RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 CUL7Q14999 1698 aa21.42■■□□□ 1.02
CCR7-203ENST00000579344 MTUS2Q5JR59 1369 aa21.42■■□□□ 1.02
CCR7-203ENST00000579344 ARID4BQ4LE39 1312 aaPredicted RBP21.42■■□□□ 1.02
CCR7-203ENST00000579344 UGGT2Q9NYU1 1516 aa21.42■■□□□ 1.02
CCR7-203ENST00000579344 RPRD2Q5VT52 1461 aaKnown RBP21.4■■□□□ 1.02
CCR7-203ENST00000579344 TEX14Q8IWB6 1497 aa21.4■■□□□ 1.02
CCR7-203ENST00000579344 DHX29Q7Z478 1369 aaKnown RBP21.4■■□□□ 1.02
CCR7-203ENST00000579344 KIF7Q2M1P5 1343 aa21.4■■□□□ 1.02
CCR7-203ENST00000579344 SAMD9Q5K651 1589 aa21.38■■□□□ 1.01
CCR7-203ENST00000579344 NEFMP07197 916 aa21.37■■□□□ 1.01
CCR7-203ENST00000579344 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
CCR7-203ENST00000579344 DDRGK1Q96HY6 314 aa21.35■■□□□ 1.01
CCR7-203ENST00000579344 BACH2Q9BYV9 841 aa21.35■■□□□ 1.01
CCR7-203ENST00000579344 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
CCR7-203ENST00000579344 L3MBTL2Q969R5 705 aa21.34■■□□□ 1.01
CCR7-203ENST00000579344 KTN1Q86UP2 1357 aaKnown RBP21.33■■□□□ 1
CCR7-203ENST00000579344 ABCA10Q8WWZ4 1543 aa21.32■■□□□ 1
CCR7-203ENST00000579344 PDE4AP27815 886 aa21.32■■□□□ 1
CCR7-203ENST00000579344 LRPPRCP42704 1394 aaKnown RBP21.31■■□□□ 1
CCR7-203ENST00000579344 ANKRD30BQ9BXX2 1392 aa21.31■■□□□ 1
CCR7-203ENST00000579344 LRRIQ1Q96JM4 1722 aa21.3■■□□□ 1
CCR7-203ENST00000579344 ROCK2O75116 1388 aaKnown RBP21.3■■□□□ 1
CCR7-203ENST00000579344 GSE1Q14687 1217 aa21.28■■□□□ 1
CCR7-203ENST00000579344 MPHOSPH9Q99550 1183 aa21.28■■□□□ 1
CCR7-203ENST00000579344 PNISRQ8TF01 805 aaKnown RBP21.27■■□□□ 1
CCR7-203ENST00000579344 ROCK1Q13464 1354 aa21.27■■□□□ 1
CCR7-203ENST00000579344 RRP1P56182 461 aaKnown RBP21.26■□□□□ 0.99
CCR7-203ENST00000579344 MBD5Q9P267 1494 aa21.25■□□□□ 0.99
CCR7-203ENST00000579344 ATP1B4Q9UN42 357 aaPredicted RBP21.25■□□□□ 0.99
CCR7-203ENST00000579344 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
CCR7-203ENST00000579344 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
CCR7-203ENST00000579344 INSRP06213 1382 aa21.23■□□□□ 0.99
CCR7-203ENST00000579344 PDE3BQ13370 1112 aa21.23■□□□□ 0.99
CCR7-203ENST00000579344 NBPF8Q3BBV2 869 aa21.23■□□□□ 0.99
CCR7-203ENST00000579344 KDM6BO15054 1643 aa21.23■□□□□ 0.99
CCR7-203ENST00000579344 BRD4O60885 1362 aaPredicted RBP21.22■□□□□ 0.99
CCR7-203ENST00000579344 ZMYM4Q5VZL5 1548 aa21.21■□□□□ 0.99
CCR7-203ENST00000579344 RSPH6AQ9H0K4 717 aa21.21■□□□□ 0.99
CCR7-203ENST00000579344 RTN4Q9NQC3 1192 aaKnown RBP21.2■□□□□ 0.98
CCR7-203ENST00000579344 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
CCR7-203ENST00000579344 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
CCR7-203ENST00000579344 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
CCR7-203ENST00000579344 FAM43AQ8N2R8 423 aa21.16■□□□□ 0.98
CCR7-203ENST00000579344 KIF14Q15058 1648 aa21.16■□□□□ 0.98
CCR7-203ENST00000579344 KIF15Q9NS87 1388 aa21.15■□□□□ 0.98
CCR7-203ENST00000579344 BCORL1Q5H9F3 1711 aa21.14■□□□□ 0.98
CCR7-203ENST00000579344 KDM5CP41229 1560 aa21.14■□□□□ 0.98
CCR7-203ENST00000579344 MAGI3Q5TCQ9 1506 aa21.14■□□□□ 0.98
CCR7-203ENST00000579344 RRP7BPQ9NSQ0 103 aa21.13■□□□□ 0.97
CCR7-203ENST00000579344 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.13■□□□□ 0.97
CCR7-203ENST00000579344 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
CCR7-203ENST00000579344 EXOC6Q8TAG9 804 aa21.13■□□□□ 0.97
CCR7-203ENST00000579344 RCAN3Q9UKA8 241 aa21.13■□□□□ 0.97
CCR7-203ENST00000579344 BRPF3Q9ULD4 1205 aa21.13■□□□□ 0.97
CCR7-203ENST00000579344 NFKBIBQ15653 356 aa21.12■□□□□ 0.97
CCR7-203ENST00000579344 RALBP1Q15311 655 aa21.11■□□□□ 0.97
CCR7-203ENST00000579344 UHRF1BP1Q6BDS2 1440 aa21.1■□□□□ 0.97
CCR7-203ENST00000579344 USP47Q96K76 1375 aa21.1■□□□□ 0.97
CCR7-203ENST00000579344 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
CCR7-203ENST00000579344 MYBBP1AQ9BQG0 1328 aaKnown RBP21.08■□□□□ 0.97
CCR7-203ENST00000579344 DNMT1P26358 1616 aaKnown RBP21.07■□□□□ 0.96
CCR7-203ENST00000579344 E9PCH4 1651 aa21.06■□□□□ 0.96
CCR7-203ENST00000579344 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
CCR7-203ENST00000579344 RALGAPBQ86X10 1494 aa21.05■□□□□ 0.96
CCR7-203ENST00000579344 FRAT1Q92837 279 aaPredicted RBP21.05■□□□□ 0.96
CCR7-203ENST00000579344 PLEKHH2Q8IVE3 1493 aa21.04■□□□□ 0.96
CCR7-203ENST00000579344 DAPK1P53355 1430 aa21.03■□□□□ 0.96
CCR7-203ENST00000579344 GAPVD1Q14C86 1478 aa21.02■□□□□ 0.96
CCR7-203ENST00000579344 ARHGEF12Q9NZN5 1544 aa21.01■□□□□ 0.95
CCR7-203ENST00000579344 TOPBP1Q92547 1522 aa21.01■□□□□ 0.95
CCR7-203ENST00000579344 PZPP20742 1482 aa21■□□□□ 0.95
CCR7-203ENST00000579344 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
CCR7-203ENST00000579344 NESP48681 1621 aa20.99■□□□□ 0.95
CCR7-203ENST00000579344 CHIC2Q9UKJ5 165 aa20.98■□□□□ 0.95
CCR7-203ENST00000579344 EPRSP07814 1512 aaKnown RBP20.98■□□□□ 0.95
CCR7-203ENST00000579344 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
CCR7-203ENST00000579344 KDM2BQ8NHM5 1336 aa20.97■□□□□ 0.95
CCR7-203ENST00000579344 KIAA1107Q9UPP5 1409 aa20.97■□□□□ 0.95
CCR7-203ENST00000579344 ABCC5O15440 1437 aa20.96■□□□□ 0.95
CCR7-203ENST00000579344 BLMP54132 1417 aaPredicted RBP20.95■□□□□ 0.94
CCR7-203ENST00000579344 PARD3Q8TEW0 1356 aa20.95■□□□□ 0.94
CCR7-203ENST00000579344 DAXXQ9UER7 740 aaPredicted RBP20.95■□□□□ 0.94
CCR7-203ENST00000579344 NLRP13Q86W25 1043 aa20.94■□□□□ 0.94
CCR7-203ENST00000579344 FOXD1Q16676 465 aa20.92■□□□□ 0.94
CCR7-203ENST00000579344 FAM161AQ3B820 660 aa20.92■□□□□ 0.94
CCR7-203ENST00000579344 CENPQQ7L2Z9 268 aaPredicted RBP20.92■□□□□ 0.94
CCR7-203ENST00000579344 SLC4A1APQ9BWU0 796 aaKnown RBP20.92■□□□□ 0.94
CCR7-203ENST00000579344 EIF5BO60841 1220 aaKnown RBP20.9■□□□□ 0.94
CCR7-203ENST00000579344 WDR62O43379 1518 aa20.89■□□□□ 0.94
CCR7-203ENST00000579344 ADGRL2O95490 1459 aa20.89■□□□□ 0.93
CCR7-203ENST00000579344 GLIPR1L2Q4G1C9 344 aa20.88■□□□□ 0.93
CCR7-203ENST00000579344 ADGBQ8N7X0 1667 aa20.87■□□□□ 0.93
CCR7-203ENST00000579344 C8orf34Q49A92 452 aa20.86■□□□□ 0.93
CCR7-203ENST00000579344 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
CCR7-203ENST00000579344 L1TD1Q5T7N2 865 aaKnown RBP20.84■□□□□ 0.93
CCR7-203ENST00000579344 CRBNQ96SW2 442 aa20.84■□□□□ 0.93
CCR7-203ENST00000579344 DCAF11Q8TEB1 546 aa20.81■□□□□ 0.92
CCR7-203ENST00000579344 FRAT2O75474 233 aaPredicted RBP20.81■□□□□ 0.92
CCR7-203ENST00000579344 KDM5DQ9BY66 1539 aa20.79■□□□□ 0.92
CCR7-203ENST00000579344 VIRMAQ69YN4 1812 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms