RNA–Protein interactions for RNA: ENST00000579880.5

NDEL1-206, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-206ENST00000579880 POGZQ7Z3K3 1410 aa27.95■■■□□ 2.07
NDEL1-206ENST00000579880 ARHGAP5Q13017 1502 aa27.93■■■□□ 2.06
NDEL1-206ENST00000579880 MAGI2Q86UL8 1455 aa27.93■■■□□ 2.06
NDEL1-206ENST00000579880 ZFYVE16Q7Z3T8 1539 aa27.92■■■□□ 2.06
NDEL1-206ENST00000579880 ADAMTSL3P82987 1691 aa27.92■■■□□ 2.06
NDEL1-206ENST00000579880 YEATS2Q9ULM3 1422 aa27.9■■■□□ 2.06
NDEL1-206ENST00000579880 BCORL1Q5H9F3 1711 aa27.89■■■□□ 2.06
NDEL1-206ENST00000579880 HECW2Q9P2P5 1572 aa27.86■■■□□ 2.05
NDEL1-206ENST00000579880 PTPRMP28827 1452 aa27.84■■■□□ 2.05
NDEL1-206ENST00000579880 PREX2Q70Z35 1606 aa27.83■■■□□ 2.05
NDEL1-206ENST00000579880 ZNF518AQ6AHZ1 1483 aa27.83■■■□□ 2.04
NDEL1-206ENST00000579880 CDC42BPBQ9Y5S2 1711 aa27.82■■■□□ 2.04
NDEL1-206ENST00000579880 CEP162Q5TB80 1403 aa27.82■■■□□ 2.04
NDEL1-206ENST00000579880 MADDQ8WXG6 1647 aa27.81■■■□□ 2.04
NDEL1-206ENST00000579880 AFAP1Q8N556 730 aa27.77■■■□□ 2.04
NDEL1-206ENST00000579880 KDM5CP41229 1560 aa27.77■■■□□ 2.04
NDEL1-206ENST00000579880 ATP10AO60312 1499 aa27.76■■■□□ 2.04
NDEL1-206ENST00000579880 SIGLEC1Q9BZZ2 1709 aa27.75■■■□□ 2.03
NDEL1-206ENST00000579880 ABCC1P33527 1531 aa27.75■■■□□ 2.03
NDEL1-206ENST00000579880 CDC42BPAQ5VT25 1732 aa27.75■■■□□ 2.03
NDEL1-206ENST00000579880 C9orf84Q5VXU9 1444 aa27.75■■■□□ 2.03
NDEL1-206ENST00000579880 MYT1LQ9UL68 1186 aa27.72■■■□□ 2.03
NDEL1-206ENST00000579880 MTUS2Q5JR59 1369 aa27.72■■■□□ 2.03
NDEL1-206ENST00000579880 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
NDEL1-206ENST00000579880 ARHGEF12Q9NZN5 1544 aa27.71■■■□□ 2.03
NDEL1-206ENST00000579880 TRAPPC8Q9Y2L5 1435 aa27.7■■■□□ 2.03
NDEL1-206ENST00000579880 MLECQ14165 292 aa27.7■■■□□ 2.02
NDEL1-206ENST00000579880 GPATCH8Q9UKJ3 1502 aaKnown RBP27.69■■■□□ 2.02
NDEL1-206ENST00000579880 ITSN2Q9NZM3 1697 aa27.68■■■□□ 2.02
NDEL1-206ENST00000579880 MLH3Q9UHC1 1453 aa27.68■■■□□ 2.02
NDEL1-206ENST00000579880 ZNF777Q9ULD5 760 aaPredicted RBP27.66■■■□□ 2.02
NDEL1-206ENST00000579880 DIP2CQ9Y2E4 1556 aa27.65■■■□□ 2.02
NDEL1-206ENST00000579880 CCNB3Q8WWL7 1395 aa27.64■■■□□ 2.02
NDEL1-206ENST00000579880 LOC105371045A0A1W2PR82 267 aa27.64■■■□□ 2.02
NDEL1-206ENST00000579880 SAMD9LQ8IVG5 1584 aa27.64■■■□□ 2.01
NDEL1-206ENST00000579880 EHBP1L1Q8N3D4 1523 aa27.62■■■□□ 2.01
NDEL1-206ENST00000579880 ABCA6Q8N139 1617 aa27.61■■■□□ 2.01
NDEL1-206ENST00000579880 CFDP1Q9UEE9 299 aaPredicted RBP27.61■■■□□ 2.01
NDEL1-206ENST00000579880 REREQ9P2R6 1566 aa27.6■■■□□ 2.01
NDEL1-206ENST00000579880 FER1L4A9Z1Z3 1794 aa27.6■■■□□ 2.01
NDEL1-206ENST00000579880 SYCP2Q9BX26 1530 aa27.6■■■□□ 2.01
NDEL1-206ENST00000579880 PLPPR3Q6T4P5 718 aa27.59■■■□□ 2.01
NDEL1-206ENST00000579880 PLEKHH2Q8IVE3 1493 aa27.57■■■□□ 2
NDEL1-206ENST00000579880 HNRNPMP52272 730 aaKnown RBP eCLIP27.56■■■□□ 2
NDEL1-206ENST00000579880 KIAA1107Q9UPP5 1409 aa27.55■■■□□ 2
NDEL1-206ENST00000579880 KIDINS220Q9ULH0 1771 aa27.55■■■□□ 2
NDEL1-206ENST00000579880 TIAM1Q13009 1591 aa27.54■■■□□ 2
NDEL1-206ENST00000579880 LMTK3Q96Q04 1460 aa27.54■■■□□ 2
NDEL1-206ENST00000579880 VPS8Q8N3P4 1428 aa27.52■■■□□ 2
NDEL1-206ENST00000579880 SPAG9O60271 1321 aaKnown RBP27.52■■■□□ 2
NDEL1-206ENST00000579880 AGLP35573 1532 aa27.51■■■□□ 2
NDEL1-206ENST00000579880 NCOA2Q15596 1464 aa27.45■■□□□ 1.99
NDEL1-206ENST00000579880 ATP7AQ04656 1500 aa27.45■■□□□ 1.98
NDEL1-206ENST00000579880 SUPT6HQ7KZ85 1726 aaKnown RBP27.44■■□□□ 1.98
NDEL1-206ENST00000579880 ZNF644Q9H582 1327 aaPredicted RBP27.44■■□□□ 1.98
NDEL1-206ENST00000579880 CEBPAP49715 358 aaPredicted RBP27.43■■□□□ 1.98
NDEL1-206ENST00000579880 INO80Q9ULG1 1556 aaPredicted RBP27.43■■□□□ 1.98
NDEL1-206ENST00000579880 HSPA2P54652 639 aa27.4■■□□□ 1.98
NDEL1-206ENST00000579880 ESF1Q9H501 851 aaKnown RBP27.4■■□□□ 1.98
NDEL1-206ENST00000579880 MBD5Q9P267 1494 aa27.39■■□□□ 1.98
NDEL1-206ENST00000579880 LRRC9Q6ZRR7 1453 aa27.38■■□□□ 1.97
NDEL1-206ENST00000579880 A2MP01023 1474 aa27.37■■□□□ 1.97
NDEL1-206ENST00000579880 CNTLNQ9NXG0 1405 aa27.34■■□□□ 1.97
NDEL1-206ENST00000579880 MAP3K1Q13233 1512 aa27.34■■□□□ 1.97
NDEL1-206ENST00000579880 PLXNC1O60486 1568 aa27.34■■□□□ 1.97
NDEL1-206ENST00000579880 PREX1Q8TCU6 1659 aa27.33■■□□□ 1.97
NDEL1-206ENST00000579880 CAMSAP2Q08AD1 1489 aa27.33■■□□□ 1.97
NDEL1-206ENST00000579880 ILDR1Q86SU0 546 aaPredicted RBP27.33■■□□□ 1.97
NDEL1-206ENST00000579880 C3P01024 1663 aa27.31■■□□□ 1.96
NDEL1-206ENST00000579880 RTEL1-TNFRSF6BF6WH68 1400 aa27.31■■□□□ 1.96
NDEL1-206ENST00000579880 CCDC141Q6ZP82 1450 aa27.3■■□□□ 1.96
NDEL1-206ENST00000579880 ADGBQ8N7X0 1667 aa27.29■■□□□ 1.96
NDEL1-206ENST00000579880 UHRF1BP1Q6BDS2 1440 aa27.28■■□□□ 1.96
NDEL1-206ENST00000579880 KANK4Q5T7N3 995 aaPredicted RBP27.28■■□□□ 1.96
NDEL1-206ENST00000579880 RSPH4AQ5TD94 716 aa27.28■■□□□ 1.96
NDEL1-206ENST00000579880 MROH2AA6NES4 1674 aa27.24■■□□□ 1.95
NDEL1-206ENST00000579880 GGT6Q6P531 493 aa27.23■■□□□ 1.95
NDEL1-206ENST00000579880 ARHGEF5Q12774 1597 aa27.22■■□□□ 1.95
NDEL1-206ENST00000579880 ZMYM3Q14202 1370 aa27.21■■□□□ 1.95
NDEL1-206ENST00000579880 DHX29Q7Z478 1369 aaKnown RBP27.21■■□□□ 1.95
NDEL1-206ENST00000579880 SETD1BQ9UPS6 1966 aaKnown RBP27.2■■□□□ 1.95
NDEL1-206ENST00000579880 APLP2Q06481 763 aa27.19■■□□□ 1.94
NDEL1-206ENST00000579880 CLTCQ00610 1675 aaKnown RBP27.17■■□□□ 1.94
NDEL1-206ENST00000579880 NPATQ14207 1427 aa27.17■■□□□ 1.94
NDEL1-206ENST00000579880 MYOM3Q5VTT5 1437 aa27.17■■□□□ 1.94
NDEL1-206ENST00000579880 TSPY4P0CV99 314 aa27.17■■□□□ 1.94
NDEL1-206ENST00000579880 TSPY10P0CW01 314 aa27.17■■□□□ 1.94
NDEL1-206ENST00000579880 PPP6R1Q9UPN7 881 aa27.17■■□□□ 1.94
NDEL1-206ENST00000579880 MIA2Q96PC5 1412 aa27.16■■□□□ 1.94
NDEL1-206ENST00000579880 KIF3BO15066 747 aa27.12■■□□□ 1.93
NDEL1-206ENST00000579880 MAST1Q9Y2H9 1570 aa27.09■■□□□ 1.93
NDEL1-206ENST00000579880 FBXO41Q8TF61 875 aa27.08■■□□□ 1.93
NDEL1-206ENST00000579880 DMRT2Q9Y5R5 561 aa27.08■■□□□ 1.93
NDEL1-206ENST00000579880 PTPRKQ15262 1439 aa27.07■■□□□ 1.92
NDEL1-206ENST00000579880 STRCQ7RTU9 1775 aa27.07■■□□□ 1.92
NDEL1-206ENST00000579880 FAM135AQ9P2D6 1515 aa27.03■■□□□ 1.92
NDEL1-206ENST00000579880 KDM5DQ9BY66 1539 aa27.02■■□□□ 1.92
NDEL1-206ENST00000579880 MYO3AQ8NEV4 1616 aa27.01■■□□□ 1.91
NDEL1-206ENST00000579880 NCOA1Q15788 1441 aa27■■□□□ 1.91
NDEL1-206ENST00000579880 PTPN23Q9H3S7 1636 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms