RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 YEATS2Q9ULM3 1422 aa23.4■■□□□ 1.34
CCDC57-212ENST00000578910 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
CCDC57-212ENST00000578910 POGZQ7Z3K3 1410 aa23.37■■□□□ 1.33
CCDC57-212ENST00000578910 CEP162Q5TB80 1403 aa23.36■■□□□ 1.33
CCDC57-212ENST00000578910 MAGI2Q86UL8 1455 aa23.36■■□□□ 1.33
CCDC57-212ENST00000578910 ZMYM4Q5VZL5 1548 aa23.35■■□□□ 1.33
CCDC57-212ENST00000578910 ADAMTSL3P82987 1691 aa23.34■■□□□ 1.33
CCDC57-212ENST00000578910 ZFYVE16Q7Z3T8 1539 aa23.33■■□□□ 1.33
CCDC57-212ENST00000578910 CDC42BPBQ9Y5S2 1711 aa23.33■■□□□ 1.33
CCDC57-212ENST00000578910 ARHGEF40Q8TER5 1519 aa23.33■■□□□ 1.32
CCDC57-212ENST00000578910 BCORL1Q5H9F3 1711 aa23.31■■□□□ 1.32
CCDC57-212ENST00000578910 MYT1LQ9UL68 1186 aa23.31■■□□□ 1.32
CCDC57-212ENST00000578910 ZNF777Q9ULD5 760 aaPredicted RBP23.31■■□□□ 1.32
CCDC57-212ENST00000578910 MLECQ14165 292 aa23.3■■□□□ 1.32
CCDC57-212ENST00000578910 PTPRMP28827 1452 aa23.3■■□□□ 1.32
CCDC57-212ENST00000578910 ATP10AO60312 1499 aa23.28■■□□□ 1.32
CCDC57-212ENST00000578910 ZNF518AQ6AHZ1 1483 aa23.28■■□□□ 1.32
CCDC57-212ENST00000578910 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
CCDC57-212ENST00000578910 MTUS2Q5JR59 1369 aa23.27■■□□□ 1.32
CCDC57-212ENST00000578910 GPATCH8Q9UKJ3 1502 aaKnown RBP23.26■■□□□ 1.31
CCDC57-212ENST00000578910 PREX2Q70Z35 1606 aa23.26■■□□□ 1.31
CCDC57-212ENST00000578910 TRAPPC8Q9Y2L5 1435 aa23.25■■□□□ 1.31
CCDC57-212ENST00000578910 SIGLEC1Q9BZZ2 1709 aa23.25■■□□□ 1.31
CCDC57-212ENST00000578910 HNRNPMP52272 730 aaKnown RBP eCLIP23.24■■□□□ 1.311e-6■■■■□ 23.2
CCDC57-212ENST00000578910 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
CCDC57-212ENST00000578910 CDC42BPAQ5VT25 1732 aa23.24■■□□□ 1.31
CCDC57-212ENST00000578910 MADDQ8WXG6 1647 aa23.23■■□□□ 1.31
CCDC57-212ENST00000578910 HECW2Q9P2P5 1572 aa23.23■■□□□ 1.31
CCDC57-212ENST00000578910 PLPPR3Q6T4P5 718 aa23.22■■□□□ 1.31
CCDC57-212ENST00000578910 CCNB3Q8WWL7 1395 aa23.22■■□□□ 1.31
CCDC57-212ENST00000578910 KDM5CP41229 1560 aa23.21■■□□□ 1.31
CCDC57-212ENST00000578910 C9orf84Q5VXU9 1444 aa23.2■■□□□ 1.3
CCDC57-212ENST00000578910 ABCC1P33527 1531 aa23.18■■□□□ 1.3
CCDC57-212ENST00000578910 MLH3Q9UHC1 1453 aa23.18■■□□□ 1.3
CCDC57-212ENST00000578910 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
CCDC57-212ENST00000578910 SAMD9LQ8IVG5 1584 aa23.14■■□□□ 1.3
CCDC57-212ENST00000578910 ZNF644Q9H582 1327 aaPredicted RBP23.14■■□□□ 1.3
CCDC57-212ENST00000578910 ITSN2Q9NZM3 1697 aa23.14■■□□□ 1.29
CCDC57-212ENST00000578910 DIP2CQ9Y2E4 1556 aa23.12■■□□□ 1.29
CCDC57-212ENST00000578910 SPAG9O60271 1321 aaKnown RBP23.11■■□□□ 1.29
CCDC57-212ENST00000578910 KIAA1107Q9UPP5 1409 aa23.11■■□□□ 1.29
CCDC57-212ENST00000578910 CEBPAP49715 358 aaPredicted RBP23.11■■□□□ 1.29
CCDC57-212ENST00000578910 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
CCDC57-212ENST00000578910 EHBP1L1Q8N3D4 1523 aa23.1■■□□□ 1.29
CCDC57-212ENST00000578910 SYCP2Q9BX26 1530 aa23.09■■□□□ 1.29
CCDC57-212ENST00000578910 ABCA6Q8N139 1617 aa23.08■■□□□ 1.29
CCDC57-212ENST00000578910 KIDINS220Q9ULH0 1771 aa23.08■■□□□ 1.29
CCDC57-212ENST00000578910 PLEKHH2Q8IVE3 1493 aa23.07■■□□□ 1.28
CCDC57-212ENST00000578910 TIAM1Q13009 1591 aa23.06■■□□□ 1.28
CCDC57-212ENST00000578910 KANK4Q5T7N3 995 aaPredicted RBP23.05■■□□□ 1.28
CCDC57-212ENST00000578910 FER1L4A9Z1Z3 1794 aa23.04■■□□□ 1.28
CCDC57-212ENST00000578910 REREQ9P2R6 1566 aa23.04■■□□□ 1.28
CCDC57-212ENST00000578910 NCOA2Q15596 1464 aa23.04■■□□□ 1.28
CCDC57-212ENST00000578910 HSPA2P54652 639 aa23.03■■□□□ 1.28
CCDC57-212ENST00000578910 AGLP35573 1532 aa23.02■■□□□ 1.28
CCDC57-212ENST00000578910 LMTK3Q96Q04 1460 aa23.01■■□□□ 1.27
CCDC57-212ENST00000578910 ESF1Q9H501 851 aaKnown RBP23.01■■□□□ 1.27
CCDC57-212ENST00000578910 MBD5Q9P267 1494 aa23■■□□□ 1.27
CCDC57-212ENST00000578910 SUPT6HQ7KZ85 1726 aaKnown RBP22.99■■□□□ 1.27
CCDC57-212ENST00000578910 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
CCDC57-212ENST00000578910 ATP7AQ04656 1500 aa22.97■■□□□ 1.27
CCDC57-212ENST00000578910 RSPH4AQ5TD94 716 aa22.95■■□□□ 1.26
CCDC57-212ENST00000578910 MAP3K1Q13233 1512 aa22.93■■□□□ 1.26
CCDC57-212ENST00000578910 GGT6Q6P531 493 aa22.93■■□□□ 1.26
CCDC57-212ENST00000578910 A2MP01023 1474 aa22.92■■□□□ 1.26
CCDC57-212ENST00000578910 APLP2Q06481 763 aa22.92■■□□□ 1.26
CCDC57-212ENST00000578910 RTEL1-TNFRSF6BF6WH68 1400 aa22.91■■□□□ 1.26
CCDC57-212ENST00000578910 ILDR1Q86SU0 546 aaPredicted RBP22.91■■□□□ 1.26
CCDC57-212ENST00000578910 INO80Q9ULG1 1556 aaPredicted RBP22.91■■□□□ 1.26
CCDC57-212ENST00000578910 CAMSAP2Q08AD1 1489 aa22.89■■□□□ 1.25
CCDC57-212ENST00000578910 TSPY4P0CV99 314 aa22.88■■□□□ 1.25
CCDC57-212ENST00000578910 TSPY10P0CW01 314 aa22.88■■□□□ 1.25
CCDC57-212ENST00000578910 SETD1BQ9UPS6 1966 aaKnown RBP22.87■■□□□ 1.25
CCDC57-212ENST00000578910 ZMYM3Q14202 1370 aa22.87■■□□□ 1.25
CCDC57-212ENST00000578910 DHX29Q7Z478 1369 aaKnown RBP22.87■■□□□ 1.25
CCDC57-212ENST00000578910 CNTLNQ9NXG0 1405 aa22.86■■□□□ 1.25
CCDC57-212ENST00000578910 CCDC141Q6ZP82 1450 aa22.85■■□□□ 1.25
CCDC57-212ENST00000578910 C3P01024 1663 aa22.84■■□□□ 1.25
CCDC57-212ENST00000578910 PLXNC1O60486 1568 aa22.84■■□□□ 1.25
CCDC57-212ENST00000578910 PPP6R1Q9UPN7 881 aa22.83■■□□□ 1.25
CCDC57-212ENST00000578910 KIF3BO15066 747 aa22.82■■□□□ 1.24
CCDC57-212ENST00000578910 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
CCDC57-212ENST00000578910 ADGBQ8N7X0 1667 aa22.81■■□□□ 1.24
CCDC57-212ENST00000578910 MYOM3Q5VTT5 1437 aa22.81■■□□□ 1.24
CCDC57-212ENST00000578910 PREX1Q8TCU6 1659 aa22.81■■□□□ 1.24
CCDC57-212ENST00000578910 MIA2Q96PC5 1412 aa22.8■■□□□ 1.24
CCDC57-212ENST00000578910 ARHGEF5Q12774 1597 aa22.78■■□□□ 1.24
CCDC57-212ENST00000578910 CLTCQ00610 1675 aaKnown RBP22.74■■□□□ 1.23
CCDC57-212ENST00000578910 MROH2AA6NES4 1674 aa22.73■■□□□ 1.23
CCDC57-212ENST00000578910 NPATQ14207 1427 aa22.73■■□□□ 1.23
CCDC57-212ENST00000578910 DMRT2Q9Y5R5 561 aa22.72■■□□□ 1.23
CCDC57-212ENST00000578910 WASHC2CQ9Y4E1 1318 aa22.7■■□□□ 1.22
CCDC57-212ENST00000578910 PTPRKQ15262 1439 aa22.7■■□□□ 1.22
CCDC57-212ENST00000578910 FBXO31Q5XUX0 539 aaPredicted RBP22.68■■□□□ 1.22
CCDC57-212ENST00000578910 FBXO41Q8TF61 875 aa22.68■■□□□ 1.22
CCDC57-212ENST00000578910 STRCQ7RTU9 1775 aa22.68■■□□□ 1.22
CCDC57-212ENST00000578910 MAST1Q9Y2H9 1570 aa22.66■■□□□ 1.22
CCDC57-212ENST00000578910 ABCC5O15440 1437 aa22.65■■□□□ 1.22
CCDC57-212ENST00000578910 RRP7BPQ9NSQ0 103 aa22.64■■□□□ 1.21
CCDC57-212ENST00000578910 FGD6Q6ZV73 1430 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms