481 763 aa29.4■■■□□ 2.3
NEK4P2-201ENST00000580004 PLEKHH2Q8IVE3 1493 aa29.4■■■□□ 2.3
NEK4P2-201ENST00000580004 KDM5CP41229 1560 aa29.39■■■□□ 2.3
NEK4P2-201ENST00000580004 SAMD9LQ8IVG5 1584 aa29.39■■■□□ 2.29
NEK4P2-201ENST00000580004 CFDP1Q9UEE9 299 aaPredicted RBP29.38■■■□□ 2.29
NEK4P2-201ENST00000580004 KIAA1107Q9UPP5 1409 aa29.36■■■□□ 2.29
NEK4P2-201ENST00000580004 ZFYVE16Q7Z3T8 1539 aa29.35■■■□□ 2.29
NEK4P2-201ENST00000580004 ARHGEF12Q9NZN5 1544 aa29.32■■■□□ 2.28
NEK4P2-201ENST00000580004 HECW2Q9P2P5 1572 aa29.3■■■□□ 2.28
NEK4P2-201ENST00000580004 MLH3Q9UHC1 1453 aa29.29■■■□□ 2.28
NEK4P2-201ENST00000580004 KANK4Q5T7N3 995 aaPredicted RBP29.29■■■□□ 2.28
NEK4P2-201ENST00000580004 SYCP2Q9BX26 1530 aa29.29■■■□□ 2.28
NEK4P2-201ENST00000580004 ZNF777Q9ULD5 760 aaPredicted RBP29.28■■■□□ 2.28
NEK4P2-201ENST00000580004 TRAPPC8Q9Y2L5 1435 aa29.27■■■□□ 2.28
NEK4P2-201ENST00000580004 AFAP1Q8N556 730 aa29.25■■■□□ 2.27
NEK4P2-201ENST00000580004 YEATS2Q9ULM3 1422 aa29.25■■■□□ 2.27
NEK4P2-201ENST00000580004 KDM4FA0A1W2PPD8 638 aa29.24■■■□□ 2.27
NEK4P2-201ENST00000580004 ATP10AO60312 1499 aa29.22■■■□□ 2.27
NEK4P2-201ENST00000580004 MIA2Q96PC5 1412 aa29.21■■■□□ 2.27
NEK4P2-201ENST00000580004 AEBP2Q6ZN18 517 aaPredicted RBP29.2■■■□□ 2.26
NEK4P2-201ENST00000580004 REREQ9P2R6 1566 aa29.2■■■□□ 2.26
NEK4P2-201ENST00000580004 MYOM3Q5VTT5 1437 aa29.2■■■□□ 2.26
NEK4P2-201ENST00000580004 C9orf84Q5VXU9 1444 aa29.2■■■□□ 2.26
NEK4P2-201ENST00000580004 KIDINS220Q9ULH0 1771 aa29.18■■■□□ 2.26
NEK4P2-201ENST00000580004 CAMSAP2Q08AD1 1489 aa29.18■■■□□ 2.26
NEK4P2-201ENST00000580004 MBD5Q9P267 1494 aa29.18■■■□□ 2.26
NEK4P2-201ENST00000580004 DIP2CQ9Y2E4 1556 aa29.18■■■□□ 2.26
NEK4P2-201ENST00000580004 BCORL1Q5H9F3 1711 aa29.17■■■□□ 2.26
NEK4P2-201ENST00000580004 HNRNPMP52272 730 aaKnown RBP eCLIP29.17■■■□□ 2.26
NEK4P2-201ENST00000580004 RSPH4AQ5TD94 716 aa29.16■■■□□ 2.26
NEK4P2-201ENST00000580004 ABCA6Q8N139 1617 aa29.15■■■□□ 2.26
NEK4P2-201ENST00000580004 INO80Q9ULG1 1556 aaPredicted RBP29.14■■■□□ 2.26
NEK4P2-201ENST00000580004 ADAMTSL3P82987 1691 aa29.14■■■□□ 2.26
NEK4P2-201ENST00000580004 ZNF644Q9H582 1327 aaPredicted RBP29.14■■■□□ 2.25
NEK4P2-201ENST00000580004 ARHGEF5Q12774 1597 aa29.13■■■□□ 2.25
NEK4P2-201ENST00000580004 ATP7AQ04656 1500 aa29.12■■■□□ 2.25
NEK4P2-201ENST00000580004 SPAG9O60271 1321 aaKnown RBP29.12■■■□□ 2.25
NEK4P2-201ENST00000580004 ARID4BQ4LE39 1312 aaPredicted RBP29.11■■■□□ 2.25
NEK4P2-201ENST00000580004 SIGLEC1Q9BZZ2 1709 aa29.11■■■□□ 2.25
NEK4P2-201ENST00000580004 CCDC141Q6ZP82 1450 aa29.1■■■□□ 2.25
NEK4P2-201ENST00000580004 MYT1LQ9UL68 1186 aa29.1■■■□□ 2.25
NEK4P2-201ENST00000580004 RTEL1-TNFRSF6BF6WH68 1400 aa29.09■■■□□ 2.25
NEK4P2-201ENST00000580004 AGLP35573 1532 aa29.07■■■□□ 2.24
NEK4P2-201ENST00000580004 ADGBQ8N7X0 1667 aa29.03■■■□□ 2.24
NEK4P2-201ENST00000580004 PTPN23Q9H3S7 1636 aa29.02■■■□□ 2.24
NEK4P2-201ENST00000580004 FGD6Q6ZV73 1430 aa29.02■■■□□ 2.24
NEK4P2-201ENST00000580004 MADDQ8WXG6 1647 aa29■■■□□ 2.23
NEK4P2-201ENST00000580004 TCOF1Q13428 1488 aaKnown RBP28.99■■■□□ 2.23
NEK4P2-201ENST00000580004 MAST1Q9Y2H9 1570 aa28.99■■■□□ 2.23
NEK4P2-201ENST00000580004 PLXNC1O60486 1568 aa28.98■■■□□ 2.23
NEK4P2-201ENST00000580004 TSPY4P0CV99 314 aa28.96■■■□□ 2.23
NEK4P2-201ENST00000580004 TSPY10P0CW01 314 aa28.96■■■□□ 2.23
NEK4P2-201ENST00000580004 FER1L4A9Z1Z3 1794 aa28.96■■■□□ 2.23
NEK4P2-201ENST00000580004 A2MP01023 1474 aa28.95■■■□□ 2.22
NEK4P2-201ENST00000580004 PTPRMP28827 1452 aa28.93■■■□□ 2.22
NEK4P2-201ENST00000580004 RIMS1Q86UR5 1692 aaKnown RBP28.92■■■□□ 2.22
NEK4P2-201ENST00000580004 CROCC2H7BZ55 1655 aa28.91■■■□□ 2.22
NEK4P2-201ENST00000580004 SHANK2Q9UPX8 1470 aa28.91■■■□□ 2.22
NEK4P2-201ENST00000580004 DNMT1P26358 1616 aaKnown RBP28.9■■■□□ 2.22
NEK4P2-201ENST00000580004 DHX29Q7Z478 1369 aaKnown RBP28.87■■■□□ 2.21
NEK4P2-201ENST00000580004 MLECQ14165 292 aa28.85■■■□□ 2.21
NEK4P2-201ENST00000580004 ABCC5O15440 1437 aa28.83■■■□□ 2.21
NEK4P2-201ENST00000580004 DAPK1P53355 1430 aa28.83■■■□□ 2.21
NEK4P2-201ENST00000580004 CNTLNQ9NXG0 1405 aa28.8■■■□□ 2.2
NEK4P2-201ENST00000580004 PPP6R1Q9UPN7 881 aa28.79■■■□□ 2.2
NEK4P2-201ENST00000580004 EIF2AK4Q9P2K8 1649 aaKnown RBP28.77■■■□□ 2.2
NEK4P2-201ENST00000580004 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
NEK4P2-201ENST00000580004 FAM135AQ9P2D6 1515 aa28.76■■■□□ 2.19
NEK4P2-201ENST00000580004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.75■■■□□ 2.19
NEK4P2-201ENST00000580004 ESF1Q9H501 851 aaKnown RBP28.75■■■□□ 2.19
NEK4P2-201ENST00000580004 DUOX2Q9NRD8 1548 aa28.74■■■□□ 2.19
NEK4P2-201ENST00000580004 FAM50AQ14320 339 aaKnown RBP28.71■■■□□ 2.19
NEK4P2-201ENST00000580004 ADGRL2O95490 1459 aa28.7■■■□□ 2.18
NEK4P2-201ENST00000580004 ANKRD30AQ9BXX3 1397 aa28.69■■■□□ 2.18
NEK4P2-201ENST00000580004 C3P01024 1663 aa28.69■■■□□ 2.18
NEK4P2-201ENST00000580004 RNF17Q9BXT8 1623 aaKnown RBP28.69■■■□□ 2.18
NEK4P2-201ENST00000580004 ERBINQ96RT1 1412 aa28.68■■■□□ 2.18
NEK4P2-201ENST00000580004 KIF15Q9NS87 1388 aa28.67■■■□□ 2.18
NEK4P2-201ENST00000580004 SETD1BQ9UPS6 1966 aaKnown RBP28.67■■■□□ 2.18
NEK4P2-201ENST00000580004 KIF3BO15066 747 aa28.66■■■□□ 2.18
NEK4P2-201ENST00000580004 CLTCQ00610 1675 aaKnown RBP28.66■■■□□ 2.18
NEK4P2-201ENST00000580004 GGT6Q6P531 493 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms