RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 ZMYM4Q5VZL5 1548 aa38.2■■■■□ 3.71
CDKN2A-214ENST00000579755 MAGI2Q86UL8 1455 aa38.19■■■■□ 3.7
CDKN2A-214ENST00000579755 POGZQ7Z3K3 1410 aa38.19■■■■□ 3.7
CDKN2A-214ENST00000579755 ZFYVE16Q7Z3T8 1539 aa38.18■■■■□ 3.7
CDKN2A-214ENST00000579755 ADAMTSL3P82987 1691 aa38.15■■■■□ 3.7
CDKN2A-214ENST00000579755 MYT1LQ9UL68 1186 aa38.14■■■■□ 3.7
CDKN2A-214ENST00000579755 BCORL1Q5H9F3 1711 aa38.14■■■■□ 3.7
CDKN2A-214ENST00000579755 YEATS2Q9ULM3 1422 aa38.13■■■■□ 3.7
CDKN2A-214ENST00000579755 PTPRMP28827 1452 aa38.09■■■■□ 3.69
CDKN2A-214ENST00000579755 HECW2Q9P2P5 1572 aa38.08■■■■□ 3.69
CDKN2A-214ENST00000579755 AFAP1Q8N556 730 aa38.06■■■■□ 3.68
CDKN2A-214ENST00000579755 ZNF518AQ6AHZ1 1483 aa38.06■■■■□ 3.68
CDKN2A-214ENST00000579755 CDC42BPBQ9Y5S2 1711 aa38.06■■■■□ 3.68
CDKN2A-214ENST00000579755 MLECQ14165 292 aa38.03■■■■□ 3.68
CDKN2A-214ENST00000579755 CEP162Q5TB80 1403 aa38.03■■■■□ 3.68
CDKN2A-214ENST00000579755 PREX2Q70Z35 1606 aa38.02■■■■□ 3.68
CDKN2A-214ENST00000579755 MADDQ8WXG6 1647 aa38.02■■■■□ 3.68
CDKN2A-214ENST00000579755 ATP10AO60312 1499 aa38.01■■■■□ 3.67
CDKN2A-214ENST00000579755 ZNF777Q9ULD5 760 aaPredicted RBP37.98■■■■□ 3.67
CDKN2A-214ENST00000579755 MTUS2Q5JR59 1369 aa37.96■■■■□ 3.67
CDKN2A-214ENST00000579755 C9orf84Q5VXU9 1444 aa37.95■■■■□ 3.67
CDKN2A-214ENST00000579755 PLPPR3Q6T4P5 718 aa37.94■■■■□ 3.66
CDKN2A-214ENST00000579755 CDC42BPAQ5VT25 1732 aa37.94■■■■□ 3.66
CDKN2A-214ENST00000579755 RIMS1Q86UR5 1692 aaKnown RBP37.93■■■■□ 3.66
CDKN2A-214ENST00000579755 KDM5CP41229 1560 aa37.91■■■■□ 3.66
CDKN2A-214ENST00000579755 LOC105371045A0A1W2PR82 267 aa37.9■■■■□ 3.66
CDKN2A-214ENST00000579755 SIGLEC1Q9BZZ2 1709 aa37.89■■■■□ 3.66
CDKN2A-214ENST00000579755 ABCC1P33527 1531 aa37.88■■■■□ 3.65
CDKN2A-214ENST00000579755 CCNB3Q8WWL7 1395 aa37.88■■■■□ 3.65
CDKN2A-214ENST00000579755 CFDP1Q9UEE9 299 aaPredicted RBP37.87■■■■□ 3.65
CDKN2A-214ENST00000579755 TRAPPC8Q9Y2L5 1435 aa37.87■■■■□ 3.65
CDKN2A-214ENST00000579755 GPATCH8Q9UKJ3 1502 aaKnown RBP37.86■■■■□ 3.65
CDKN2A-214ENST00000579755 ARHGEF12Q9NZN5 1544 aa37.84■■■■□ 3.65
CDKN2A-214ENST00000579755 ITSN2Q9NZM3 1697 aa37.84■■■■□ 3.65
CDKN2A-214ENST00000579755 MLH3Q9UHC1 1453 aa37.83■■■■□ 3.65
CDKN2A-214ENST00000579755 HNRNPMP52272 730 aaKnown RBP eCLIP37.78■■■■□ 3.64
CDKN2A-214ENST00000579755 FER1L4A9Z1Z3 1794 aa37.78■■■■□ 3.64
CDKN2A-214ENST00000579755 DIP2CQ9Y2E4 1556 aa37.76■■■■□ 3.64
CDKN2A-214ENST00000579755 SAMD9LQ8IVG5 1584 aa37.75■■■■□ 3.63
CDKN2A-214ENST00000579755 EHBP1L1Q8N3D4 1523 aa37.74■■■■□ 3.63
CDKN2A-214ENST00000579755 PLEKHH2Q8IVE3 1493 aa37.72■■■■□ 3.63
CDKN2A-214ENST00000579755 SPAG9O60271 1321 aaKnown RBP37.71■■■■□ 3.63
CDKN2A-214ENST00000579755 ABCA6Q8N139 1617 aa37.71■■■■□ 3.63
CDKN2A-214ENST00000579755 SYCP2Q9BX26 1530 aa37.71■■■■□ 3.63
CDKN2A-214ENST00000579755 ESF1Q9H501 851 aaKnown RBP37.69■■■■□ 3.62
CDKN2A-214ENST00000579755 KIAA1107Q9UPP5 1409 aa37.68■■■■□ 3.62
CDKN2A-214ENST00000579755 REREQ9P2R6 1566 aa37.68■■■■□ 3.62
CDKN2A-214ENST00000579755 KIDINS220Q9ULH0 1771 aa37.65■■■■□ 3.62
CDKN2A-214ENST00000579755 LMTK3Q96Q04 1460 aa37.63■■■■□ 3.61
CDKN2A-214ENST00000579755 TIAM1Q13009 1591 aa37.61■■■■□ 3.61
CDKN2A-214ENST00000579755 CEBPAP49715 358 aaPredicted RBP37.61■■■■□ 3.61
CDKN2A-214ENST00000579755 VPS8Q8N3P4 1428 aa37.61■■■■□ 3.61
CDKN2A-214ENST00000579755 AGLP35573 1532 aa37.59■■■■□ 3.61
CDKN2A-214ENST00000579755 ZNF644Q9H582 1327 aaPredicted RBP37.58■■■■□ 3.61
CDKN2A-214ENST00000579755 HSPA2P54652 639 aa37.56■■■■□ 3.6
CDKN2A-214ENST00000579755 SUPT6HQ7KZ85 1726 aaKnown RBP37.56■■■■□ 3.6
CDKN2A-214ENST00000579755 NCOA2Q15596 1464 aa37.52■■■■□ 3.6
CDKN2A-214ENST00000579755 ATP7AQ04656 1500 aa37.52■■■■□ 3.6
CDKN2A-214ENST00000579755 ILDR1Q86SU0 546 aaPredicted RBP37.48■■■■□ 3.59
CDKN2A-214ENST00000579755 INO80Q9ULG1 1556 aaPredicted RBP37.44■■■■□ 3.58
CDKN2A-214ENST00000579755 A2MP01023 1474 aa37.43■■■■□ 3.58
CDKN2A-214ENST00000579755 LRRC9Q6ZRR7 1453 aa37.42■■■■□ 3.58
CDKN2A-214ENST00000579755 MBD5Q9P267 1494 aa37.42■■■■□ 3.58
CDKN2A-214ENST00000579755 CNTLNQ9NXG0 1405 aa37.42■■■■□ 3.58
CDKN2A-214ENST00000579755 APLP2Q06481 763 aa37.41■■■■□ 3.58
CDKN2A-214ENST00000579755 RSPH4AQ5TD94 716 aa37.41■■■■□ 3.58
CDKN2A-214ENST00000579755 PREX1Q8TCU6 1659 aa37.4■■■■□ 3.58
CDKN2A-214ENST00000579755 SETD1BQ9UPS6 1966 aaKnown RBP37.37■■■■□ 3.57
CDKN2A-214ENST00000579755 UHRF1BP1Q6BDS2 1440 aa37.36■■■■□ 3.57
CDKN2A-214ENST00000579755 GGT6Q6P531 493 aa37.36■■■■□ 3.57
CDKN2A-214ENST00000579755 CAMSAP2Q08AD1 1489 aa37.36■■■■□ 3.57
CDKN2A-214ENST00000579755 C3P01024 1663 aa37.36■■■■□ 3.57
CDKN2A-214ENST00000579755 RTEL1-TNFRSF6BF6WH68 1400 aa37.36■■■■□ 3.57
CDKN2A-214ENST00000579755 MAP3K1Q13233 1512 aa37.35■■■■□ 3.57
CDKN2A-214ENST00000579755 KANK4Q5T7N3 995 aaPredicted RBP37.34■■■■□ 3.57
CDKN2A-214ENST00000579755 ADGBQ8N7X0 1667 aa37.34■■■■□ 3.57
CDKN2A-214ENST00000579755 CCDC141Q6ZP82 1450 aa37.32■■■■□ 3.56
CDKN2A-214ENST00000579755 TSPY4P0CV99 314 aa37.31■■■■□ 3.56
CDKN2A-214ENST00000579755 TSPY10P0CW01 314 aa37.31■■■■□ 3.56
CDKN2A-214ENST00000579755 PLXNC1O60486 1568 aa37.29■■■■□ 3.56
CDKN2A-214ENST00000579755 ZMYM3Q14202 1370 aa37.27■■■■□ 3.56
CDKN2A-214ENST00000579755 PPP6R1Q9UPN7 881 aa37.25■■■■□ 3.55
CDKN2A-214ENST00000579755 DHX29Q7Z478 1369 aaKnown RBP37.25■■■■□ 3.55
CDKN2A-214ENST00000579755 MROH2AA6NES4 1674 aa37.22■■■■□ 3.55
CDKN2A-214ENST00000579755 DMRT2Q9Y5R5 561 aa37.2■■■■□ 3.55
CDKN2A-214ENST00000579755 CLTCQ00610 1675 aaKnown RBP37.19■■■■□ 3.54
CDKN2A-214ENST00000579755 KIF3BO15066 747 aa37.19■■■■□ 3.54
CDKN2A-214ENST00000579755 ARHGEF5Q12774 1597 aa37.18■■■■□ 3.54
CDKN2A-214ENST00000579755 MYOM3Q5VTT5 1437 aa37.17■■■■□ 3.54
CDKN2A-214ENST00000579755 NPATQ14207 1427 aa37.16■■■■□ 3.54
CDKN2A-214ENST00000579755 MIA2Q96PC5 1412 aa37.14■■■■□ 3.54
CDKN2A-214ENST00000579755 FBXO41Q8TF61 875 aa37.14■■■■□ 3.54
CDKN2A-214ENST00000579755 WASHC2CQ9Y4E1 1318 aa37.04■■■■□ 3.52
CDKN2A-214ENST00000579755 STRCQ7RTU9 1775 aa37.04■■■■□ 3.52
CDKN2A-214ENST00000579755 PTPRKQ15262 1439 aa37.02■■■■□ 3.52
CDKN2A-214ENST00000579755 CERKQ8TCT0 537 aa36.98■■■■□ 3.51
CDKN2A-214ENST00000579755 MAST1Q9Y2H9 1570 aa36.98■■■■□ 3.51
CDKN2A-214ENST00000579755 KDM5DQ9BY66 1539 aa36.94■■■■□ 3.5
CDKN2A-214ENST00000579755 PTPRTO14522 1441 aa36.93■■■■□ 3.5
CDKN2A-214ENST00000579755 CAMSAP1Q5T5Y3 1602 aa36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms