RNA–Protein interactions for RNA: ENST00000578993.5

LIMD2-206, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-206ENST00000578993 BCORL1Q5H9F3 1711 aa32.97■■■□□ 2.87
LIMD2-206ENST00000578993 SIGLEC1Q9BZZ2 1709 aa32.96■■■□□ 2.87
LIMD2-206ENST00000578993 POGZQ7Z3K3 1410 aa32.95■■■□□ 2.87
LIMD2-206ENST00000578993 EFCAB2Q5VUJ9 269 aa32.93■■■□□ 2.86
LIMD2-206ENST00000578993 YEATS2Q9ULM3 1422 aa32.93■■■□□ 2.86
LIMD2-206ENST00000578993 ARHGAP5Q13017 1502 aa32.92■■■□□ 2.86
LIMD2-206ENST00000578993 ZFYVE16Q7Z3T8 1539 aa32.91■■■□□ 2.86
LIMD2-206ENST00000578993 PREX2Q70Z35 1606 aa32.91■■■□□ 2.86
LIMD2-206ENST00000578993 CDC42BPAQ5VT25 1732 aa32.88■■■□□ 2.85
LIMD2-206ENST00000578993 MAGI2Q86UL8 1455 aa32.87■■■□□ 2.85
LIMD2-206ENST00000578993 MADDQ8WXG6 1647 aa32.85■■■□□ 2.85
LIMD2-206ENST00000578993 HECW2Q9P2P5 1572 aa32.85■■■□□ 2.85
LIMD2-206ENST00000578993 CEP162Q5TB80 1403 aa32.85■■■□□ 2.85
LIMD2-206ENST00000578993 ARID4BQ4LE39 1312 aaPredicted RBP32.82■■■□□ 2.84
LIMD2-206ENST00000578993 PTPRMP28827 1452 aa32.81■■■□□ 2.84
LIMD2-206ENST00000578993 KDM5CP41229 1560 aa32.8■■■□□ 2.84
LIMD2-206ENST00000578993 ZNF518AQ6AHZ1 1483 aa32.78■■■□□ 2.84
LIMD2-206ENST00000578993 ARHGEF12Q9NZN5 1544 aa32.77■■■□□ 2.84
LIMD2-206ENST00000578993 ABCC1P33527 1531 aa32.77■■■□□ 2.84
LIMD2-206ENST00000578993 ITSN2Q9NZM3 1697 aa32.76■■■□□ 2.84
LIMD2-206ENST00000578993 AFAP1Q8N556 730 aa32.75■■■□□ 2.83
LIMD2-206ENST00000578993 RIMS1Q86UR5 1692 aaKnown RBP32.75■■■□□ 2.83
LIMD2-206ENST00000578993 ATP10AO60312 1499 aa32.72■■■□□ 2.83
LIMD2-206ENST00000578993 LOC105371045A0A1W2PR82 267 aa32.71■■■□□ 2.83
LIMD2-206ENST00000578993 GPATCH8Q9UKJ3 1502 aaKnown RBP32.7■■■□□ 2.83
LIMD2-206ENST00000578993 TRAPPC8Q9Y2L5 1435 aa32.69■■■□□ 2.82
LIMD2-206ENST00000578993 SAMD9LQ8IVG5 1584 aa32.68■■■□□ 2.82
LIMD2-206ENST00000578993 C9orf84Q5VXU9 1444 aa32.67■■■□□ 2.82
LIMD2-206ENST00000578993 DIP2CQ9Y2E4 1556 aa32.66■■■□□ 2.82
LIMD2-206ENST00000578993 ABCA6Q8N139 1617 aa32.65■■■□□ 2.82
LIMD2-206ENST00000578993 FER1L4A9Z1Z3 1794 aa32.64■■■□□ 2.82
LIMD2-206ENST00000578993 MLH3Q9UHC1 1453 aa32.63■■■□□ 2.81
LIMD2-206ENST00000578993 MTUS2Q5JR59 1369 aa32.62■■■□□ 2.81
LIMD2-206ENST00000578993 KIDINS220Q9ULH0 1771 aa32.6■■■□□ 2.81
LIMD2-206ENST00000578993 MLECQ14165 292 aa32.59■■■□□ 2.81
LIMD2-206ENST00000578993 EHBP1L1Q8N3D4 1523 aa32.59■■■□□ 2.81
LIMD2-206ENST00000578993 SYCP2Q9BX26 1530 aa32.58■■■□□ 2.81
LIMD2-206ENST00000578993 REREQ9P2R6 1566 aa32.58■■■□□ 2.81
LIMD2-206ENST00000578993 TIAM1Q13009 1591 aa32.57■■■□□ 2.8
LIMD2-206ENST00000578993 ZNF777Q9ULD5 760 aaPredicted RBP32.56■■■□□ 2.8
LIMD2-206ENST00000578993 CCNB3Q8WWL7 1395 aa32.55■■■□□ 2.8
LIMD2-206ENST00000578993 MYT1LQ9UL68 1186 aa32.52■■■□□ 2.8
LIMD2-206ENST00000578993 CFDP1Q9UEE9 299 aaPredicted RBP32.5■■■□□ 2.79
LIMD2-206ENST00000578993 HNRNPMP52272 730 aaKnown RBP eCLIP32.49■■■□□ 2.79
LIMD2-206ENST00000578993 LMTK3Q96Q04 1460 aa32.48■■■□□ 2.79
LIMD2-206ENST00000578993 VPS8Q8N3P4 1428 aa32.48■■■□□ 2.79
LIMD2-206ENST00000578993 KIAA1107Q9UPP5 1409 aa32.48■■■□□ 2.79
LIMD2-206ENST00000578993 AGLP35573 1532 aa32.45■■■□□ 2.78
LIMD2-206ENST00000578993 PLEKHH2Q8IVE3 1493 aa32.44■■■□□ 2.78
LIMD2-206ENST00000578993 PLPPR3Q6T4P5 718 aa32.44■■■□□ 2.78
LIMD2-206ENST00000578993 SUPT6HQ7KZ85 1726 aaKnown RBP32.43■■■□□ 2.78
LIMD2-206ENST00000578993 INO80Q9ULG1 1556 aaPredicted RBP32.42■■■□□ 2.78
LIMD2-206ENST00000578993 ZNF644Q9H582 1327 aaPredicted RBP32.42■■■□□ 2.78
LIMD2-206ENST00000578993 NCOA2Q15596 1464 aa32.41■■■□□ 2.78
LIMD2-206ENST00000578993 ATP7AQ04656 1500 aa32.39■■■□□ 2.78
LIMD2-206ENST00000578993 SPAG9O60271 1321 aaKnown RBP32.38■■■□□ 2.77
LIMD2-206ENST00000578993 MBD5Q9P267 1494 aa32.36■■■□□ 2.77
LIMD2-206ENST00000578993 CEBPAP49715 358 aaPredicted RBP32.33■■■□□ 2.77
LIMD2-206ENST00000578993 LRRC9Q6ZRR7 1453 aa32.33■■■□□ 2.77
LIMD2-206ENST00000578993 C3P01024 1663 aa32.31■■■□□ 2.76
LIMD2-206ENST00000578993 PLXNC1O60486 1568 aa32.31■■■□□ 2.76
LIMD2-206ENST00000578993 PREX1Q8TCU6 1659 aa32.29■■■□□ 2.76
LIMD2-206ENST00000578993 MAP3K1Q13233 1512 aa32.28■■■□□ 2.76
LIMD2-206ENST00000578993 HSPA2P54652 639 aa32.27■■■□□ 2.76
LIMD2-206ENST00000578993 CAMSAP2Q08AD1 1489 aa32.26■■■□□ 2.75
LIMD2-206ENST00000578993 ADGBQ8N7X0 1667 aa32.26■■■□□ 2.75
LIMD2-206ENST00000578993 KANK4Q5T7N3 995 aaPredicted RBP32.25■■■□□ 2.75
LIMD2-206ENST00000578993 A2MP01023 1474 aa32.24■■■□□ 2.75
LIMD2-206ENST00000578993 SETD1BQ9UPS6 1966 aaKnown RBP32.22■■■□□ 2.75
LIMD2-206ENST00000578993 RTEL1-TNFRSF6BF6WH68 1400 aa32.18■■■□□ 2.74
LIMD2-206ENST00000578993 MROH2AA6NES4 1674 aa32.18■■■□□ 2.74
LIMD2-206ENST00000578993 CCDC141Q6ZP82 1450 aa32.17■■■□□ 2.74
LIMD2-206ENST00000578993 ILDR1Q86SU0 546 aaPredicted RBP32.15■■■□□ 2.74
LIMD2-206ENST00000578993 CNTLNQ9NXG0 1405 aa32.15■■■□□ 2.74
LIMD2-206ENST00000578993 ARHGEF5Q12774 1597 aa32.15■■■□□ 2.74
LIMD2-206ENST00000578993 CLTCQ00610 1675 aaKnown RBP32.14■■■□□ 2.74
LIMD2-206ENST00000578993 ESF1Q9H501 851 aaKnown RBP32.12■■■□□ 2.73
LIMD2-206ENST00000578993 UHRF1BP1Q6BDS2 1440 aa32.08■■■□□ 2.73
LIMD2-206ENST00000578993 STRCQ7RTU9 1775 aa32.07■■■□□ 2.72
LIMD2-206ENST00000578993 DHX29Q7Z478 1369 aaKnown RBP32.07■■■□□ 2.72
LIMD2-206ENST00000578993 RSPH4AQ5TD94 716 aa32.06■■■□□ 2.72
LIMD2-206ENST00000578993 MYOM3Q5VTT5 1437 aa32.06■■■□□ 2.72
LIMD2-206ENST00000578993 ZMYM3Q14202 1370 aa32.05■■■□□ 2.72
LIMD2-206ENST00000578993 GGT6Q6P531 493 aa32.04■■■□□ 2.72
LIMD2-206ENST00000578993 MIA2Q96PC5 1412 aa32.01■■■□□ 2.72
LIMD2-206ENST00000578993 MAST1Q9Y2H9 1570 aa32■■■□□ 2.71
LIMD2-206ENST00000578993 NPATQ14207 1427 aa31.99■■■□□ 2.71
LIMD2-206ENST00000578993 TSPY4P0CV99 314 aa31.94■■■□□ 2.7
LIMD2-206ENST00000578993 TSPY10P0CW01 314 aa31.94■■■□□ 2.7
LIMD2-206ENST00000578993 PPP6R1Q9UPN7 881 aa31.94■■■□□ 2.7
LIMD2-206ENST00000578993 PTPRKQ15262 1439 aa31.93■■■□□ 2.7
LIMD2-206ENST00000578993 KIF3BO15066 747 aa31.92■■■□□ 2.7
LIMD2-206ENST00000578993 APLP2Q06481 763 aa31.92■■■□□ 2.7
LIMD2-206ENST00000578993 PTPN23Q9H3S7 1636 aa31.91■■■□□ 2.7
LIMD2-206ENST00000578993 MYO3AQ8NEV4 1616 aa31.9■■■□□ 2.7
LIMD2-206ENST00000578993 CROCC2H7BZ55 1655 aa31.89■■■□□ 2.7
LIMD2-206ENST00000578993 ZNF142P52746 1687 aaPredicted RBP31.88■■■□□ 2.69
LIMD2-206ENST00000578993 KDM5DQ9BY66 1539 aa31.85■■■□□ 2.69
LIMD2-206ENST00000578993 RNF17Q9BXT8 1623 aaKnown RBP31.85■■■□□ 2.69
LIMD2-206ENST00000578993 FAM135AQ9P2D6 1515 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms